RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 Q5VV11 94 aa6.02□□□□□ -1.45
CDK5RAP2-216ENST00000483412 USP24Q9UPU5 2620 aa6.01□□□□□ -1.45
CDK5RAP2-216ENST00000483412 A0A1B0GU33 70 aa6.01□□□□□ -1.45
CDK5RAP2-216ENST00000483412 SMR3BP02814 79 aaPredicted RBP6□□□□□ -1.45
CDK5RAP2-216ENST00000483412 WDFY4Q6ZS81 3184 aa6□□□□□ -1.45
CDK5RAP2-216ENST00000483412 SZT2Q5T011 3432 aa6□□□□□ -1.45
CDK5RAP2-216ENST00000483412 XIRP2A4UGR9 3374 aa5.99□□□□□ -1.45
CDK5RAP2-216ENST00000483412 TRIOO75962 3097 aa5.99□□□□□ -1.45
CDK5RAP2-216ENST00000483412 OXTP01178 125 aa5.98□□□□□ -1.45
CDK5RAP2-216ENST00000483412 CENPEQ02224 2701 aa5.98□□□□□ -1.45
CDK5RAP2-216ENST00000483412 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
CDK5RAP2-216ENST00000483412 A0A0C4DFX4 3053 aa5.98□□□□□ -1.45
CDK5RAP2-216ENST00000483412 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
CDK5RAP2-216ENST00000483412 J3QL48 77 aa5.97□□□□□ -1.45
CDK5RAP2-216ENST00000483412 SPINK7P58062 85 aa5.97□□□□□ -1.45
CDK5RAP2-216ENST00000483412 CFAP54Q96N23 3096 aa5.96□□□□□ -1.46
CDK5RAP2-216ENST00000483412 Q8NDZ9 215 aa5.96□□□□□ -1.46
CDK5RAP2-216ENST00000483412 MGAM2Q2M2H8 2515 aa5.95□□□□□ -1.46
CDK5RAP2-216ENST00000483412 CAMK2N1Q7Z7J9 78 aa5.94□□□□□ -1.46
CDK5RAP2-216ENST00000483412 DMAC1Q96GE9 116 aa5.94□□□□□ -1.46
CDK5RAP2-216ENST00000483412 ATRQ13535 2644 aa5.93□□□□□ -1.46
CDK5RAP2-216ENST00000483412 DSPP15924 2871 aaKnown RBP5.93□□□□□ -1.46
CDK5RAP2-216ENST00000483412 ASB16-AS1Q495Z4 193 aa5.93□□□□□ -1.46
CDK5RAP2-216ENST00000483412 IGSF10Q6WRI0 2623 aa5.9□□□□□ -1.46
CDK5RAP2-216ENST00000483412 MAST4O15021 2626 aa5.9□□□□□ -1.47
CDK5RAP2-216ENST00000483412 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.89□□□□□ -1.47
CDK5RAP2-216ENST00000483412 LINC00483Q53H64 154 aa5.89□□□□□ -1.47
CDK5RAP2-216ENST00000483412 Q5W150 140 aa5.88□□□□□ -1.47
CDK5RAP2-216ENST00000483412 TNRC18O15417 2968 aaPredicted RBP5.87□□□□□ -1.47
CDK5RAP2-216ENST00000483412 VPS13AQ96RL7 3174 aa5.87□□□□□ -1.47
CDK5RAP2-216ENST00000483412 ZCCHC13Q8WW36 166 aaKnown RBP5.86□□□□□ -1.47
CDK5RAP2-216ENST00000483412 SPRR1AP35321 89 aa5.86□□□□□ -1.47
CDK5RAP2-216ENST00000483412 LINC00472Q9H8W2 130 aa5.85□□□□□ -1.47
CDK5RAP2-216ENST00000483412 LAMA1P25391 3075 aa5.84□□□□□ -1.47
CDK5RAP2-216ENST00000483412 S4R3F8 94 aa5.83□□□□□ -1.48
CDK5RAP2-216ENST00000483412 Q6ZSA8 131 aa5.83□□□□□ -1.48
CDK5RAP2-216ENST00000483412 TNP2Q05952 138 aa5.82□□□□□ -1.48
CDK5RAP2-216ENST00000483412 DNAH14Q0VDD8 3507 aa5.81□□□□□ -1.48
CDK5RAP2-216ENST00000483412 VCANP13611 3396 aa5.8□□□□□ -1.48
CDK5RAP2-216ENST00000483412 COL6A3P12111 3177 aa5.8□□□□□ -1.48
CDK5RAP2-216ENST00000483412 KRTAP21-3Q3LHN1 58 aa5.8□□□□□ -1.48
CDK5RAP2-216ENST00000483412 UNC79Q9P2D8 2635 aa5.8□□□□□ -1.48
CDK5RAP2-216ENST00000483412 TEP1Q99973 2627 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP2-216ENST00000483412 SPTBN5Q9NRC6 3674 aaKnown RBP5.79□□□□□ -1.48
CDK5RAP2-216ENST00000483412 ROMO1P60602 79 aa5.79□□□□□ -1.48
CDK5RAP2-216ENST00000483412 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
CDK5RAP2-216ENST00000483412 SPRR1BP22528 89 aa5.78□□□□□ -1.48
CDK5RAP2-216ENST00000483412 CELSR3Q9NYQ7 3312 aa5.78□□□□□ -1.48
CDK5RAP2-216ENST00000483412 PLAC8Q9NZF1 115 aa5.76□□□□□ -1.49
CDK5RAP2-216ENST00000483412 H1FX-AS1Q4G0G2 97 aa5.74□□□□□ -1.49
CDK5RAP2-216ENST00000483412 RPL37P61927 97 aaKnown RBP5.74□□□□□ -1.49
CDK5RAP2-216ENST00000483412 TEX15Q9BXT5 2789 aa5.73□□□□□ -1.49
CDK5RAP2-216ENST00000483412 BAHCC1Q9P281 2608 aa5.73□□□□□ -1.49
CDK5RAP2-216ENST00000483412 FRYQ5TBA9 3013 aa5.72□□□□□ -1.49
CDK5RAP2-216ENST00000483412 Q6ZR54 194 aa5.71□□□□□ -1.5
CDK5RAP2-216ENST00000483412 MAP1AP78559 2803 aaPredicted RBP5.7□□□□□ -1.5
CDK5RAP2-216ENST00000483412 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
CDK5RAP2-216ENST00000483412 R4GN34 69 aa5.69□□□□□ -1.5
CDK5RAP2-216ENST00000483412 CHD6Q8TD26 2715 aa5.69□□□□□ -1.5
CDK5RAP2-216ENST00000483412 KRTAP1-5Q9BYS1 174 aa5.69□□□□□ -1.5
CDK5RAP2-216ENST00000483412 COL6A5A8TX70 2615 aa5.69□□□□□ -1.5
CDK5RAP2-216ENST00000483412 FRYLO94915 3013 aa5.68□□□□□ -1.5
CDK5RAP2-216ENST00000483412 KRTAP29-1A8MX34 341 aaPredicted RBP5.68□□□□□ -1.5
CDK5RAP2-216ENST00000483412 DMXL2Q8TDJ6 3036 aa5.67□□□□□ -1.5
CDK5RAP2-216ENST00000483412 REV3LO60673 3130 aa5.67□□□□□ -1.5
CDK5RAP2-216ENST00000483412 ATMQ13315 3056 aa5.67□□□□□ -1.5
CDK5RAP2-216ENST00000483412 EYSQ5T1H1 3165 aa5.67□□□□□ -1.5
CDK5RAP2-216ENST00000483412 A6NN06 94 aa5.67□□□□□ -1.5
CDK5RAP2-216ENST00000483412 BOD1L1Q8NFC6 3051 aa5.67□□□□□ -1.5
CDK5RAP2-216ENST00000483412 SETXQ7Z333 2677 aaKnown RBP5.66□□□□□ -1.5
CDK5RAP2-216ENST00000483412 FLNCQ14315 2725 aa5.65□□□□□ -1.5
CDK5RAP2-216ENST00000483412 M0R2T5 61 aa5.65□□□□□ -1.51
CDK5RAP2-216ENST00000483412 STAB1Q9NY15 2570 aa5.64□□□□□ -1.51
CDK5RAP2-216ENST00000483412 A0A087X002 238 aa5.64□□□□□ -1.51
CDK5RAP2-216ENST00000483412 KRTAP4-16G5E9R7 235 aaPredicted RBP5.63□□□□□ -1.51
CDK5RAP2-216ENST00000483412 M0QZ58 72 aa5.62□□□□□ -1.51
CDK5RAP2-216ENST00000483412 COL12A1Q99715 3063 aa5.62□□□□□ -1.51
CDK5RAP2-216ENST00000483412 GCN1Q92616 2671 aaKnown RBP5.62□□□□□ -1.51
CDK5RAP2-216ENST00000483412 KRTAP25-1Q3LHN0 102 aa5.61□□□□□ -1.51
CDK5RAP2-216ENST00000483412 LCE6AA0A183 80 aa5.6□□□□□ -1.51
CDK5RAP2-216ENST00000483412 DMXL1Q9Y485 3027 aa5.59□□□□□ -1.51
CDK5RAP2-216ENST00000483412 ADM2Q7Z4H4 148 aa5.59□□□□□ -1.51
CDK5RAP2-216ENST00000483412 LRBAP50851 2863 aa5.59□□□□□ -1.51
CDK5RAP2-216ENST00000483412 NOTCH1P46531 2555 aa5.59□□□□□ -1.51
CDK5RAP2-216ENST00000483412 ADGRG4Q8IZF6 3080 aa5.59□□□□□ -1.52
CDK5RAP2-216ENST00000483412 FREM2Q5SZK8 3169 aa5.58□□□□□ -1.52
CDK5RAP2-216ENST00000483412 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
CDK5RAP2-216ENST00000483412 ITPR2Q14571 2701 aa5.57□□□□□ -1.52
CDK5RAP2-216ENST00000483412 UBR5O95071 2799 aaPredicted RBP5.57□□□□□ -1.52
CDK5RAP2-216ENST00000483412 ITPR1Q14643 2758 aa5.57□□□□□ -1.52
CDK5RAP2-216ENST00000483412 UTP20O75691 2785 aaKnown RBP5.56□□□□□ -1.52
CDK5RAP2-216ENST00000483412 KRTAP10-2P60368 255 aa5.56□□□□□ -1.52
CDK5RAP2-216ENST00000483412 USP34Q70CQ2 3546 aa5.56□□□□□ -1.52
CDK5RAP2-216ENST00000483412 A8MU10 97 aa5.56□□□□□ -1.52
CDK5RAP2-216ENST00000483412 PANO1I0J062 215 aa5.55□□□□□ -1.52
CDK5RAP2-216ENST00000483412 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
CDK5RAP2-216ENST00000483412 SPEGQ15772 3267 aa5.55□□□□□ -1.52
CDK5RAP2-216ENST00000483412 KALRNO60229 2985 aa5.53□□□□□ -1.52
CDK5RAP2-216ENST00000483412 NBEAL2Q6ZNJ1 2754 aa5.53□□□□□ -1.52
CDK5RAP2-216ENST00000483412 TACC2O95359 2948 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms