RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 IGLV5-48A0A075B6I7 105 aa6.41□□□□□ -1.38
APTX-230ENST00000494649 NAA38Q9BRA0 125 aaKnown RBP6.4□□□□□ -1.38
APTX-230ENST00000494649 H0YGX0 51 aa6.39□□□□□ -1.39
APTX-230ENST00000494649 LRP2P98164 4655 aa6.39□□□□□ -1.39
APTX-230ENST00000494649 M0R143 59 aa6.38□□□□□ -1.39
APTX-230ENST00000494649 SSBP3-AS1Q7Z2R9 100 aa6.38□□□□□ -1.39
APTX-230ENST00000494649 PCP4L1A6NKN8 68 aa6.38□□□□□ -1.39
APTX-230ENST00000494649 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
APTX-230ENST00000494649 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
APTX-230ENST00000494649 SCGB1C2P0DMR2 95 aa6.36□□□□□ -1.39
APTX-230ENST00000494649 SPAG11AQ6PDA7 123 aa6.36□□□□□ -1.39
APTX-230ENST00000494649 A0A1B0GV72 72 aa6.35□□□□□ -1.39
APTX-230ENST00000494649 F8WEM9 126 aa6.35□□□□□ -1.39
APTX-230ENST00000494649 SNCGO76070 127 aa6.35□□□□□ -1.39
APTX-230ENST00000494649 SPINK1P00995 79 aa6.35□□□□□ -1.39
APTX-230ENST00000494649 COX6CP09669 75 aa6.35□□□□□ -1.39
APTX-230ENST00000494649 SNHG12Q9BXW3 62 aa6.35□□□□□ -1.39
APTX-230ENST00000494649 H3BUT2 72 aa6.34□□□□□ -1.39
APTX-230ENST00000494649 FABP2P12104 132 aa6.34□□□□□ -1.4
APTX-230ENST00000494649 DNAL4O96015 105 aa6.33□□□□□ -1.4
APTX-230ENST00000494649 OCIAD2Q56VL3 154 aa6.3□□□□□ -1.4
APTX-230ENST00000494649 A0A1B0GX51 115 aa6.3□□□□□ -1.4
APTX-230ENST00000494649 IGFL1Q6UW32 110 aa6.3□□□□□ -1.4
APTX-230ENST00000494649 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
APTX-230ENST00000494649 NDUFV3P56181 108 aaKnown RBP6.29□□□□□ -1.4
APTX-230ENST00000494649 ORMDL1Q9P0S3 153 aa6.29□□□□□ -1.4
APTX-230ENST00000494649 LST1O00453 97 aa6.28□□□□□ -1.4
APTX-230ENST00000494649 TCL1BO95988 128 aa6.28□□□□□ -1.4
APTX-230ENST00000494649 PPDPFLQ8WWR9 84 aa6.28□□□□□ -1.4
APTX-230ENST00000494649 H3BMG7 143 aa6.27□□□□□ -1.41
APTX-230ENST00000494649 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
APTX-230ENST00000494649 IGLV8-61A0A075B6I0 122 aa6.26□□□□□ -1.41
APTX-230ENST00000494649 LIMD2Q9BT23 127 aa6.26□□□□□ -1.41
APTX-230ENST00000494649 RNF213Q63HN8 5207 aa6.25□□□□□ -1.41
APTX-230ENST00000494649 TAX1BP3O14907 124 aa6.25□□□□□ -1.41
APTX-230ENST00000494649 TRACP01848 142 aa6.25□□□□□ -1.41
APTX-230ENST00000494649 Q6JHZ5 121 aa6.25□□□□□ -1.41
APTX-230ENST00000494649 CD164Q04900 197 aa6.24□□□□□ -1.41
APTX-230ENST00000494649 ATXN8Q156A1 80 aa6.24□□□□□ -1.41
APTX-230ENST00000494649 TMEM256-PLSCR3K7ERE1 68 aa6.23□□□□□ -1.41
APTX-230ENST00000494649 GHRHP01286 108 aa6.23□□□□□ -1.41
APTX-230ENST00000494649 C9orf118A6NHY6 69 aa6.22□□□□□ -1.41
APTX-230ENST00000494649 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
APTX-230ENST00000494649 TRBV7-7A0A0K0K1E9 115 aa6.22□□□□□ -1.41
APTX-230ENST00000494649 BAALC-AS2P0C853 105 aa6.22□□□□□ -1.41
APTX-230ENST00000494649 FP248Q71RG6 208 aaPredicted RBP6.21□□□□□ -1.41
APTX-230ENST00000494649 MTURNQ8N3F0 131 aa6.21□□□□□ -1.41
APTX-230ENST00000494649 A0A1W2PPM0 123 aa6.2□□□□□ -1.42
APTX-230ENST00000494649 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
APTX-230ENST00000494649 ANKRD29Q8N6D5 301 aa6.2□□□□□ -1.42
APTX-230ENST00000494649 C1orf195Q5TG92 126 aa6.19□□□□□ -1.42
APTX-230ENST00000494649 C9JAW5 83 aa6.19□□□□□ -1.42
APTX-230ENST00000494649 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
APTX-230ENST00000494649 LYRM7Q5U5X0 104 aa6.19□□□□□ -1.42
APTX-230ENST00000494649 A0A087WSZ3 146 aa6.18□□□□□ -1.42
APTX-230ENST00000494649 A0A1W2PNM2 257 aa6.18□□□□□ -1.42
APTX-230ENST00000494649 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
APTX-230ENST00000494649 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
APTX-230ENST00000494649 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
APTX-230ENST00000494649 TEN1Q86WV5 123 aa6.18□□□□□ -1.42
APTX-230ENST00000494649 MUC2Q02817 5179 aa6.18□□□□□ -1.42
APTX-230ENST00000494649 COL5A1-AS1Q5SY13 56 aa6.17□□□□□ -1.42
APTX-230ENST00000494649 Q5XG85 94 aa6.17□□□□□ -1.42
APTX-230ENST00000494649 TRBV20-1A0A075B6N2 111 aa6.16□□□□□ -1.42
APTX-230ENST00000494649 H3BQ85 93 aa6.16□□□□□ -1.42
APTX-230ENST00000494649 CCKP06307 115 aa6.16□□□□□ -1.42
APTX-230ENST00000494649 RBM3P98179 157 aaKnown RBP6.16□□□□□ -1.42
APTX-230ENST00000494649 SPCS1Q9Y6A9 102 aa6.14□□□□□ -1.43
APTX-230ENST00000494649 DSCR8Q96T75 97 aa6.14□□□□□ -1.43
APTX-230ENST00000494649 Q6Q795 121 aa6.13□□□□□ -1.43
APTX-230ENST00000494649 TRBV7-4A0A0J9YYF1 115 aa6.13□□□□□ -1.43
APTX-230ENST00000494649 C14orf132Q9NPU4 83 aa6.12□□□□□ -1.43
APTX-230ENST00000494649 DEFB116Q30KQ4 102 aa6.11□□□□□ -1.43
APTX-230ENST00000494649 XP32Q5T750 250 aa6.11□□□□□ -1.43
APTX-230ENST00000494649 SS18L2Q9UHA2 77 aa6.11□□□□□ -1.43
APTX-230ENST00000494649 ASB16-AS1Q495Z4 193 aa6.1□□□□□ -1.43
APTX-230ENST00000494649 JMJD7-PLA2G4BH0Y9G9 81 aa6.08□□□□□ -1.44
APTX-230ENST00000494649 Q96NJ1 140 aa6.08□□□□□ -1.44
APTX-230ENST00000494649 Q6ZQT0 140 aa6.07□□□□□ -1.44
APTX-230ENST00000494649 H3BT86 120 aa6.06□□□□□ -1.44
APTX-230ENST00000494649 K7EP34 96 aa6.06□□□□□ -1.44
APTX-230ENST00000494649 SIGMAR1Q99720 223 aa6.06□□□□□ -1.44
APTX-230ENST00000494649 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
APTX-230ENST00000494649 OBSCN-AS1Q96MR7 158 aa6.06□□□□□ -1.44
APTX-230ENST00000494649 A0A1B0GV90 55 aa6.05□□□□□ -1.44
APTX-230ENST00000494649 IGKV4-1P06312 121 aa6.05□□□□□ -1.44
APTX-230ENST00000494649 LOC110117498A0A087WWA1 95 aa6.04□□□□□ -1.44
APTX-230ENST00000494649 MUC17Q685J3 4493 aa6.02□□□□□ -1.45
APTX-230ENST00000494649 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
APTX-230ENST00000494649 PRO0461Q9UI25 63 aa6.02□□□□□ -1.45
APTX-230ENST00000494649 DSCR10P59022 87 aa6.02□□□□□ -1.45
APTX-230ENST00000494649 PCOTHQ58A44 107 aa6□□□□□ -1.45
APTX-230ENST00000494649 GTF2H5Q6ZYL4 71 aa6□□□□□ -1.45
APTX-230ENST00000494649 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
APTX-230ENST00000494649 KRTAP4-1Q9BYQ7 146 aa6□□□□□ -1.45
APTX-230ENST00000494649 PDE6GP18545 87 aa5.99□□□□□ -1.45
APTX-230ENST00000494649 IGHV6-1A0A0B4J1U7 121 aa5.98□□□□□ -1.45
APTX-230ENST00000494649 NOTCH2NLQ7Z3S9 236 aa5.98□□□□□ -1.45
APTX-230ENST00000494649 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
APTX-230ENST00000494649 NREPQ16612 68 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 354.8 ms