RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 DNAH8Q96JB1 4490 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 TRBV20-1A0A075B6N2 111 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 H3BT86 120 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 CRPP02741 224 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 ANGP03950 147 aaKnown RBP3.01□□□□□ -1.93
RTN4-214ENST00000486085 PLNP26678 52 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 SS18Q15532 418 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 SFTA2Q6UW10 78 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 LINC00269Q8N2A0 174 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 FAM19A2Q8N3H0 131 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 TP73-AS1Q9UF72 201 aa3.01□□□□□ -1.93
RTN4-214ENST00000486085 DYNC1H1Q14204 4646 aaKnown RBP3.01□□□□□ -1.93
RTN4-214ENST00000486085 LRP1BQ9NZR2 4599 aa3□□□□□ -1.93
RTN4-214ENST00000486085 GVQW2A0A096LPI5 108 aaPredicted RBP3□□□□□ -1.93
RTN4-214ENST00000486085 C11orf86A6NJI1 115 aa3□□□□□ -1.93
RTN4-214ENST00000486085 H3BRM9 83 aa3□□□□□ -1.93
RTN4-214ENST00000486085 TMEM256-PLSCR3K7ERE1 68 aa3□□□□□ -1.93
RTN4-214ENST00000486085 IGKV4-1P06312 121 aa3□□□□□ -1.93
RTN4-214ENST00000486085 C3orf79P0CE67 100 aa3□□□□□ -1.93
RTN4-214ENST00000486085 HINT1P49773 126 aaPredicted RBP3□□□□□ -1.93
RTN4-214ENST00000486085 PMCHL1Q16048 86 aa3□□□□□ -1.93
RTN4-214ENST00000486085 PKHD1P08F94 4074 aa3□□□□□ -1.93
RTN4-214ENST00000486085 SNCGO76070 127 aa2.99□□□□□ -1.93
RTN4-214ENST00000486085 ZNF22P17026 224 aaPredicted RBP2.99□□□□□ -1.93
RTN4-214ENST00000486085 CNBPP62633 177 aaKnown RBP2.99□□□□□ -1.93
RTN4-214ENST00000486085 C1orf134Q5TEV5 83 aa2.99□□□□□ -1.93
RTN4-214ENST00000486085 UBE2WQ96B02 151 aa2.99□□□□□ -1.93
RTN4-214ENST00000486085 MRPL35Q9NZE8 188 aaKnown RBP2.99□□□□□ -1.93
RTN4-214ENST00000486085 ZNF706Q9Y5V0 76 aaPredicted RBP2.99□□□□□ -1.93
RTN4-214ENST00000486085 IGHV3-64A0A075B6Q5 118 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 LY6G6CO95867 125 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 IGHV3-30P01768 117 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 IGHV3-33P01772 117 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 IGKCP01834 107 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 IGHV3-30-3P0DP02 117 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 IGHV3-30-5P0DP03 117 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 COX7CP15954 63 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 UBE2BP63146 152 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 BVES-AS1Q5T3Y7 98 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 Q8IZM0 81 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 C1orf64Q8NEQ6 169 aa2.98□□□□□ -1.93
RTN4-214ENST00000486085 INAFM2P0DMQ5 153 aa2.97□□□□□ -1.93
RTN4-214ENST00000486085 NPC2P61916 151 aa2.97□□□□□ -1.93
RTN4-214ENST00000486085 SCXQ7RTU7 201 aa2.97□□□□□ -1.93
RTN4-214ENST00000486085 CDKN2A-AS1Q9UH64 79 aa2.97□□□□□ -1.93
RTN4-214ENST00000486085 SPCS1Q9Y6A9 102 aa2.97□□□□□ -1.93
RTN4-214ENST00000486085 A0A087WTM6 91 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 LOC107984156A0A0G2JMH3 177 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 TRBV30A0A0K0K1B3 111 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 TRBV7-7A0A0K0K1E9 115 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 A0A1B0GW54 56 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 A0A1W2PPM0 123 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 XCL1P47992 114 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 COX6A2Q02221 97 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 COX17Q14061 63 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 LINC01554Q52M75 96 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 ARL17AQ8IVW1 177 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 DEFB104AQ8WTQ1 72 aa2.96□□□□□ -1.94
RTN4-214ENST00000486085 ZNF625Q96I27 306 aaPredicted RBP2.96□□□□□ -1.94
RTN4-214ENST00000486085 APOBP04114 4563 aaKnown RBP2.95□□□□□ -1.94
RTN4-214ENST00000486085 IGLV10-54A0A075B6I4 117 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 LEPROTO15243 131 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 TIMM17BO60830 172 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 IGLV7-43P04211 117 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 KRTDAPP60985 99 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 CIRBPQ14011 172 aaKnown RBP2.95□□□□□ -1.94
RTN4-214ENST00000486085 SPATA45Q537H7 98 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 C7orf65Q6ZTY9 151 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 FP248Q71RG6 208 aaPredicted RBP2.95□□□□□ -1.94
RTN4-214ENST00000486085 Q8N814 137 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 C9orf163Q8N9P6 203 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 PPDPFLQ8WWR9 84 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 DIRC1Q969H9 104 aa2.95□□□□□ -1.94
RTN4-214ENST00000486085 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.94□□□□□ -1.94
RTN4-214ENST00000486085 NDUFA1O15239 70 aa2.94□□□□□ -1.94
RTN4-214ENST00000486085 PSCAO43653 123 aa2.94□□□□□ -1.94
RTN4-214ENST00000486085 TCL1BO95988 128 aa2.94□□□□□ -1.94
RTN4-214ENST00000486085 CLPSL2Q6UWE3 100 aa2.94□□□□□ -1.94
RTN4-214ENST00000486085 COX7B2Q8TF08 81 aa2.94□□□□□ -1.94
RTN4-214ENST00000486085 DSCR8Q96T75 97 aa2.94□□□□□ -1.94
RTN4-214ENST00000486085 SND1-IT1Q9HBX3 110 aa2.94□□□□□ -1.94
RTN4-214ENST00000486085 K7ERJ3 54 aa2.93□□□□□ -1.94
RTN4-214ENST00000486085 SPAG11BQ08648 103 aa2.93□□□□□ -1.94
RTN4-214ENST00000486085 WFDC2Q14508 124 aa2.93□□□□□ -1.94
RTN4-214ENST00000486085 TMEM170BQ5T4T1 132 aa2.93□□□□□ -1.94
RTN4-214ENST00000486085 Q6ZSA8 131 aa2.93□□□□□ -1.94
RTN4-214ENST00000486085 C5orf38Q86SI9 138 aa2.93□□□□□ -1.94
RTN4-214ENST00000486085 PMCHL2Q9BQD1 86 aa2.93□□□□□ -1.94
RTN4-214ENST00000486085 IGKV2D-26A0A0A0MRZ7 120 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 IGKV3OR2-268A0A0C4DH90 116 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 MYMXA0A1B0GTQ4 84 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 M0R2N4 97 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 COX8AP10176 69 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 ATP5EP56381 51 aaPredicted RBP2.92□□□□□ -1.94
RTN4-214ENST00000486085 HIGD1BQ9P298 99 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 LINC00474Q9P2X8 69 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 NDUFA12Q9UI09 145 aa2.92□□□□□ -1.94
RTN4-214ENST00000486085 TSPEAR-AS2P59090 65 aa2.91□□□□□ -1.94
RTN4-214ENST00000486085 ETDBQ3ZM63 59 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms