RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SPAG11AQ6PDA7 123 aa9.99□□□□□ -0.81
HDAC6-235ENST00000495515 Q8NBF4 154 aa9.99□□□□□ -0.81
HDAC6-235ENST00000495515 PPDPFLQ8WWR9 84 aa9.99□□□□□ -0.81
HDAC6-235ENST00000495515 Q8N377 158 aa9.98□□□□□ -0.81
HDAC6-235ENST00000495515 FAM218AQ96MZ4 157 aa9.98□□□□□ -0.81
HDAC6-235ENST00000495515 F8WEM9 126 aa9.96□□□□□ -0.82
HDAC6-235ENST00000495515 DNAL4O96015 105 aa9.96□□□□□ -0.82
HDAC6-235ENST00000495515 CLEC2BQ92478 149 aa9.96□□□□□ -0.82
HDAC6-235ENST00000495515 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
HDAC6-235ENST00000495515 HMCN2Q8NDA2 5059 aa9.95□□□□□ -0.82
HDAC6-235ENST00000495515 SNHG12Q9BXW3 62 aa9.93□□□□□ -0.82
HDAC6-235ENST00000495515 H3BQ85 93 aa9.91□□□□□ -0.82
HDAC6-235ENST00000495515 SPINK1P00995 79 aa9.91□□□□□ -0.82
HDAC6-235ENST00000495515 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
HDAC6-235ENST00000495515 TRACP01848 142 aa9.89□□□□□ -0.83
HDAC6-235ENST00000495515 ORMDL1Q9P0S3 153 aa9.89□□□□□ -0.83
HDAC6-235ENST00000495515 LST1O00453 97 aa9.88□□□□□ -0.83
HDAC6-235ENST00000495515 FABP2P12104 132 aa9.87□□□□□ -0.83
HDAC6-235ENST00000495515 NAA38Q9BRA0 125 aaKnown RBP9.87□□□□□ -0.83
HDAC6-235ENST00000495515 RPS29P62273 56 aaKnown RBP9.86□□□□□ -0.83
HDAC6-235ENST00000495515 Q6JHZ5 121 aa9.86□□□□□ -0.83
HDAC6-235ENST00000495515 H3BUT2 72 aa9.85□□□□□ -0.83
HDAC6-235ENST00000495515 ATXN8Q156A1 80 aa9.85□□□□□ -0.83
HDAC6-235ENST00000495515 IGLV8-61A0A075B6I0 122 aa9.84□□□□□ -0.83
HDAC6-235ENST00000495515 C9orf118A6NHY6 69 aa9.84□□□□□ -0.83
HDAC6-235ENST00000495515 PCP4L1A6NKN8 68 aa9.84□□□□□ -0.83
HDAC6-235ENST00000495515 TMEM256-PLSCR3K7ERE1 68 aa9.84□□□□□ -0.83
HDAC6-235ENST00000495515 NDUFV3P56181 108 aaKnown RBP9.84□□□□□ -0.83
HDAC6-235ENST00000495515 CD164Q04900 197 aa9.84□□□□□ -0.83
HDAC6-235ENST00000495515 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
HDAC6-235ENST00000495515 TAX1BP3O14907 124 aa9.82□□□□□ -0.84
HDAC6-235ENST00000495515 TCL1BO95988 128 aa9.81□□□□□ -0.84
HDAC6-235ENST00000495515 COL5A1-AS1Q5SY13 56 aa9.81□□□□□ -0.84
HDAC6-235ENST00000495515 HRCT1Q6UXD1 115 aa9.81□□□□□ -0.84
HDAC6-235ENST00000495515 LIMD2Q9BT23 127 aa9.81□□□□□ -0.84
HDAC6-235ENST00000495515 PRR4Q16378 134 aa9.8□□□□□ -0.84
HDAC6-235ENST00000495515 H3BMG7 143 aa9.79□□□□□ -0.84
HDAC6-235ENST00000495515 UBE2V1Q13404 147 aa9.78□□□□□ -0.84
HDAC6-235ENST00000495515 UBR4Q5T4S7 5183 aa9.78□□□□□ -0.84
HDAC6-235ENST00000495515 A0A1W2PPM0 123 aa9.77□□□□□ -0.85
HDAC6-235ENST00000495515 IGFL1Q6UW32 110 aa9.77□□□□□ -0.85
HDAC6-235ENST00000495515 A0A0G2JQZ4 141 aa9.76□□□□□ -0.85
HDAC6-235ENST00000495515 BAALC-AS2P0C853 105 aa9.76□□□□□ -0.85
HDAC6-235ENST00000495515 RETNLBQ9BQ08 111 aa9.76□□□□□ -0.85
HDAC6-235ENST00000495515 FP248Q71RG6 208 aaPredicted RBP9.73□□□□□ -0.85
HDAC6-235ENST00000495515 ANKRD29Q8N6D5 301 aa9.73□□□□□ -0.85
HDAC6-235ENST00000495515 Q5XG85 94 aa9.72□□□□□ -0.85
HDAC6-235ENST00000495515 TRBV7-7A0A0K0K1E9 115 aa9.7□□□□□ -0.86
HDAC6-235ENST00000495515 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
HDAC6-235ENST00000495515 C9JAW5 83 aa9.69□□□□□ -0.86
HDAC6-235ENST00000495515 TEN1Q86WV5 123 aa9.69□□□□□ -0.86
HDAC6-235ENST00000495515 SPCS1Q9Y6A9 102 aa9.69□□□□□ -0.86
HDAC6-235ENST00000495515 A0A1B0GV72 72 aa9.68□□□□□ -0.86
HDAC6-235ENST00000495515 RBM3P98179 157 aaKnown RBP9.68□□□□□ -0.86
HDAC6-235ENST00000495515 Q6Q795 121 aa9.68□□□□□ -0.86
HDAC6-235ENST00000495515 JMJD7-PLA2G4BH0Y9G9 81 aa9.66□□□□□ -0.86
HDAC6-235ENST00000495515 DSCR8Q96T75 97 aa9.66□□□□□ -0.86
HDAC6-235ENST00000495515 H3BT86 120 aa9.64□□□□□ -0.87
HDAC6-235ENST00000495515 SS18L2Q9UHA2 77 aa9.64□□□□□ -0.87
HDAC6-235ENST00000495515 ASB16-AS1Q495Z4 193 aa9.62□□□□□ -0.87
HDAC6-235ENST00000495515 TRBV7-4A0A0J9YYF1 115 aa9.61□□□□□ -0.87
HDAC6-235ENST00000495515 A0A1W2PNM2 257 aa9.61□□□□□ -0.87
HDAC6-235ENST00000495515 CCKP06307 115 aa9.61□□□□□ -0.87
HDAC6-235ENST00000495515 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
HDAC6-235ENST00000495515 LRP2P98164 4655 aa9.6□□□□□ -0.87
HDAC6-235ENST00000495515 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
HDAC6-235ENST00000495515 A0A087WSZ3 146 aa9.59□□□□□ -0.87
HDAC6-235ENST00000495515 K7EP34 96 aa9.59□□□□□ -0.87
HDAC6-235ENST00000495515 PDE6GP18545 87 aa9.58□□□□□ -0.88
HDAC6-235ENST00000495515 GTF2H5Q6ZYL4 71 aa9.58□□□□□ -0.88
HDAC6-235ENST00000495515 VPS25Q9BRG1 176 aa9.57□□□□□ -0.88
HDAC6-235ENST00000495515 C21orf62-AS1Q17RA5 79 aa9.56□□□□□ -0.88
HDAC6-235ENST00000495515 MTURNQ8N3F0 131 aa9.56□□□□□ -0.88
HDAC6-235ENST00000495515 CDIP1Q9H305 208 aa9.56□□□□□ -0.88
HDAC6-235ENST00000495515 LOC110117498A0A087WWA1 95 aa9.54□□□□□ -0.88
HDAC6-235ENST00000495515 OBSCN-AS1Q96MR7 158 aa9.54□□□□□ -0.88
HDAC6-235ENST00000495515 KRTAP13-3Q3SY46 172 aa9.53□□□□□ -0.88
HDAC6-235ENST00000495515 C14orf132Q9NPU4 83 aa9.52□□□□□ -0.89
HDAC6-235ENST00000495515 Q6ZQT0 140 aa9.51□□□□□ -0.89
HDAC6-235ENST00000495515 A0A1B0GW54 56 aa9.5□□□□□ -0.89
HDAC6-235ENST00000495515 RNF213Q63HN8 5207 aa9.49□□□□□ -0.89
HDAC6-235ENST00000495515 PRO0461Q9UI25 63 aa9.47□□□□□ -0.89
HDAC6-235ENST00000495515 SMCPP49901 116 aaPredicted RBP9.46□□□□□ -0.9
HDAC6-235ENST00000495515 F8W1H4 67 aa9.45□□□□□ -0.9
HDAC6-235ENST00000495515 LPAP08519 4548 aa9.43□□□□□ -0.9
HDAC6-235ENST00000495515 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
HDAC6-235ENST00000495515 Q96NJ1 140 aa9.42□□□□□ -0.9
HDAC6-235ENST00000495515 SIGMAR1Q99720 223 aa9.41□□□□□ -0.9
HDAC6-235ENST00000495515 IGKV4-1P06312 121 aa9.4□□□□□ -0.9
HDAC6-235ENST00000495515 LINC00472Q9H8W2 130 aa9.4□□□□□ -0.9
HDAC6-235ENST00000495515 XP32Q5T750 250 aa9.38□□□□□ -0.91
HDAC6-235ENST00000495515 J3KT08 172 aa9.37□□□□□ -0.91
HDAC6-235ENST00000495515 NREPQ16612 68 aa9.35□□□□□ -0.91
HDAC6-235ENST00000495515 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
HDAC6-235ENST00000495515 SEC61BP60468 96 aaKnown RBP9.34□□□□□ -0.91
HDAC6-235ENST00000495515 ETDBQ3ZM63 59 aa9.32□□□□□ -0.92
HDAC6-235ENST00000495515 A0A1B0GV90 55 aa9.3□□□□□ -0.92
HDAC6-235ENST00000495515 NDUFB1O75438 58 aa9.29□□□□□ -0.92
HDAC6-235ENST00000495515 IGHV6-1A0A0B4J1U7 121 aa9.27□□□□□ -0.93
HDAC6-235ENST00000495515 LINC00313P59037 77 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms