RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 MAP3K1Q13233 1512 aa-0.55□□□□□ -2.5
ERCC8-206ENST00000484330 SCN11AQ9UI33 1791 aa-0.55□□□□□ -2.5
ERCC8-206ENST00000484330 SRCAPQ6ZRS2 3230 aa-0.55□□□□□ -2.5
ERCC8-206ENST00000484330 POLR1AO95602 1720 aaPredicted RBP-0.55□□□□□ -2.5
ERCC8-206ENST00000484330 MYO3AQ8NEV4 1616 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 USP32Q8NFA0 1604 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 UQCRHLA0A096LP55 91 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 LINC00587B1AMM8 73 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 F8WEM9 126 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 NDUFA3O95167 84 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 TLN2Q9Y4G6 2542 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 ATP7BP35670 1465 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 TEX14Q8IWB6 1497 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 SMG1Q96Q15 3661 aaKnown RBP-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 BPTFQ12830 3046 aa-0.56□□□□□ -2.5
ERCC8-206ENST00000484330 EYSQ5T1H1 3165 aa-0.57□□□□□ -2.5
ERCC8-206ENST00000484330 NWD1Q149M9 1564 aa-0.57□□□□□ -2.5
ERCC8-206ENST00000484330 LTN1O94822 1766 aa-0.57□□□□□ -2.5
ERCC8-206ENST00000484330 SPTBN5Q9NRC6 3674 aaKnown RBP-0.57□□□□□ -2.5
ERCC8-206ENST00000484330 MT-ATP8P03928 68 aa-0.57□□□□□ -2.5
ERCC8-206ENST00000484330 MT1EP04732 61 aa-0.57□□□□□ -2.5
ERCC8-206ENST00000484330 DEPDC5O75140 1603 aa-0.57□□□□□ -2.5
ERCC8-206ENST00000484330 MYO9AB2RTY4 2548 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 UBR1Q8IWV7 1749 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 WIZO95785 1651 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 ATP10BO94823 1461 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 A0A1B0GUT8 65 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 H0YAA0 97 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 LINC00032P0C843 101 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 MT1HL1P0DM35 61 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 SARNPP82979 210 aaKnown RBP-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 DEFA5Q01523 94 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 PLGLAQ15195 96 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 COL5A1-AS1Q5SY13 56 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 GAFA1Q96PS6 74 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 CFAP46Q8IYW2 2715 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 ANKRD26Q9UPS8 1709 aa-0.58□□□□□ -2.5
ERCC8-206ENST00000484330 MAGI3Q5TCQ9 1506 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 SPENQ96T58 3664 aaKnown RBP-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 IQCF6A8MYZ5 107 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 C3orf79P0CE67 100 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 FAUP35544 74 aaKnown RBP-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 S100A10P60903 97 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 PRLHP81277 87 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 MT1LQ93083 61 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 PRO3102Q9H379 93 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 CNTLNQ9NXG0 1405 aa-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.59□□□□□ -2.5
ERCC8-206ENST00000484330 DOT1LQ8TEK3 1739 aa-0.6□□□□□ -2.51
ERCC8-206ENST00000484330 CYB5AP00167 134 aa-0.6□□□□□ -2.51
ERCC8-206ENST00000484330 SMR3BP02814 79 aaPredicted RBP-0.6□□□□□ -2.51
ERCC8-206ENST00000484330 HMGN2P05204 90 aaKnown RBP-0.6□□□□□ -2.51
ERCC8-206ENST00000484330 TCEAL7Q9BRU2 100 aa-0.6□□□□□ -2.51
ERCC8-206ENST00000484330 DPY30Q9C005 99 aa-0.6□□□□□ -2.51
ERCC8-206ENST00000484330 S4R3F8 94 aa-0.6□□□□□ -2.51
ERCC8-206ENST00000484330 ADGRG4Q8IZF6 3080 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 DMXL2Q8TDJ6 3036 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 CEP162Q5TB80 1403 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 S100PP25815 95 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 SMIM11AP58511 58 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 LINC00158P58513 81 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 DEFB1P60022 68 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 PEA15Q15121 130 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 DEFB110Q30KQ9 67 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 KRTAP8-1Q8IUC2 63 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 C14orf144Q96I85 54 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 AKAP12Q02952 1782 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 TMEM131LA2VDJ0 1609 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 ITPR2Q14571 2701 aa-0.61□□□□□ -2.51
ERCC8-206ENST00000484330 THOC2Q8NI27 1593 aaKnown RBP-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 SPTAN1Q13813 2472 aaKnown RBP-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 NEXMIFQ5QGS0 1516 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 MGAQ8IWI9 3026 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 TRAV21A0A0B4J279 112 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 LCE6AA0A183 80 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 K7EP34 96 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 MT1MQ8N339 61 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 ACBD7Q8N6N7 88 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 WFDC9Q8NEX5 89 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 DDX60LQ5H9U9 1706 aaKnown RBP-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 PEG3Q9GZU2 1588 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 DIP2BQ9P265 1576 aa-0.62□□□□□ -2.51
ERCC8-206ENST00000484330 NDUFB1O75438 58 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 GYPAP02724 150 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 MT2AP02795 61 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 MT1BP07438 61 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 RBP2P50120 134 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 PLIN4Q96Q06 1357 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 CCDC88BA6NC98 1476 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 ZNF831Q5JPB2 1677 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 ARFGEF2Q9Y6D5 1785 aa-0.63□□□□□ -2.51
ERCC8-206ENST00000484330 ABCA13Q86UQ4 5058 aa-0.64□□□□□ -2.51
ERCC8-206ENST00000484330 ITSN1Q15811 1721 aa-0.64□□□□□ -2.51
ERCC8-206ENST00000484330 ATMQ13315 3056 aa-0.64□□□□□ -2.51
ERCC8-206ENST00000484330 ANKRD36CQ5JPF3 1778 aa-0.64□□□□□ -2.51
ERCC8-206ENST00000484330 LYNX1G3V0Z9 82 aa-0.64□□□□□ -2.51
ERCC8-206ENST00000484330 KRTAP20-1Q3LI63 56 aa-0.64□□□□□ -2.51
ERCC8-206ENST00000484330 URB2Q14146 1524 aaKnown RBP-0.64□□□□□ -2.51
ERCC8-206ENST00000484330 PLCH1Q4KWH8 1693 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms