RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 HIST3H2BBQ8N257 126 aa13.7□□□□□ -0.22
HLA-F-227ENST00000485513 HIST1H2BLQ99880 126 aa13.7□□□□□ -0.22
HLA-F-227ENST00000485513 S100A2P29034 98 aa13.69□□□□□ -0.22
HLA-F-227ENST00000485513 Q6JHZ5 121 aa13.68□□□□□ -0.22
HLA-F-227ENST00000485513 CLEC2BQ92478 149 aa13.65□□□□□ -0.22
HLA-F-227ENST00000485513 TRBV7-7A0A0K0K1E9 115 aa13.63□□□□□ -0.23
HLA-F-227ENST00000485513 IGFL1Q6UW32 110 aa13.63□□□□□ -0.23
HLA-F-227ENST00000485513 CRCT1Q9UGL9 99 aa13.63□□□□□ -0.23
HLA-F-227ENST00000485513 OCIAD2Q56VL3 154 aa13.62□□□□□ -0.23
HLA-F-227ENST00000485513 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.6□□□□□ -0.23
HLA-F-227ENST00000485513 FSIP2Q5CZC0 6907 aa13.59□□□□□ -0.23
HLA-F-227ENST00000485513 COX6B2Q6YFQ2 88 aa13.59□□□□□ -0.23
HLA-F-227ENST00000485513 C12orf57Q99622 126 aa13.59□□□□□ -0.23
HLA-F-227ENST00000485513 BVES-AS1Q5T3Y7 98 aa13.58□□□□□ -0.24
HLA-F-227ENST00000485513 LORP23490 312 aaPredicted RBP13.57□□□□□ -0.24
HLA-F-227ENST00000485513 KRTAP10-6P60371 365 aaPredicted RBP13.57□□□□□ -0.24
HLA-F-227ENST00000485513 HIST1H4GQ99525 98 aa13.57□□□□□ -0.24
HLA-F-227ENST00000485513 PPDPFLQ8WWR9 84 aa13.56□□□□□ -0.24
HLA-F-227ENST00000485513 M0R2T5 61 aa13.55□□□□□ -0.24
HLA-F-227ENST00000485513 S100A6P06703 90 aa13.54□□□□□ -0.24
HLA-F-227ENST00000485513 SNHG12Q9BXW3 62 aa13.54□□□□□ -0.24
HLA-F-227ENST00000485513 OBSCN-AS1Q96MR7 158 aa13.51□□□□□ -0.25
HLA-F-227ENST00000485513 SCGB1D1O95968 90 aa13.5□□□□□ -0.25
HLA-F-227ENST00000485513 H3BUT2 72 aa13.49□□□□□ -0.25
HLA-F-227ENST00000485513 COX8AP10176 69 aa13.49□□□□□ -0.25
HLA-F-227ENST00000485513 LST1O00453 97 aa13.46□□□□□ -0.25
HLA-F-227ENST00000485513 ATP11AUNQ6ZP68 121 aa13.46□□□□□ -0.25
HLA-F-227ENST00000485513 Q75L30 129 aa13.46□□□□□ -0.25
HLA-F-227ENST00000485513 FLGP20930 4061 aaPredicted RBP13.45□□□□□ -0.26
HLA-F-227ENST00000485513 DLEU1O43261 78 aa13.43□□□□□ -0.26
HLA-F-227ENST00000485513 CFC1P0CG37 223 aa13.42□□□□□ -0.26
HLA-F-227ENST00000485513 RAB37Q96AX2 223 aa13.41□□□□□ -0.26
HLA-F-227ENST00000485513 SNCGO76070 127 aa13.4□□□□□ -0.26
HLA-F-227ENST00000485513 SS18L2Q9UHA2 77 aa13.4□□□□□ -0.26
HLA-F-227ENST00000485513 S100A1P23297 94 aa13.39□□□□□ -0.27
HLA-F-227ENST00000485513 Q6Q795 121 aa13.38□□□□□ -0.27
HLA-F-227ENST00000485513 H0YGX0 51 aa13.37□□□□□ -0.27
HLA-F-227ENST00000485513 Q96NJ1 140 aa13.37□□□□□ -0.27
HLA-F-227ENST00000485513 C14orf144Q96I85 54 aa13.36□□□□□ -0.27
HLA-F-227ENST00000485513 NDUFV3P56181 108 aaKnown RBP13.35□□□□□ -0.27
HLA-F-227ENST00000485513 TEN1Q86WV5 123 aa13.35□□□□□ -0.27
HLA-F-227ENST00000485513 A0A0B4J2C4 111 aa13.34□□□□□ -0.27
HLA-F-227ENST00000485513 FAM218AQ96MZ4 157 aa13.34□□□□□ -0.27
HLA-F-227ENST00000485513 HIGD1BQ9P298 99 aa13.34□□□□□ -0.27
HLA-F-227ENST00000485513 PAM16Q9Y3D7 125 aa13.3□□□□□ -0.28
HLA-F-227ENST00000485513 A0A087WSZ3 146 aa13.28□□□□□ -0.28
HLA-F-227ENST00000485513 SPATA45Q537H7 98 aa13.28□□□□□ -0.28
HLA-F-227ENST00000485513 C20orf166-AS1Q96NR2 134 aa13.28□□□□□ -0.28
HLA-F-227ENST00000485513 H3BMG7 143 aa13.26□□□□□ -0.29
HLA-F-227ENST00000485513 C2orf91Q6ZV80 131 aa13.26□□□□□ -0.29
HLA-F-227ENST00000485513 GHRHP01286 108 aa13.25□□□□□ -0.29
HLA-F-227ENST00000485513 A0A1B0GX51 115 aa13.24□□□□□ -0.29
HLA-F-227ENST00000485513 A8MUU9 505 aa13.24□□□□□ -0.29
HLA-F-227ENST00000485513 FABP2P12104 132 aa13.24□□□□□ -0.29
HLA-F-227ENST00000485513 CEND1Q8N111 149 aa13.22□□□□□ -0.29
HLA-F-227ENST00000485513 VAMP8Q9BV40 100 aa13.22□□□□□ -0.29
HLA-F-227ENST00000485513 PRO1854Q9UHT4 67 aa13.22□□□□□ -0.29
HLA-F-227ENST00000485513 TMEM238LA0A1B0GVL6 79 aa13.2□□□□□ -0.3
HLA-F-227ENST00000485513 A6NJY4 79 aa13.2□□□□□ -0.3
HLA-F-227ENST00000485513 A0A1W2PNM2 257 aa13.16□□□□□ -0.3
HLA-F-227ENST00000485513 DSCR10P59022 87 aa13.16□□□□□ -0.3
HLA-F-227ENST00000485513 SIGMAR1Q99720 223 aa13.15□□□□□ -0.3
HLA-F-227ENST00000485513 TRBV20-1A0A075B6N2 111 aa13.14□□□□□ -0.31
HLA-F-227ENST00000485513 TRIAP1O43715 76 aa13.14□□□□□ -0.31
HLA-F-227ENST00000485513 FXYD2P54710 66 aa13.14□□□□□ -0.31
HLA-F-227ENST00000485513 DNAL4O96015 105 aa13.08□□□□□ -0.32
HLA-F-227ENST00000485513 ANKRD29Q8N6D5 301 aa13.08□□□□□ -0.32
HLA-F-227ENST00000485513 LINC00313P59037 77 aa13.07□□□□□ -0.32
HLA-F-227ENST00000485513 TRBV7-4A0A0J9YYF1 115 aa13.06□□□□□ -0.32
HLA-F-227ENST00000485513 IGKV4-1P06312 121 aa13.06□□□□□ -0.32
HLA-F-227ENST00000485513 ORMDL1Q9P0S3 153 aa13.06□□□□□ -0.32
HLA-F-227ENST00000485513 A0A1B0GV72 72 aa13.05□□□□□ -0.32
HLA-F-227ENST00000485513 H3BQ85 93 aa13.04□□□□□ -0.32
HLA-F-227ENST00000485513 PSMB2P49721 201 aa13.02□□□□□ -0.33
HLA-F-227ENST00000485513 KRTAP16-1A8MUX0 517 aa13.01□□□□□ -0.33
HLA-F-227ENST00000485513 KRTAP9-8Q9BYQ0 159 aa13.01□□□□□ -0.33
HLA-F-227ENST00000485513 TMEM256-PLSCR3K7ERE1 68 aa12.99□□□□□ -0.33
HLA-F-227ENST00000485513 HSD52Q0P140 79 aa12.99□□□□□ -0.33
HLA-F-227ENST00000485513 K7ERJ3 54 aa12.98□□□□□ -0.33
HLA-F-227ENST00000485513 COX6CP09669 75 aa12.97□□□□□ -0.33
HLA-F-227ENST00000485513 CCKP06307 115 aa12.96□□□□□ -0.33
HLA-F-227ENST00000485513 DEFB116Q30KQ4 102 aa12.96□□□□□ -0.33
HLA-F-227ENST00000485513 NOTCH2NLQ7Z3S9 236 aa12.96□□□□□ -0.33
HLA-F-227ENST00000485513 TRACP01848 142 aa12.95□□□□□ -0.34
HLA-F-227ENST00000485513 LINC00472Q9H8W2 130 aa12.95□□□□□ -0.34
HLA-F-227ENST00000485513 FAM236DA0A1B0GTK5 79 aa12.94□□□□□ -0.34
HLA-F-227ENST00000485513 FAM236CP0DP71 79 aa12.94□□□□□ -0.34
HLA-F-227ENST00000485513 IGHV6-1A0A0B4J1U7 121 aa12.9□□□□□ -0.34
HLA-F-227ENST00000485513 UBE2V1Q13404 147 aa12.9□□□□□ -0.34
HLA-F-227ENST00000485513 PYY3Q5JQD4 70 aa12.89□□□□□ -0.35
HLA-F-227ENST00000485513 RBM12B-AS1Q9P1G2 102 aa12.88□□□□□ -0.35
HLA-F-227ENST00000485513 HRES1P13985 223 aa12.86□□□□□ -0.35
HLA-F-227ENST00000485513 MPLKIPQ8TAP9 179 aa12.86□□□□□ -0.35
HLA-F-227ENST00000485513 VPS25Q9BRG1 176 aa12.84□□□□□ -0.35
HLA-F-227ENST00000485513 USH2AO75445 5202 aa12.82□□□□□ -0.36
HLA-F-227ENST00000485513 MT2AP02795 61 aa12.81□□□□□ -0.36
HLA-F-227ENST00000485513 A0A1B0GVX0 72 aa12.8□□□□□ -0.36
HLA-F-227ENST00000485513 C8orf87E5RJ46 101 aa12.8□□□□□ -0.36
HLA-F-227ENST00000485513 RBM3P98179 157 aaKnown RBP12.8□□□□□ -0.36
HLA-F-227ENST00000485513 UQCR10Q9UDW1 63 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms