RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ATMQ13315 3056 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 NBEAQ8NFP9 2946 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 LOC400499M0QZD8 3231 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 B4DSR2 109 aa1.6□□□□□ -2.15
UBXN4-208ENST00000490163 ZNF469Q96JG9 3925 aaPredicted RBP1.6□□□□□ -2.15
UBXN4-208ENST00000490163 EP300Q09472 2414 aaPredicted RBP1.6□□□□□ -2.15
UBXN4-208ENST00000490163 H3BUA1 57 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 DEFB113Q30KQ7 82 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 C1orf134Q5TEV5 83 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 ANKRD17O75179 2603 aaKnown RBP1.59□□□□□ -2.15
UBXN4-208ENST00000490163 LINC00959A0A1B0GUT2 108 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 IGLV7-43P04211 117 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 DEFB131AP59861 70 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 WFDC10BQ8IUB3 73 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 LAMA5O15230 3695 aa1.59□□□□□ -2.15
UBXN4-208ENST00000490163 PIEZO1Q92508 2521 aa1.59□□□□□ -2.16
UBXN4-208ENST00000490163 SPG11Q96JI7 2443 aa1.59□□□□□ -2.16
UBXN4-208ENST00000490163 K7EQZ3 153 aa1.59□□□□□ -2.16
UBXN4-208ENST00000490163 IGLV6-57P01721 117 aa1.59□□□□□ -2.16
UBXN4-208ENST00000490163 C5orf56Q8N8D9 126 aa1.59□□□□□ -2.16
UBXN4-208ENST00000490163 DMXL2Q8TDJ6 3036 aa1.59□□□□□ -2.16
UBXN4-208ENST00000490163 CFAP46Q8IYW2 2715 aa1.59□□□□□ -2.16
UBXN4-208ENST00000490163 ANKRD11Q6UB99 2663 aaPredicted RBP1.58□□□□□ -2.16
UBXN4-208ENST00000490163 RIF1Q5UIP0 2472 aaKnown RBP1.58□□□□□ -2.16
UBXN4-208ENST00000490163 CSAG1Q6PB30 78 aa1.58□□□□□ -2.16
UBXN4-208ENST00000490163 DEFB105AQ8NG35 78 aa1.58□□□□□ -2.16
UBXN4-208ENST00000490163 IGLV1-51P01701 117 aa1.58□□□□□ -2.16
UBXN4-208ENST00000490163 CLPSL2Q6UWE3 100 aa1.58□□□□□ -2.16
UBXN4-208ENST00000490163 CCL19Q99731 98 aa1.58□□□□□ -2.16
UBXN4-208ENST00000490163 DNAH1Q9P2D7 4330 aa1.58□□□□□ -2.16
UBXN4-208ENST00000490163 TTC28Q96AY4 2481 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 PIEZO2Q9H5I5 2752 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 ZZEF1O43149 2961 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 A0A1W2PNM2 257 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 C1orf137Q5JT78 98 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 NBASA2RRP1 2371 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 PKD1L2Q7Z442 2459 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 IGKV2D-24A0A075B6R9 120 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 HRES1P13985 223 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 CNBPP62633 177 aaKnown RBP1.57□□□□□ -2.16
UBXN4-208ENST00000490163 LY6EQ16553 131 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 PCOTHQ58A44 107 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 LCE1EQ5T753 118 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 PLAC8Q9NZF1 115 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 DCHS2Q6V1P9 2916 aa1.57□□□□□ -2.16
UBXN4-208ENST00000490163 ANKHD1Q8IWZ3 2542 aaKnown RBP1.56□□□□□ -2.16
UBXN4-208ENST00000490163 RTL8CO15255 209 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 UNQ6190/PRO20217Q6UXQ8 127 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 C9orf163Q8N9P6 203 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 KRTAP4-4Q9BYR3 166 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 DNAH7Q8WXX0 4024 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 OBSCNQ5VST9 7968 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 IGLV10-54A0A075B6I4 117 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 BRD3OSQ6XYD6 125 aa1.56□□□□□ -2.16
UBXN4-208ENST00000490163 NOP10Q9NPE3 64 aaKnown RBP1.56□□□□□ -2.16
UBXN4-208ENST00000490163 IGLV5-48A0A075B6I7 105 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 MSMBP08118 114 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 ROMO1P60602 79 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 MIR22HGQ0VDD5 57 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 MGAQ8IWI9 3026 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 CUBNO60494 3623 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 ALMS1Q8TCU4 4167 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 ANGP03950 147 aaKnown RBP1.55□□□□□ -2.16
UBXN4-208ENST00000490163 P0C880 135 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 RELNP78509 3460 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 A0A1B0GU69 56 aa1.55□□□□□ -2.16
UBXN4-208ENST00000490163 ZFHX2Q9C0A1 2572 aaPredicted RBP1.54□□□□□ -2.16
UBXN4-208ENST00000490163 H3BUX3 64 aa1.54□□□□□ -2.16
UBXN4-208ENST00000490163 DOPEY1Q5JWR5 2465 aa1.54□□□□□ -2.16
UBXN4-208ENST00000490163 UQCR11O14957 56 aa1.54□□□□□ -2.16
UBXN4-208ENST00000490163 KRTAP10-5P60370 271 aa1.54□□□□□ -2.16
UBXN4-208ENST00000490163 SPRR4Q96PI1 79 aa1.54□□□□□ -2.16
UBXN4-208ENST00000490163 SVEP1Q4LDE5 3571 aa1.54□□□□□ -2.16
UBXN4-208ENST00000490163 CSPG4Q6UVK1 2322 aa1.54□□□□□ -2.16
UBXN4-208ENST00000490163 MYO18BQ8IUG5 2567 aa1.53□□□□□ -2.16
UBXN4-208ENST00000490163 SPATA8Q6RVD6 105 aa1.53□□□□□ -2.16
UBXN4-208ENST00000490163 PRKDCP78527 4128 aaKnown RBP1.53□□□□□ -2.16
UBXN4-208ENST00000490163 DEFB131BA0A096LNP1 70 aa1.53□□□□□ -2.16
UBXN4-208ENST00000490163 GVQW2A0A096LPI5 108 aaPredicted RBP1.53□□□□□ -2.16
UBXN4-208ENST00000490163 ZNF462Q96JM2 2506 aa1.53□□□□□ -2.16
UBXN4-208ENST00000490163 HIVEP3Q5T1R4 2406 aa1.53□□□□□ -2.16
UBXN4-208ENST00000490163 KRTAP10-3P60369 221 aa1.53□□□□□ -2.17
UBXN4-208ENST00000490163 SPINT4Q6UDR6 99 aa1.53□□□□□ -2.17
UBXN4-208ENST00000490163 TP53AIP1Q9HCN2 124 aa1.53□□□□□ -2.17
UBXN4-208ENST00000490163 R4GN34 69 aa1.53□□□□□ -2.17
UBXN4-208ENST00000490163 IGF2RP11717 2491 aa1.53□□□□□ -2.17
UBXN4-208ENST00000490163 PRRC2CQ9Y520 2896 aaKnown RBP1.52□□□□□ -2.17
UBXN4-208ENST00000490163 DEFB130BP0DP73 79 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 DEFB130AP0DP74 79 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 KRTAP10-8P60410 259 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 DEFB136Q30KP8 78 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 LCE3CQ5T5A8 94 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 C6orf48Q9UBA6 75 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 OTOGQ6ZRI0 2925 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 TLN1Q9Y490 2541 aaKnown RBP1.52□□□□□ -2.17
UBXN4-208ENST00000490163 BOD1L1Q8NFC6 3051 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 SPTBN4Q9H254 2564 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 DNAH9Q9NYC9 4486 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 A0A096LPF7 62 aa1.52□□□□□ -2.17
UBXN4-208ENST00000490163 ACYP2P14621 99 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms