RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PRO3102Q9H379 93 aa1.28□□□□□ -2.2
SRRM1-213ENST00000485441 NDUFA4L2Q9NRX3 87 aa1.28□□□□□ -2.2
SRRM1-213ENST00000485441 CENPFP49454 3210 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 ZANQ9Y493 2812 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 RIF1Q5UIP0 2472 aaKnown RBP1.27□□□□□ -2.21
SRRM1-213ENST00000485441 ABCA4P78363 2273 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 ASCC3Q8N3C0 2202 aaKnown RBP1.27□□□□□ -2.21
SRRM1-213ENST00000485441 MED12Q93074 2177 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 H0YGX0 51 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 SAA2P0DJI9 122 aaPredicted RBP1.27□□□□□ -2.21
SRRM1-213ENST00000485441 ELOF1P60002 83 aaKnown RBP1.27□□□□□ -2.21
SRRM1-213ENST00000485441 CEP295Q9C0D2 2601 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 IGF2RP11717 2491 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 SPTBN2O15020 2390 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 RYR1P21817 5038 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 MYO7BQ6PIF6 2116 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 ASPMQ8IZT6 3477 aa1.27□□□□□ -2.21
SRRM1-213ENST00000485441 LAMA3Q16787 3333 aa1.26□□□□□ -2.21
SRRM1-213ENST00000485441 CACNA1CQ13936 2221 aa1.26□□□□□ -2.21
SRRM1-213ENST00000485441 PRCDQ00LT1 54 aa1.26□□□□□ -2.21
SRRM1-213ENST00000485441 FAM74A4Q5TZK3 123 aa1.26□□□□□ -2.21
SRRM1-213ENST00000485441 LINC00308Q8TCZ7 52 aa1.26□□□□□ -2.21
SRRM1-213ENST00000485441 HYDINQ4G0P3 5121 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 HIVEP3Q5T1R4 2406 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 LCE6AA0A183 80 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 NDUFA1O15239 70 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 MGPP08493 103 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 RPL39P62891 51 aaKnown RBP1.25□□□□□ -2.21
SRRM1-213ENST00000485441 PRB3Q04118 309 aaPredicted RBP1.25□□□□□ -2.21
SRRM1-213ENST00000485441 DEFB123Q8N688 67 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 C5orf56Q8N8D9 126 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 LEAP2Q969E1 77 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 RPL39LQ96EH5 51 aaKnown RBP1.25□□□□□ -2.21
SRRM1-213ENST00000485441 LINC00208Q96KT6 92 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 LINC01558Q9Y6Z2 57 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 NF1P21359 2839 aa1.25□□□□□ -2.21
SRRM1-213ENST00000485441 UTP20O75691 2785 aaKnown RBP1.25□□□□□ -2.21
SRRM1-213ENST00000485441 CSMD1Q96PZ7 3565 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 PRUNE2Q8WUY3 3088 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 PI4KAP42356 2102 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 CLPSL1A2RUU4 121 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 DEFB108AA8MXU0 73 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 NDUFA4O00483 81 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 NDUFB1O75438 58 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 SPINK7P58062 85 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 SPAG11BQ08648 103 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 SPAG11AQ6PDA7 123 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 Q6ZQY7 126 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 SMIM11BQ8TCY0 68 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 COX7B2Q8TF08 81 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 GAFA1Q96PS6 74 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 PLAC8Q9NZF1 115 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 PDZD2O15018 2839 aa1.24□□□□□ -2.21
SRRM1-213ENST00000485441 USP9YO00507 2555 aaPredicted RBP1.23□□□□□ -2.21
SRRM1-213ENST00000485441 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.23□□□□□ -2.21
SRRM1-213ENST00000485441 ETDCA0A1B0GVM5 59 aa1.23□□□□□ -2.21
SRRM1-213ENST00000485441 POLR2KP53803 58 aaKnown RBP1.23□□□□□ -2.21
SRRM1-213ENST00000485441 RPL39P5Q59GN2 51 aa1.23□□□□□ -2.21
SRRM1-213ENST00000485441 CCL19Q99731 98 aa1.23□□□□□ -2.21
SRRM1-213ENST00000485441 CNTRLQ7Z7A1 2325 aa1.23□□□□□ -2.21
SRRM1-213ENST00000485441 TLN2Q9Y4G6 2542 aa1.23□□□□□ -2.21
SRRM1-213ENST00000485441 DNAJC13O75165 2243 aa1.23□□□□□ -2.21
SRRM1-213ENST00000485441 DEFB112Q30KQ8 113 aa1.22□□□□□ -2.21
SRRM1-213ENST00000485441 LINC00575Q6W349 94 aa1.22□□□□□ -2.21
SRRM1-213ENST00000485441 DEFB104AQ8WTQ1 72 aa1.22□□□□□ -2.21
SRRM1-213ENST00000485441 LENEPQ9Y5L5 61 aa1.22□□□□□ -2.21
SRRM1-213ENST00000485441 CACNA1HO95180 2353 aa1.22□□□□□ -2.21
SRRM1-213ENST00000485441 F8P00451 2351 aa1.22□□□□□ -2.21
SRRM1-213ENST00000485441 EPPK1P58107 5090 aaKnown RBP1.22□□□□□ -2.21
SRRM1-213ENST00000485441 SMG1Q96Q15 3661 aaKnown RBP1.21□□□□□ -2.22
SRRM1-213ENST00000485441 BSNQ9UPA5 3926 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 LINC00959A0A1B0GUT2 108 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 H0Y9P7 68 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 H0YGG7 62 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 CCL3L1P16619 93 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 WT1-ASQ06250 92 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 DEFB114Q30KQ6 69 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 TMEM167AQ8TBQ9 72 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 KNTC1P50748 2209 aa1.21□□□□□ -2.22
SRRM1-213ENST00000485441 MED13LQ71F56 2210 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 SPATA8Q6RVD6 105 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 C10orf99Q6UWK7 81 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 COX14Q96I36 57 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 KCNQ1DNQ9H478 68 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 CDKN2A-AS1Q9UH64 79 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 XIRP2A4UGR9 3374 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 GPR98Q8WXG9 6306 aa1.2□□□□□ -2.22
SRRM1-213ENST00000485441 DNAH14Q0VDD8 3507 aa1.19□□□□□ -2.22
SRRM1-213ENST00000485441 FRYQ5TBA9 3013 aa1.19□□□□□ -2.22
SRRM1-213ENST00000485441 MEGF8Q7Z7M0 2845 aa1.19□□□□□ -2.22
SRRM1-213ENST00000485441 CCL18P55774 89 aa1.19□□□□□ -2.22
SRRM1-213ENST00000485441 LINC00158P58513 81 aa1.19□□□□□ -2.22
SRRM1-213ENST00000485441 MGAM2Q2M2H8 2515 aa1.19□□□□□ -2.22
SRRM1-213ENST00000485441 TNCP24821 2201 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 A0A096LNT2 108 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 I3L2K1 104 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 M0QY20 66 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 UQCR11O14957 56 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 COX7BP24311 80 aa1.18□□□□□ -2.22
SRRM1-213ENST00000485441 COX6A2Q02221 97 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms