RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 C3orf22Q8N5N4 141 aa12.35□□□□□ -0.43
LINC01558-202ENST00000495520 IMUPQ9GZP8 106 aa12.32□□□□□ -0.44
LINC01558-202ENST00000495520 FAM30AQ9NZY2 134 aa12.32□□□□□ -0.44
LINC01558-202ENST00000495520 Q6JHZ5 121 aa12.32□□□□□ -0.44
LINC01558-202ENST00000495520 Q6ZSA8 131 aa12.3□□□□□ -0.44
LINC01558-202ENST00000495520 PSORS1C2Q9UIG4 136 aa12.3□□□□□ -0.44
LINC01558-202ENST00000495520 IGLV8-61A0A075B6I0 122 aa12.29□□□□□ -0.44
LINC01558-202ENST00000495520 UBL5Q9BZL1 73 aa12.28□□□□□ -0.44
LINC01558-202ENST00000495520 PKHD1P08F94 4074 aa12.27□□□□□ -0.45
LINC01558-202ENST00000495520 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
LINC01558-202ENST00000495520 A0A1B0GW54 56 aa12.26□□□□□ -0.45
LINC01558-202ENST00000495520 HAMPP81172 84 aa12.26□□□□□ -0.45
LINC01558-202ENST00000495520 CIRBP-AS1Q8TBR5 109 aa12.25□□□□□ -0.45
LINC01558-202ENST00000495520 A0A1W2PNM2 257 aa12.24□□□□□ -0.45
LINC01558-202ENST00000495520 ATP5EP2Q5VTU8 51 aa12.24□□□□□ -0.45
LINC01558-202ENST00000495520 SCXQ7RTU7 201 aa12.23□□□□□ -0.45
LINC01558-202ENST00000495520 DYNC1H1Q14204 4646 aaKnown RBP12.23□□□□□ -0.45
LINC01558-202ENST00000495520 F8WEM9 126 aa12.22□□□□□ -0.45
LINC01558-202ENST00000495520 Q6ZVQ6 151 aa12.22□□□□□ -0.45
LINC01558-202ENST00000495520 ZNF861PO60384 105 aa12.22□□□□□ -0.45
LINC01558-202ENST00000495520 Q8NBF4 154 aa12.22□□□□□ -0.45
LINC01558-202ENST00000495520 LRP1BQ9NZR2 4599 aa12.2□□□□□ -0.46
LINC01558-202ENST00000495520 IGKV3D-7A0A0C4DH55 119 aa12.2□□□□□ -0.46
LINC01558-202ENST00000495520 SPRR4Q96PI1 79 aa12.2□□□□□ -0.46
LINC01558-202ENST00000495520 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
LINC01558-202ENST00000495520 SRRM2Q9UQ35 2752 aaKnown RBP12.17□□□□□ -0.46
LINC01558-202ENST00000495520 IGFL1Q6UW32 110 aa12.17□□□□□ -0.46
LINC01558-202ENST00000495520 IGLV7-43P04211 117 aa12.16□□□□□ -0.46
LINC01558-202ENST00000495520 CRYGAP11844 174 aa12.16□□□□□ -0.46
LINC01558-202ENST00000495520 ZNF706Q9Y5V0 76 aaPredicted RBP12.15□□□□□ -0.46
LINC01558-202ENST00000495520 CXCL6P80162 114 aa12.13□□□□□ -0.47
LINC01558-202ENST00000495520 NREPQ16612 68 aa12.1□□□□□ -0.47
LINC01558-202ENST00000495520 A0A0G2JQZ4 141 aa12.09□□□□□ -0.47
LINC01558-202ENST00000495520 HIST1H4AP62805 103 aaKnown RBP12.09□□□□□ -0.47
LINC01558-202ENST00000495520 EPPK1P58107 5090 aaKnown RBP12.08□□□□□ -0.48
LINC01558-202ENST00000495520 FAM236AA0A1B0GUQ0 79 aa12.06□□□□□ -0.48
LINC01558-202ENST00000495520 FAM236BA0A1B0GV22 79 aa12.06□□□□□ -0.48
LINC01558-202ENST00000495520 APOBP04114 4563 aaKnown RBP12.06□□□□□ -0.48
LINC01558-202ENST00000495520 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
LINC01558-202ENST00000495520 A0A087WVE0 104 aa12.03□□□□□ -0.48
LINC01558-202ENST00000495520 SMR3BP02814 79 aaPredicted RBP12.02□□□□□ -0.49
LINC01558-202ENST00000495520 ANAPC13Q9BS18 74 aa12□□□□□ -0.49
LINC01558-202ENST00000495520 BPY2O14599 106 aa11.98□□□□□ -0.49
LINC01558-202ENST00000495520 IGLV9-49A0A0B4J1Y8 123 aa11.97□□□□□ -0.49
LINC01558-202ENST00000495520 CDK2AP2O75956 126 aa11.97□□□□□ -0.49
LINC01558-202ENST00000495520 A0A087WSZ3 146 aa11.97□□□□□ -0.49
LINC01558-202ENST00000495520 ANAPC11Q9NYG5 84 aa11.97□□□□□ -0.49
LINC01558-202ENST00000495520 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.49
LINC01558-202ENST00000495520 C9orf153Q5TBE3 101 aa11.95□□□□□ -0.5
LINC01558-202ENST00000495520 ATOX1O00244 68 aa11.93□□□□□ -0.5
LINC01558-202ENST00000495520 IGKV4-1P06312 121 aa11.92□□□□□ -0.5
LINC01558-202ENST00000495520 MOBPQ13875 183 aa11.91□□□□□ -0.5
LINC01558-202ENST00000495520 DSCR10P59022 87 aa11.91□□□□□ -0.5
LINC01558-202ENST00000495520 RYR1P21817 5038 aa11.89□□□□□ -0.51
LINC01558-202ENST00000495520 Q8N9L7 120 aa11.88□□□□□ -0.51
LINC01558-202ENST00000495520 LINC00472Q9H8W2 130 aa11.87□□□□□ -0.51
LINC01558-202ENST00000495520 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
LINC01558-202ENST00000495520 FAM229BQ4G0N7 80 aa11.86□□□□□ -0.51
LINC01558-202ENST00000495520 SSBP3-AS1Q7Z2R9 100 aa11.86□□□□□ -0.51
LINC01558-202ENST00000495520 FAT1Q14517 4588 aa11.85□□□□□ -0.51
LINC01558-202ENST00000495520 SVIPQ8NHG7 77 aa11.84□□□□□ -0.51
LINC01558-202ENST00000495520 HSPG2P98160 4391 aa11.84□□□□□ -0.51
LINC01558-202ENST00000495520 FAM229AH3BQW9 127 aa11.84□□□□□ -0.51
LINC01558-202ENST00000495520 KRTAP1-4P0C5Y4 121 aa11.83□□□□□ -0.52
LINC01558-202ENST00000495520 CD164Q04900 197 aa11.81□□□□□ -0.52
LINC01558-202ENST00000495520 PLA2G1BP04054 148 aaKnown RBP11.8□□□□□ -0.52
LINC01558-202ENST00000495520 KRTAP10-4P60372 401 aaPredicted RBP11.8□□□□□ -0.52
LINC01558-202ENST00000495520 Q5VSD8 79 aa11.8□□□□□ -0.52
LINC01558-202ENST00000495520 A0A087X002 238 aa11.79□□□□□ -0.52
LINC01558-202ENST00000495520 CCDC179H3BU77 68 aa11.79□□□□□ -0.52
LINC01558-202ENST00000495520 K7EQZ3 153 aa11.79□□□□□ -0.52
LINC01558-202ENST00000495520 SERP2Q8N6R1 65 aa11.79□□□□□ -0.52
LINC01558-202ENST00000495520 COX7CP15954 63 aa11.78□□□□□ -0.52
LINC01558-202ENST00000495520 DEFB116Q30KQ4 102 aa11.78□□□□□ -0.52
LINC01558-202ENST00000495520 KRTAP13-2Q52LG2 175 aa11.78□□□□□ -0.52
LINC01558-202ENST00000495520 SS18L2Q9UHA2 77 aa11.78□□□□□ -0.52
LINC01558-202ENST00000495520 SPINK6Q6UWN8 80 aa11.78□□□□□ -0.52
LINC01558-202ENST00000495520 HRCT1Q6UXD1 115 aa11.78□□□□□ -0.52
LINC01558-202ENST00000495520 Q96NJ1 140 aa11.78□□□□□ -0.52
LINC01558-202ENST00000495520 J3KT08 172 aa11.76□□□□□ -0.53
LINC01558-202ENST00000495520 UQCRQO14949 82 aa11.76□□□□□ -0.53
LINC01558-202ENST00000495520 SMIM20Q8N5G0 67 aa11.75□□□□□ -0.53
LINC01558-202ENST00000495520 BIRC6Q9NR09 4857 aa11.75□□□□□ -0.53
LINC01558-202ENST00000495520 KRTAP17-1Q9BYP8 105 aa11.75□□□□□ -0.53
LINC01558-202ENST00000495520 Q8N1X5 172 aa11.73□□□□□ -0.53
LINC01558-202ENST00000495520 A8MWP4 228 aa11.72□□□□□ -0.53
LINC01558-202ENST00000495520 TRAV7A0A075B6U4 112 aa11.71□□□□□ -0.53
LINC01558-202ENST00000495520 PRR15Q8IV56 129 aa11.71□□□□□ -0.53
LINC01558-202ENST00000495520 ASB16-AS1Q495Z4 193 aa11.68□□□□□ -0.54
LINC01558-202ENST00000495520 HCG22E2RYF7 251 aa11.67□□□□□ -0.54
LINC01558-202ENST00000495520 Q5XG85 94 aa11.66□□□□□ -0.54
LINC01558-202ENST00000495520 OCR1Q9BZK8 76 aa11.65□□□□□ -0.54
LINC01558-202ENST00000495520 KRTAP29-1A8MX34 341 aaPredicted RBP11.63□□□□□ -0.55
LINC01558-202ENST00000495520 NDUFB1O75438 58 aa11.62□□□□□ -0.55
LINC01558-202ENST00000495520 PKHD1L1Q86WI1 4243 aa11.6□□□□□ -0.55
LINC01558-202ENST00000495520 TYMSOSQ8TAI1 123 aa11.58□□□□□ -0.56
LINC01558-202ENST00000495520 MMP24-AS1A0A0U1RRL7 71 aa11.56□□□□□ -0.56
LINC01558-202ENST00000495520 A0A1B0GVX0 72 aa11.55□□□□□ -0.56
LINC01558-202ENST00000495520 WFDC13Q8IUB5 93 aa11.55□□□□□ -0.56
LINC01558-202ENST00000495520 CASC2Q6XLA1 102 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms