RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	KRTAP11-1	Q8IUC1	163 aa		11.5	□□□□□ -0.57
ABCA2-222	ENST00000494046	KCNQ1DN	Q9H478	68 aa		11.49	□□□□□ -0.57
ABCA2-222	ENST00000494046	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	11.49	□□□□□ -0.57
ABCA2-222	ENST00000494046		Q6ZQY7	126 aa		11.49	□□□□□ -0.57
ABCA2-222	ENST00000494046	KRTAP7-1	Q8IUC3	87 aa		11.49	□□□□□ -0.57
ABCA2-222	ENST00000494046	GHRH	P01286	108 aa		11.48	□□□□□ -0.57
ABCA2-222	ENST00000494046	KRTAP10-8	P60410	259 aa		11.48	□□□□□ -0.57
ABCA2-222	ENST00000494046	PRY	O14603	147 aa		11.44	□□□□□ -0.58
ABCA2-222	ENST00000494046	IGLV7-43	P04211	117 aa		11.44	□□□□□ -0.58
ABCA2-222	ENST00000494046		A0A1B0GV72	72 aa		11.43	□□□□□ -0.58
ABCA2-222	ENST00000494046	CCK	P06307	115 aa		11.43	□□□□□ -0.58
ABCA2-222	ENST00000494046		Q6Q795	121 aa		11.43	□□□□□ -0.58
ABCA2-222	ENST00000494046	IGLV1-50	A0A075B6I6	118 aa		11.42	□□□□□ -0.58
ABCA2-222	ENST00000494046	UBE2B	P63146	152 aa		11.42	□□□□□ -0.58
ABCA2-222	ENST00000494046	LINC00643	Q86TS7	51 aa		11.42	□□□□□ -0.58
ABCA2-222	ENST00000494046	LAMTOR3	Q9UHA4	124 aa		11.42	□□□□□ -0.58
ABCA2-222	ENST00000494046	SMCR5	Q8TEV8	140 aa		11.42	□□□□□ -0.58
ABCA2-222	ENST00000494046	MRPL55	Q7Z7F7	128 aa	Known RBP	11.41	□□□□□ -0.58
ABCA2-222	ENST00000494046	RBM3	P98179	157 aa	Known RBP	11.4	□□□□□ -0.58
ABCA2-222	ENST00000494046	LRP2	P98164	4655 aa		11.39	□□□□□ -0.59
ABCA2-222	ENST00000494046	RPL37AP8	A6NKH3	93 aa		11.38	□□□□□ -0.59
ABCA2-222	ENST00000494046	SPRR1A	P35321	89 aa		11.38	□□□□□ -0.59
ABCA2-222	ENST00000494046	LOC110117498	A0A087WWA1	95 aa		11.37	□□□□□ -0.59
ABCA2-222	ENST00000494046	TRBV7-7	A0A0K0K1E9	115 aa		11.37	□□□□□ -0.59
ABCA2-222	ENST00000494046	ETDC	A0A1B0GVM5	59 aa		11.36	□□□□□ -0.59
ABCA2-222	ENST00000494046	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.36	□□□□□ -0.59
ABCA2-222	ENST00000494046	DHRS4-AS1	Q9P1J3	65 aa		11.36	□□□□□ -0.59
ABCA2-222	ENST00000494046		B5MCH6	92 aa		11.35	□□□□□ -0.59
ABCA2-222	ENST00000494046		H0Y9J4	135 aa		11.35	□□□□□ -0.59
ABCA2-222	ENST00000494046	LINC00846	Q9NV44	126 aa		11.35	□□□□□ -0.59
ABCA2-222	ENST00000494046	PDE6G	P18545	87 aa		11.35	□□□□□ -0.59
ABCA2-222	ENST00000494046		Q6ZRX8	168 aa		11.35	□□□□□ -0.59
ABCA2-222	ENST00000494046	PRR26	Q8N8Z3	221 aa		11.35	□□□□□ -0.59
ABCA2-222	ENST00000494046	IMUP	Q9GZP8	106 aa		11.35	□□□□□ -0.59
ABCA2-222	ENST00000494046		Q6ZQT0	140 aa		11.34	□□□□□ -0.59
ABCA2-222	ENST00000494046	DSCR8	Q96T75	97 aa		11.34	□□□□□ -0.59
ABCA2-222	ENST00000494046	NDUFV3	P56181	108 aa	Known RBP	11.32	□□□□□ -0.6
ABCA2-222	ENST00000494046		Q6JHZ5	121 aa		11.29	□□□□□ -0.6
ABCA2-222	ENST00000494046	TRBV7-4	A0A0J9YYF1	115 aa		11.28	□□□□□ -0.6
ABCA2-222	ENST00000494046	KRTAP1-4	P0C5Y4	121 aa		11.28	□□□□□ -0.6
ABCA2-222	ENST00000494046		Q9BRP9	147 aa		11.28	□□□□□ -0.6
ABCA2-222	ENST00000494046	ZNF861P	O60384	105 aa		11.25	□□□□□ -0.61
ABCA2-222	ENST00000494046		Q8N377	158 aa		11.25	□□□□□ -0.61
ABCA2-222	ENST00000494046	LINC01547	P58512	204 aa	Predicted RBP	11.24	□□□□□ -0.61
ABCA2-222	ENST00000494046	UBL5	Q9BZL1	73 aa		11.24	□□□□□ -0.61
ABCA2-222	ENST00000494046	RNF213	Q63HN8	5207 aa		11.24	□□□□□ -0.61
ABCA2-222	ENST00000494046	DEFB105A	Q8NG35	78 aa		11.24	□□□□□ -0.61
ABCA2-222	ENST00000494046	ANAPC13	Q9BS18	74 aa		11.23	□□□□□ -0.61
ABCA2-222	ENST00000494046	IGLV5-48	A0A075B6I7	105 aa		11.21	□□□□□ -0.61
ABCA2-222	ENST00000494046	IGKV3D-7	A0A0C4DH55	119 aa		11.21	□□□□□ -0.61
ABCA2-222	ENST00000494046	ATP5EP2	Q5VTU8	51 aa		11.21	□□□□□ -0.61
ABCA2-222	ENST00000494046	LPA	P08519	4548 aa		11.2	□□□□□ -0.62
ABCA2-222	ENST00000494046	BCE1	O60756	84 aa		11.2	□□□□□ -0.62
ABCA2-222	ENST00000494046	FAM19A1	Q7Z5A9	133 aa		11.2	□□□□□ -0.62
ABCA2-222	ENST00000494046	ERC2-IT1	O76042	136 aa		11.19	□□□□□ -0.62
ABCA2-222	ENST00000494046	ST20-AS1	Q8NBB2	130 aa		11.18	□□□□□ -0.62
ABCA2-222	ENST00000494046	FAM236A	A0A1B0GUQ0	79 aa		11.17	□□□□□ -0.62
ABCA2-222	ENST00000494046	FAM236B	A0A1B0GV22	79 aa		11.17	□□□□□ -0.62
ABCA2-222	ENST00000494046		Q6ZVQ6	151 aa		11.14	□□□□□ -0.63
ABCA2-222	ENST00000494046	PRLH	P81277	87 aa		11.13	□□□□□ -0.63
ABCA2-222	ENST00000494046	UBE2A	P49459	152 aa		11.12	□□□□□ -0.63
ABCA2-222	ENST00000494046	C3orf22	Q8N5N4	141 aa		11.12	□□□□□ -0.63
ABCA2-222	ENST00000494046	ANAPC11	Q9NYG5	84 aa		11.12	□□□□□ -0.63
ABCA2-222	ENST00000494046		A0A087X002	238 aa		11.11	□□□□□ -0.63
ABCA2-222	ENST00000494046	HIGD2A	Q9BW72	106 aa		11.1	□□□□□ -0.63
ABCA2-222	ENST00000494046	HIST1H4A	P62805	103 aa	Known RBP	11.09	□□□□□ -0.63
ABCA2-222	ENST00000494046	KRTAP13-1	Q8IUC0	172 aa		11.09	□□□□□ -0.63
ABCA2-222	ENST00000494046		A0A1B0GW54	56 aa		11.08	□□□□□ -0.64
ABCA2-222	ENST00000494046	SMIM29	Q86T20	159 aa		11.07	□□□□□ -0.64
ABCA2-222	ENST00000494046		F8WEM9	126 aa		11.06	□□□□□ -0.64
ABCA2-222	ENST00000494046	CRYGA	P11844	174 aa		11.06	□□□□□ -0.64
ABCA2-222	ENST00000494046		A0A087WVE0	104 aa		11.06	□□□□□ -0.64
ABCA2-222	ENST00000494046	CXCL6	P80162	114 aa		11.06	□□□□□ -0.64
ABCA2-222	ENST00000494046	PRR4	Q16378	134 aa		11.06	□□□□□ -0.64
ABCA2-222	ENST00000494046	TYMSOS	Q8TAI1	123 aa		11.05	□□□□□ -0.64
ABCA2-222	ENST00000494046	ATOX1	O00244	68 aa		11.04	□□□□□ -0.64
ABCA2-222	ENST00000494046		A0A1W2PNM2	257 aa		11.02	□□□□□ -0.64
ABCA2-222	ENST00000494046		Q8NBF4	154 aa		11.02	□□□□□ -0.64
ABCA2-222	ENST00000494046	SPRR1B	P22528	89 aa		11.02	□□□□□ -0.65
ABCA2-222	ENST00000494046	NREP	Q16612	68 aa		11.02	□□□□□ -0.65
ABCA2-222	ENST00000494046	KRTAP13-2	Q52LG2	175 aa		11.02	□□□□□ -0.65
ABCA2-222	ENST00000494046	IGLV8-61	A0A075B6I0	122 aa		10.99	□□□□□ -0.65
ABCA2-222	ENST00000494046	SPRR4	Q96PI1	79 aa		10.99	□□□□□ -0.65
ABCA2-222	ENST00000494046	CCDC179	H3BU77	68 aa		10.98	□□□□□ -0.65
ABCA2-222	ENST00000494046	FAM229B	Q4G0N7	80 aa		10.95	□□□□□ -0.66
ABCA2-222	ENST00000494046	IGFL1	Q6UW32	110 aa		10.95	□□□□□ -0.66
ABCA2-222	ENST00000494046	COX7C	P15954	63 aa		10.92	□□□□□ -0.66
ABCA2-222	ENST00000494046	BPY2	O14599	106 aa		10.91	□□□□□ -0.66
ABCA2-222	ENST00000494046	UQCRQ	O14949	82 aa		10.91	□□□□□ -0.66
ABCA2-222	ENST00000494046	LINC00304	Q8N9R0	145 aa		10.91	□□□□□ -0.66
ABCA2-222	ENST00000494046	RETNLB	Q9BQ08	111 aa		10.9	□□□□□ -0.66
ABCA2-222	ENST00000494046	SERP2	Q8N6R1	65 aa		10.89	□□□□□ -0.67
ABCA2-222	ENST00000494046	MUC2	Q02817	5179 aa		10.86	□□□□□ -0.67
ABCA2-222	ENST00000494046		A0A0G2JQZ4	141 aa		10.86	□□□□□ -0.67
ABCA2-222	ENST00000494046	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.86	□□□□□ -0.67
ABCA2-222	ENST00000494046	IGKV4-1	P06312	121 aa		10.85	□□□□□ -0.67
ABCA2-222	ENST00000494046	LINC00483	Q53H64	154 aa		10.84	□□□□□ -0.67
ABCA2-222	ENST00000494046	C9orf153	Q5TBE3	101 aa		10.84	□□□□□ -0.67
ABCA2-222	ENST00000494046	SMIM20	Q8N5G0	67 aa		10.82	□□□□□ -0.68
ABCA2-222	ENST00000494046		Q8N9L7	120 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms