RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 XGP55808 180 aa5.77□□□□□ -1.49
SF3B1-211ENST00000487698 C1orf137Q5JT78 98 aa5.77□□□□□ -1.49
SF3B1-211ENST00000487698 LRP1BQ9NZR2 4599 aa5.76□□□□□ -1.49
SF3B1-211ENST00000487698 ZNF861PO60384 105 aa5.75□□□□□ -1.49
SF3B1-211ENST00000487698 HAMPP81172 84 aa5.75□□□□□ -1.49
SF3B1-211ENST00000487698 LINC00846Q9NV44 126 aa5.75□□□□□ -1.49
SF3B1-211ENST00000487698 IGLV7-43P04211 117 aa5.74□□□□□ -1.49
SF3B1-211ENST00000487698 C21orf62-AS1Q17RA5 79 aa5.74□□□□□ -1.49
SF3B1-211ENST00000487698 IGLV8-61A0A075B6I0 122 aa5.74□□□□□ -1.49
SF3B1-211ENST00000487698 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
SF3B1-211ENST00000487698 SIGMAR1Q99720 223 aa5.74□□□□□ -1.49
SF3B1-211ENST00000487698 DYNC1H1Q14204 4646 aaKnown RBP5.73□□□□□ -1.49
SF3B1-211ENST00000487698 SPRR4Q96PI1 79 aa5.73□□□□□ -1.49
SF3B1-211ENST00000487698 LINC00483Q53H64 154 aa5.72□□□□□ -1.49
SF3B1-211ENST00000487698 F8WEM9 126 aa5.72□□□□□ -1.49
SF3B1-211ENST00000487698 LINC00643Q86TS7 51 aa5.71□□□□□ -1.5
SF3B1-211ENST00000487698 RYR3Q15413 4870 aa5.71□□□□□ -1.5
SF3B1-211ENST00000487698 ZNF706Q9Y5V0 76 aaPredicted RBP5.71□□□□□ -1.5
SF3B1-211ENST00000487698 A0A1W2PNM2 257 aa5.7□□□□□ -1.5
SF3B1-211ENST00000487698 VPS13BQ7Z7G8 4022 aa5.7□□□□□ -1.5
SF3B1-211ENST00000487698 IGFL1Q6UW32 110 aa5.69□□□□□ -1.5
SF3B1-211ENST00000487698 Q8NBF4 154 aa5.69□□□□□ -1.5
SF3B1-211ENST00000487698 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
SF3B1-211ENST00000487698 A0A1B0GW54 56 aa5.68□□□□□ -1.5
SF3B1-211ENST00000487698 Q6JHZ5 121 aa5.68□□□□□ -1.5
SF3B1-211ENST00000487698 UBL5Q9BZL1 73 aa5.68□□□□□ -1.5
SF3B1-211ENST00000487698 TRBV7-7A0A0K0K1E9 115 aa5.67□□□□□ -1.5
SF3B1-211ENST00000487698 A0A0G2JQZ4 141 aa5.66□□□□□ -1.5
SF3B1-211ENST00000487698 Q6ZVQ6 151 aa5.66□□□□□ -1.5
SF3B1-211ENST00000487698 CRYGAP11844 174 aa5.66□□□□□ -1.5
SF3B1-211ENST00000487698 Q6Q795 121 aa5.65□□□□□ -1.5
SF3B1-211ENST00000487698 ATP5EP2Q5VTU8 51 aa5.65□□□□□ -1.51
SF3B1-211ENST00000487698 RPL37AP61513 92 aaKnown RBP5.64□□□□□ -1.51
SF3B1-211ENST00000487698 ANAPC11Q9NYG5 84 aa5.64□□□□□ -1.51
SF3B1-211ENST00000487698 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
SF3B1-211ENST00000487698 SCGB1A1P11684 91 aa5.63□□□□□ -1.51
SF3B1-211ENST00000487698 IMUPQ9GZP8 106 aa5.63□□□□□ -1.51
SF3B1-211ENST00000487698 IGKV3D-7A0A0C4DH55 119 aa5.62□□□□□ -1.51
SF3B1-211ENST00000487698 C9orf153Q5TBE3 101 aa5.62□□□□□ -1.51
SF3B1-211ENST00000487698 MOBPQ13875 183 aa5.61□□□□□ -1.51
SF3B1-211ENST00000487698 KRTAP1-4P0C5Y4 121 aa5.6□□□□□ -1.51
SF3B1-211ENST00000487698 KRTAP10-4P60372 401 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-211ENST00000487698 CXCL6P80162 114 aa5.6□□□□□ -1.51
SF3B1-211ENST00000487698 NREPQ16612 68 aa5.6□□□□□ -1.51
SF3B1-211ENST00000487698 SMR3BP02814 79 aaPredicted RBP5.6□□□□□ -1.51
SF3B1-211ENST00000487698 A0A087WSZ3 146 aa5.59□□□□□ -1.51
SF3B1-211ENST00000487698 FAM229BQ4G0N7 80 aa5.59□□□□□ -1.51
SF3B1-211ENST00000487698 A0A087X002 238 aa5.58□□□□□ -1.52
SF3B1-211ENST00000487698 FAT1Q14517 4588 aa5.58□□□□□ -1.52
SF3B1-211ENST00000487698 SPINK6Q6UWN8 80 aa5.57□□□□□ -1.52
SF3B1-211ENST00000487698 KRTAP13-2Q52LG2 175 aa5.57□□□□□ -1.52
SF3B1-211ENST00000487698 A0A087WVE0 104 aa5.56□□□□□ -1.52
SF3B1-211ENST00000487698 BPY2O14599 106 aa5.56□□□□□ -1.52
SF3B1-211ENST00000487698 SSBP3-AS1Q7Z2R9 100 aa5.56□□□□□ -1.52
SF3B1-211ENST00000487698 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
SF3B1-211ENST00000487698 HIST1H4AP62805 103 aaKnown RBP5.55□□□□□ -1.52
SF3B1-211ENST00000487698 HSPG2P98160 4391 aa5.55□□□□□ -1.52
SF3B1-211ENST00000487698 FAM236AA0A1B0GUQ0 79 aa5.54□□□□□ -1.52
SF3B1-211ENST00000487698 FAM236BA0A1B0GV22 79 aa5.54□□□□□ -1.52
SF3B1-211ENST00000487698 PCP4P48539 62 aa5.54□□□□□ -1.52
SF3B1-211ENST00000487698 PKHD1L1Q86WI1 4243 aa5.54□□□□□ -1.52
SF3B1-211ENST00000487698 DSCR10P59022 87 aa5.53□□□□□ -1.52
SF3B1-211ENST00000487698 CD164Q04900 197 aa5.53□□□□□ -1.52
SF3B1-211ENST00000487698 LINC00472Q9H8W2 130 aa5.53□□□□□ -1.52
SF3B1-211ENST00000487698 RYR1P21817 5038 aa5.53□□□□□ -1.52
SF3B1-211ENST00000487698 IGKV4-1P06312 121 aa5.53□□□□□ -1.52
SF3B1-211ENST00000487698 HRCT1Q6UXD1 115 aa5.53□□□□□ -1.52
SF3B1-211ENST00000487698 PLA2G1BP04054 148 aaKnown RBP5.52□□□□□ -1.53
SF3B1-211ENST00000487698 Q8N9L7 120 aa5.52□□□□□ -1.53
SF3B1-211ENST00000487698 Q96NJ1 140 aa5.51□□□□□ -1.53
SF3B1-211ENST00000487698 SS18L2Q9UHA2 77 aa5.51□□□□□ -1.53
SF3B1-211ENST00000487698 EPPK1P58107 5090 aaKnown RBP5.51□□□□□ -1.53
SF3B1-211ENST00000487698 DEFB116Q30KQ4 102 aa5.5□□□□□ -1.53
SF3B1-211ENST00000487698 K7EQZ3 153 aa5.49□□□□□ -1.53
SF3B1-211ENST00000487698 KIAA1109Q2LD37 5005 aa5.48□□□□□ -1.53
SF3B1-211ENST00000487698 FAM229AH3BQW9 127 aa5.48□□□□□ -1.53
SF3B1-211ENST00000487698 J3KT08 172 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 Q5VSD8 79 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 PRR26Q8N8Z3 221 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 ANAPC13Q9BS18 74 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 ATOX1O00244 68 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 ASB16-AS1Q495Z4 193 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 Q5XG85 94 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
SF3B1-211ENST00000487698 A8MWP4 228 aa5.46□□□□□ -1.54
SF3B1-211ENST00000487698 KRTAP17-1Q9BYP8 105 aa5.46□□□□□ -1.54
SF3B1-211ENST00000487698 PRR15Q8IV56 129 aa5.44□□□□□ -1.54
SF3B1-211ENST00000487698 HCG22E2RYF7 251 aa5.42□□□□□ -1.54
SF3B1-211ENST00000487698 SPINK1P00995 79 aa5.42□□□□□ -1.54
SF3B1-211ENST00000487698 LINC00304Q8N9R0 145 aa5.42□□□□□ -1.54
SF3B1-211ENST00000487698 RPS29P62273 56 aaKnown RBP5.41□□□□□ -1.54
SF3B1-211ENST00000487698 LIMD2Q9BT23 127 aa5.41□□□□□ -1.54
SF3B1-211ENST00000487698 C4orf48Q5BLP8 95 aa5.41□□□□□ -1.54
SF3B1-211ENST00000487698 Q8N1X5 172 aa5.41□□□□□ -1.54
SF3B1-211ENST00000487698 KRTAP29-1A8MX34 341 aaPredicted RBP5.4□□□□□ -1.54
SF3B1-211ENST00000487698 LCE2BO14633 110 aa5.4□□□□□ -1.54
SF3B1-211ENST00000487698 NDUFB1O75438 58 aa5.4□□□□□ -1.54
SF3B1-211ENST00000487698 C1orf195Q5TG92 126 aa5.4□□□□□ -1.54
SF3B1-211ENST00000487698 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
SF3B1-211ENST00000487698 SERP2Q8N6R1 65 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 259.7 ms