RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 SMR3BP02814 79 aaPredicted RBP7.13□□□□□ -1.27
AC055713.1-201ENST00000498967 UTP20O75691 2785 aaKnown RBP7.12□□□□□ -1.27
AC055713.1-201ENST00000498967 COL4A2P08572 1712 aa7.12□□□□□ -1.27
AC055713.1-201ENST00000498967 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
AC055713.1-201ENST00000498967 KMT2BQ9UMN6 2715 aaPredicted RBP7.1□□□□□ -1.27
AC055713.1-201ENST00000498967 LINC00612Q8N6U2 182 aa7.09□□□□□ -1.28
AC055713.1-201ENST00000498967 ANAPC11Q9NYG5 84 aa7.08□□□□□ -1.28
AC055713.1-201ENST00000498967 Q5VV11 94 aa7.07□□□□□ -1.28
AC055713.1-201ENST00000498967 SRCAPQ6ZRS2 3230 aa7.05□□□□□ -1.28
AC055713.1-201ENST00000498967 A0A1W2PNN7 141 aa7.03□□□□□ -1.28
AC055713.1-201ENST00000498967 M0QZ58 72 aa7.03□□□□□ -1.28
AC055713.1-201ENST00000498967 KRTAP24-1Q3LI83 254 aa7.03□□□□□ -1.28
AC055713.1-201ENST00000498967 A0A0G2JQZ4 141 aa7.03□□□□□ -1.28
AC055713.1-201ENST00000498967 EP400Q96L91 3159 aa6.98□□□□□ -1.29
AC055713.1-201ENST00000498967 C20orf166-AS1Q96NR2 134 aa6.97□□□□□ -1.29
AC055713.1-201ENST00000498967 ZNF292O60281 2723 aa6.97□□□□□ -1.29
AC055713.1-201ENST00000498967 K7EIL1 84 aa6.97□□□□□ -1.29
AC055713.1-201ENST00000498967 Q5XG85 94 aa6.96□□□□□ -1.3
AC055713.1-201ENST00000498967 GIG44P09565 113 aaPredicted RBP6.96□□□□□ -1.3
AC055713.1-201ENST00000498967 Q5W150 140 aa6.96□□□□□ -1.3
AC055713.1-201ENST00000498967 SPATA8Q6RVD6 105 aa6.96□□□□□ -1.3
AC055713.1-201ENST00000498967 FP248Q71RG6 208 aaPredicted RBP6.95□□□□□ -1.3
AC055713.1-201ENST00000498967 CEP350Q5VT06 3117 aa6.94□□□□□ -1.3
AC055713.1-201ENST00000498967 MMP24-AS1A0A0U1RRL7 71 aa6.94□□□□□ -1.3
AC055713.1-201ENST00000498967 MAP1AP78559 2803 aaPredicted RBP6.93□□□□□ -1.3
AC055713.1-201ENST00000498967 APCP25054 2843 aa6.92□□□□□ -1.3
AC055713.1-201ENST00000498967 Q8NDZ9 215 aa6.89□□□□□ -1.31
AC055713.1-201ENST00000498967 A0A096LNT2 108 aa6.88□□□□□ -1.31
AC055713.1-201ENST00000498967 PANO1I0J062 215 aa6.86□□□□□ -1.31
AC055713.1-201ENST00000498967 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
AC055713.1-201ENST00000498967 KRTAP10-11P60412 298 aa6.84□□□□□ -1.32
AC055713.1-201ENST00000498967 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
AC055713.1-201ENST00000498967 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
AC055713.1-201ENST00000498967 NDUFAF8A1L188 74 aa6.82□□□□□ -1.32
AC055713.1-201ENST00000498967 PLAC8Q9NZF1 115 aa6.82□□□□□ -1.32
AC055713.1-201ENST00000498967 UBR5O95071 2799 aaPredicted RBP6.8□□□□□ -1.32
AC055713.1-201ENST00000498967 SPRR1BP22528 89 aa6.78□□□□□ -1.32
AC055713.1-201ENST00000498967 Q6ZR54 194 aa6.78□□□□□ -1.32
AC055713.1-201ENST00000498967 OXTP01178 125 aa6.77□□□□□ -1.32
AC055713.1-201ENST00000498967 SPRR1AP35321 89 aa6.76□□□□□ -1.33
AC055713.1-201ENST00000498967 TENM3Q9P273 2699 aa6.75□□□□□ -1.33
AC055713.1-201ENST00000498967 TNP1P09430 55 aa6.74□□□□□ -1.33
AC055713.1-201ENST00000498967 A0A087X002 238 aa6.74□□□□□ -1.33
AC055713.1-201ENST00000498967 PP632Q6XCG6 107 aa6.73□□□□□ -1.33
AC055713.1-201ENST00000498967 ITPR1Q14643 2758 aa6.73□□□□□ -1.33
AC055713.1-201ENST00000498967 CASC10Q5T4H9 136 aa6.72□□□□□ -1.33
AC055713.1-201ENST00000498967 PCNTO95613 3336 aa6.71□□□□□ -1.33
AC055713.1-201ENST00000498967 KRTAP10-3P60369 221 aa6.71□□□□□ -1.34
AC055713.1-201ENST00000498967 Q5VSD8 79 aa6.71□□□□□ -1.34
AC055713.1-201ENST00000498967 NBEAL2Q6ZNJ1 2754 aa6.71□□□□□ -1.34
AC055713.1-201ENST00000498967 FLNCQ14315 2725 aa6.7□□□□□ -1.34
AC055713.1-201ENST00000498967 CHD9Q3L8U1 2897 aa6.68□□□□□ -1.34
AC055713.1-201ENST00000498967 A8MUU9 505 aa6.66□□□□□ -1.34
AC055713.1-201ENST00000498967 DSPP15924 2871 aaKnown RBP6.66□□□□□ -1.34
AC055713.1-201ENST00000498967 KRTAP1-3Q8IUG1 177 aa6.66□□□□□ -1.34
AC055713.1-201ENST00000498967 C5orf42Q9H799 3197 aa6.66□□□□□ -1.34
AC055713.1-201ENST00000498967 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.34
AC055713.1-201ENST00000498967 KRTAP1-1Q07627 177 aa6.64□□□□□ -1.35
AC055713.1-201ENST00000498967 TRANK1O15050 2925 aa6.63□□□□□ -1.35
AC055713.1-201ENST00000498967 DNAH12Q6ZR08 3092 aa6.61□□□□□ -1.35
AC055713.1-201ENST00000498967 A6NN06 94 aa6.61□□□□□ -1.35
AC055713.1-201ENST00000498967 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
AC055713.1-201ENST00000498967 CYSTM1Q9H1C7 97 aa6.6□□□□□ -1.35
AC055713.1-201ENST00000498967 KALRNO60229 2985 aa6.58□□□□□ -1.36
AC055713.1-201ENST00000498967 CFAP54Q96N23 3096 aa6.57□□□□□ -1.36
AC055713.1-201ENST00000498967 P0C880 135 aa6.57□□□□□ -1.36
AC055713.1-201ENST00000498967 A0A0C4DFX4 3053 aa6.57□□□□□ -1.36
AC055713.1-201ENST00000498967 RPS29P62273 56 aaKnown RBP6.57□□□□□ -1.36
AC055713.1-201ENST00000498967 GOLGB1Q14789 3259 aaKnown RBP6.56□□□□□ -1.36
AC055713.1-201ENST00000498967 LAMA2P24043 3122 aaKnown RBP6.55□□□□□ -1.36
AC055713.1-201ENST00000498967 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
AC055713.1-201ENST00000498967 NF1P21359 2839 aa6.52□□□□□ -1.37
AC055713.1-201ENST00000498967 LRBAP50851 2863 aa6.52□□□□□ -1.37
AC055713.1-201ENST00000498967 TRIOO75962 3097 aa6.51□□□□□ -1.37
AC055713.1-201ENST00000498967 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
AC055713.1-201ENST00000498967 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
AC055713.1-201ENST00000498967 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
AC055713.1-201ENST00000498967 PDZD2O15018 2839 aa6.44□□□□□ -1.38
AC055713.1-201ENST00000498967 A8MU10 97 aa6.41□□□□□ -1.38
AC055713.1-201ENST00000498967 FRYLO94915 3013 aa6.4□□□□□ -1.39
AC055713.1-201ENST00000498967 HIVEP1P15822 2718 aa6.39□□□□□ -1.39
AC055713.1-201ENST00000498967 FRYQ5TBA9 3013 aa6.39□□□□□ -1.39
AC055713.1-201ENST00000498967 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
AC055713.1-201ENST00000498967 LCE6AA0A183 80 aa6.35□□□□□ -1.39
AC055713.1-201ENST00000498967 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
AC055713.1-201ENST00000498967 ASH1LQ9NR48 2969 aaKnown RBP6.35□□□□□ -1.39
AC055713.1-201ENST00000498967 KRTAP4-16G5E9R7 235 aaPredicted RBP6.33□□□□□ -1.4
AC055713.1-201ENST00000498967 NIPBLQ6KC79 2804 aaeCLIP6.31□□□□□ -1.4
AC055713.1-201ENST00000498967 KRTAP10-1P60331 282 aa6.31□□□□□ -1.4
AC055713.1-201ENST00000498967 KRTAP10-8P60410 259 aa6.3□□□□□ -1.4
AC055713.1-201ENST00000498967 FREM2Q5SZK8 3169 aa6.3□□□□□ -1.4
AC055713.1-201ENST00000498967 CHD7Q9P2D1 2997 aa6.29□□□□□ -1.4
AC055713.1-201ENST00000498967 REV3LO60673 3130 aa6.29□□□□□ -1.4
AC055713.1-201ENST00000498967 KRTAP1-5Q9BYS1 174 aa6.25□□□□□ -1.41
AC055713.1-201ENST00000498967 TGP01266 2768 aa6.25□□□□□ -1.41
AC055713.1-201ENST00000498967 CRYBG3Q68DQ2 2970 aa6.24□□□□□ -1.41
AC055713.1-201ENST00000498967 UTRNP46939 3433 aa6.23□□□□□ -1.41
AC055713.1-201ENST00000498967 Q6ZRN7 208 aaPredicted RBP6.22□□□□□ -1.41
AC055713.1-201ENST00000498967 KRTAP10-2P60368 255 aa6.2□□□□□ -1.42
AC055713.1-201ENST00000498967 MGAQ8IWI9 3026 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 173.9 ms