RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 HSBP1L1C9JCN9 74 aa10.41□□□□□ -0.74
CD55-209ENST00000488171 VAMP3Q15836 100 aa10.41□□□□□ -0.74
CD55-209ENST00000488171 KRTAP9-6A0A140TA67 174 aa10.39□□□□□ -0.75
CD55-209ENST00000488171 hADV29S1A0JD25 119 aa10.38□□□□□ -0.75
CD55-209ENST00000488171 Q6ZQY7 126 aa10.38□□□□□ -0.75
CD55-209ENST00000488171 F8WEM9 126 aa10.37□□□□□ -0.75
CD55-209ENST00000488171 TCL1BO95988 128 aa10.36□□□□□ -0.75
CD55-209ENST00000488171 RPL37P61927 97 aaKnown RBP10.34□□□□□ -0.75
CD55-209ENST00000488171 MT1HP80294 61 aa10.34□□□□□ -0.75
CD55-209ENST00000488171 S100A6P06703 90 aa10.33□□□□□ -0.76
CD55-209ENST00000488171 C12orf57Q99622 126 aa10.33□□□□□ -0.76
CD55-209ENST00000488171 Q6JHZ5 121 aa10.31□□□□□ -0.76
CD55-209ENST00000488171 IGFL1Q6UW32 110 aa10.31□□□□□ -0.76
CD55-209ENST00000488171 CLEC2BQ92478 149 aa10.3□□□□□ -0.76
CD55-209ENST00000488171 HIST1H4GQ99525 98 aa10.3□□□□□ -0.76
CD55-209ENST00000488171 TRBV7-7A0A0K0K1E9 115 aa10.29□□□□□ -0.76
CD55-209ENST00000488171 SCGB1D1O95968 90 aa10.29□□□□□ -0.76
CD55-209ENST00000488171 OCIAD2Q56VL3 154 aa10.29□□□□□ -0.76
CD55-209ENST00000488171 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.29□□□□□ -0.76
CD55-209ENST00000488171 COX8AP10176 69 aa10.28□□□□□ -0.76
CD55-209ENST00000488171 BVES-AS1Q5T3Y7 98 aa10.28□□□□□ -0.76
CD55-209ENST00000488171 PPDPFLQ8WWR9 84 aa10.26□□□□□ -0.77
CD55-209ENST00000488171 DLEU1O43261 78 aa10.25□□□□□ -0.77
CD55-209ENST00000488171 CFC1BP0CG36 223 aa10.22□□□□□ -0.77
CD55-209ENST00000488171 CFC1P0CG37 223 aa10.22□□□□□ -0.77
CD55-209ENST00000488171 SNHG12Q9BXW3 62 aa10.22□□□□□ -0.77
CD55-209ENST00000488171 H3BUT2 72 aa10.21□□□□□ -0.78
CD55-209ENST00000488171 C14orf144Q96I85 54 aa10.2□□□□□ -0.78
CD55-209ENST00000488171 LOC100996750A0A140TA64 210 aa10.19□□□□□ -0.78
CD55-209ENST00000488171 KRTAP4-6Q9BYQ5 205 aa10.19□□□□□ -0.78
CD55-209ENST00000488171 RAB37Q96AX2 223 aa10.17□□□□□ -0.78
CD55-209ENST00000488171 HIGD1BQ9P298 99 aa10.17□□□□□ -0.78
CD55-209ENST00000488171 OBSCN-AS1Q96MR7 158 aa10.16□□□□□ -0.78
CD55-209ENST00000488171 FAM218AQ96MZ4 157 aa10.16□□□□□ -0.78
CD55-209ENST00000488171 A0A0B4J2C4 111 aa10.15□□□□□ -0.78
CD55-209ENST00000488171 PAM16Q9Y3D7 125 aa10.15□□□□□ -0.78
CD55-209ENST00000488171 KRTAP10-6P60371 365 aaPredicted RBP10.14□□□□□ -0.79
CD55-209ENST00000488171 SPATA45Q537H7 98 aa10.14□□□□□ -0.79
CD55-209ENST00000488171 C2orf91Q6ZV80 131 aa10.14□□□□□ -0.79
CD55-209ENST00000488171 H0YGX0 51 aa10.14□□□□□ -0.79
CD55-209ENST00000488171 LST1O00453 97 aa10.14□□□□□ -0.79
CD55-209ENST00000488171 Q6Q795 121 aa10.13□□□□□ -0.79
CD55-209ENST00000488171 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
CD55-209ENST00000488171 Q75L30 129 aa10.13□□□□□ -0.79
CD55-209ENST00000488171 NDUFV3P56181 108 aaKnown RBP10.11□□□□□ -0.79
CD55-209ENST00000488171 CRCT1Q9UGL9 99 aa10.11□□□□□ -0.79
CD55-209ENST00000488171 SNCGO76070 127 aa10.1□□□□□ -0.79
CD55-209ENST00000488171 ATP11AUNQ6ZP68 121 aa10.09□□□□□ -0.79
CD55-209ENST00000488171 TEN1Q86WV5 123 aa10.09□□□□□ -0.79
CD55-209ENST00000488171 VAMP8Q9BV40 100 aa10.09□□□□□ -0.79
CD55-209ENST00000488171 FLGP20930 4061 aaPredicted RBP10.08□□□□□ -0.8
CD55-209ENST00000488171 M0R2T5 61 aa10.08□□□□□ -0.8
CD55-209ENST00000488171 CEND1Q8N111 149 aa10.08□□□□□ -0.8
CD55-209ENST00000488171 SS18L2Q9UHA2 77 aa10.08□□□□□ -0.8
CD55-209ENST00000488171 Q96NJ1 140 aa10.06□□□□□ -0.8
CD55-209ENST00000488171 PRO1854Q9UHT4 67 aa10.05□□□□□ -0.8
CD55-209ENST00000488171 A0A087WSZ3 146 aa10.04□□□□□ -0.8
CD55-209ENST00000488171 A0A1B0GX51 115 aa10.04□□□□□ -0.8
CD55-209ENST00000488171 H3BMG7 143 aa10.03□□□□□ -0.8
CD55-209ENST00000488171 FXYD2P54710 66 aa10.03□□□□□ -0.8
CD55-209ENST00000488171 FSIP2Q5CZC0 6907 aa10.03□□□□□ -0.8
CD55-209ENST00000488171 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
CD55-209ENST00000488171 C20orf166-AS1Q96NR2 134 aa10.01□□□□□ -0.81
CD55-209ENST00000488171 TRIAP1O43715 76 aa10.01□□□□□ -0.81
CD55-209ENST00000488171 FABP2P12104 132 aa10.01□□□□□ -0.81
CD55-209ENST00000488171 GHRHP01286 108 aa10□□□□□ -0.81
CD55-209ENST00000488171 A8MUU9 505 aa9.99□□□□□ -0.81
CD55-209ENST00000488171 A0A1W2PNM2 257 aa9.98□□□□□ -0.81
CD55-209ENST00000488171 TMA7Q9Y2S6 64 aaKnown RBP9.94□□□□□ -0.82
CD55-209ENST00000488171 DSCR10P59022 87 aa9.93□□□□□ -0.82
CD55-209ENST00000488171 PYY3Q5JQD4 70 aa9.91□□□□□ -0.82
CD55-209ENST00000488171 K7ERJ3 54 aa9.9□□□□□ -0.82
CD55-209ENST00000488171 HSD52Q0P140 79 aa9.9□□□□□ -0.82
CD55-209ENST00000488171 ORMDL1Q9P0S3 153 aa9.9□□□□□ -0.82
CD55-209ENST00000488171 DNAL4O96015 105 aa9.89□□□□□ -0.83
CD55-209ENST00000488171 ANKRD29Q8N6D5 301 aa9.89□□□□□ -0.83
CD55-209ENST00000488171 SIGMAR1Q99720 223 aa9.89□□□□□ -0.83
CD55-209ENST00000488171 TRBV7-4A0A0J9YYF1 115 aa9.88□□□□□ -0.83
CD55-209ENST00000488171 A0A1B0GV72 72 aa9.88□□□□□ -0.83
CD55-209ENST00000488171 PSMB2P49721 201 aa9.88□□□□□ -0.83
CD55-209ENST00000488171 H3BQ85 93 aa9.87□□□□□ -0.83
CD55-209ENST00000488171 LOC105371267A0A1B0GV96 52 aa9.86□□□□□ -0.83
CD55-209ENST00000488171 IGKV4-1P06312 121 aa9.86□□□□□ -0.83
CD55-209ENST00000488171 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
CD55-209ENST00000488171 TMEM256-PLSCR3K7ERE1 68 aa9.85□□□□□ -0.83
CD55-209ENST00000488171 LINC00313P59037 77 aa9.84□□□□□ -0.83
CD55-209ENST00000488171 COX6CP09669 75 aa9.83□□□□□ -0.84
CD55-209ENST00000488171 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
CD55-209ENST00000488171 NOTCH2NLQ7Z3S9 236 aa9.82□□□□□ -0.84
CD55-209ENST00000488171 LINC00472Q9H8W2 130 aa9.82□□□□□ -0.84
CD55-209ENST00000488171 CCKP06307 115 aa9.81□□□□□ -0.84
CD55-209ENST00000488171 DEFB116Q30KQ4 102 aa9.8□□□□□ -0.84
CD55-209ENST00000488171 UBE2V1Q13404 147 aa9.79□□□□□ -0.84
CD55-209ENST00000488171 TRACP01848 142 aa9.78□□□□□ -0.84
CD55-209ENST00000488171 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.84
CD55-209ENST00000488171 UQCR10Q9UDW1 63 aa9.77□□□□□ -0.84
CD55-209ENST00000488171 IGHV6-1A0A0B4J1U7 121 aa9.74□□□□□ -0.85
CD55-209ENST00000488171 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
CD55-209ENST00000488171 SCGB1C2P0DMR2 95 aa9.7□□□□□ -0.86
CD55-209ENST00000488171 HRES1P13985 223 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms