RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
PRPF4B-205ENST00000480058 Q6ZR54 194 aa3.81□□□□□ -1.8
PRPF4B-205ENST00000480058 UBR5O95071 2799 aaPredicted RBP3.81□□□□□ -1.8
PRPF4B-205ENST00000480058 CYSTM1Q9H1C7 97 aa3.81□□□□□ -1.8
PRPF4B-205ENST00000480058 KRTAP1-3Q8IUG1 177 aa3.8□□□□□ -1.8
PRPF4B-205ENST00000480058 TEX15Q9BXT5 2789 aa3.8□□□□□ -1.8
PRPF4B-205ENST00000480058 KRTAP10-11P60412 298 aa3.8□□□□□ -1.8
PRPF4B-205ENST00000480058 KRTAP4-16G5E9R7 235 aaPredicted RBP3.79□□□□□ -1.8
PRPF4B-205ENST00000480058 KRTAP26-1Q6PEX3 210 aa3.79□□□□□ -1.8
PRPF4B-205ENST00000480058 A0A0G2JQZ4 141 aa3.78□□□□□ -1.8
PRPF4B-205ENST00000480058 OXTP01178 125 aa3.78□□□□□ -1.8
PRPF4B-205ENST00000480058 CASC10Q5T4H9 136 aa3.78□□□□□ -1.8
PRPF4B-205ENST00000480058 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
PRPF4B-205ENST00000480058 Q8NDZ9 215 aa3.78□□□□□ -1.8
PRPF4B-205ENST00000480058 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
PRPF4B-205ENST00000480058 Q5W150 140 aa3.77□□□□□ -1.81
PRPF4B-205ENST00000480058 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
PRPF4B-205ENST00000480058 EP400Q96L91 3159 aa3.76□□□□□ -1.81
PRPF4B-205ENST00000480058 SPATA8Q6RVD6 105 aa3.76□□□□□ -1.81
PRPF4B-205ENST00000480058 Q8N1X5 172 aa3.76□□□□□ -1.81
PRPF4B-205ENST00000480058 IGSF10Q6WRI0 2623 aa3.75□□□□□ -1.81
PRPF4B-205ENST00000480058 RPL37P61927 97 aaKnown RBP3.75□□□□□ -1.81
PRPF4B-205ENST00000480058 LINC00483Q53H64 154 aa3.75□□□□□ -1.81
PRPF4B-205ENST00000480058 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
PRPF4B-205ENST00000480058 TNRC18O15417 2968 aaPredicted RBP3.74□□□□□ -1.81
PRPF4B-205ENST00000480058 SPINK7P58062 85 aa3.73□□□□□ -1.81
PRPF4B-205ENST00000480058 NIPBLQ6KC79 2804 aaeCLIP3.72□□□□□ -1.813e-13■□□□□ 9
PRPF4B-205ENST00000480058 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
PRPF4B-205ENST00000480058 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.71□□□□□ -1.81
PRPF4B-205ENST00000480058 H3BS24 57 aa3.7□□□□□ -1.82
PRPF4B-205ENST00000480058 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
PRPF4B-205ENST00000480058 ROMO1P60602 79 aa3.69□□□□□ -1.82
PRPF4B-205ENST00000480058 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
PRPF4B-205ENST00000480058 Q6ZSA8 131 aa3.69□□□□□ -1.82
PRPF4B-205ENST00000480058 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
PRPF4B-205ENST00000480058 A6NN06 94 aa3.68□□□□□ -1.82
PRPF4B-205ENST00000480058 HIVEP1P15822 2718 aa3.68□□□□□ -1.82
PRPF4B-205ENST00000480058 A0A0D9SG42 100 aa3.68□□□□□ -1.82
PRPF4B-205ENST00000480058 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
PRPF4B-205ENST00000480058 J3QL48 77 aa3.67□□□□□ -1.82
PRPF4B-205ENST00000480058 H1FX-AS1Q4G0G2 97 aa3.66□□□□□ -1.82
PRPF4B-205ENST00000480058 NBEAL2Q6ZNJ1 2754 aa3.65□□□□□ -1.83
PRPF4B-205ENST00000480058 R4GN34 69 aa3.63□□□□□ -1.83
PRPF4B-205ENST00000480058 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
PRPF4B-205ENST00000480058 TENM3Q9P273 2699 aa3.62□□□□□ -1.83
PRPF4B-205ENST00000480058 S4R3F8 94 aa3.61□□□□□ -1.83
PRPF4B-205ENST00000480058 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
PRPF4B-205ENST00000480058 PANO1I0J062 215 aa3.61□□□□□ -1.83
PRPF4B-205ENST00000480058 M0QZ58 72 aa3.6□□□□□ -1.83
PRPF4B-205ENST00000480058 SMR3BP02814 79 aaPredicted RBP3.59□□□□□ -1.83
PRPF4B-205ENST00000480058 ITPR1Q14643 2758 aa3.59□□□□□ -1.84
PRPF4B-205ENST00000480058 KRTAP25-1Q3LHN0 102 aa3.58□□□□□ -1.84
PRPF4B-205ENST00000480058 FLNCQ14315 2725 aa3.58□□□□□ -1.84
PRPF4B-205ENST00000480058 KRTAP13-1Q8IUC0 172 aa3.58□□□□□ -1.84
PRPF4B-205ENST00000480058 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
PRPF4B-205ENST00000480058 CHD9Q3L8U1 2897 aa3.56□□□□□ -1.84
PRPF4B-205ENST00000480058 TENM4Q6N022 2769 aa3.55□□□□□ -1.84
PRPF4B-205ENST00000480058 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
PRPF4B-205ENST00000480058 UTP20O75691 2785 aaKnown RBP3.53□□□□□ -1.84
PRPF4B-205ENST00000480058 Q6ZRN7 208 aaPredicted RBP3.52□□□□□ -1.85
PRPF4B-205ENST00000480058 EYSQ5T1H1 3165 aa3.51□□□□□ -1.85
PRPF4B-205ENST00000480058 KRTAP7-1Q8IUC3 87 aa3.5□□□□□ -1.85
PRPF4B-205ENST00000480058 PP632Q6XCG6 107 aa3.5□□□□□ -1.85
PRPF4B-205ENST00000480058 KRTAP11-1Q8IUC1 163 aa3.49□□□□□ -1.85
PRPF4B-205ENST00000480058 KRTAP10-1P60331 282 aa3.49□□□□□ -1.85
PRPF4B-205ENST00000480058 ITPR2Q14571 2701 aa3.49□□□□□ -1.85
PRPF4B-205ENST00000480058 A8MUU9 505 aa3.48□□□□□ -1.85
PRPF4B-205ENST00000480058 C20orf166-AS1Q96NR2 134 aa3.46□□□□□ -1.86
PRPF4B-205ENST00000480058 DSPP15924 2871 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-205ENST00000480058 TRANK1O15050 2925 aa3.44□□□□□ -1.86
PRPF4B-205ENST00000480058 CEP350Q5VT06 3117 aa3.44□□□□□ -1.86
PRPF4B-205ENST00000480058 KRTAP10-2P60368 255 aa3.43□□□□□ -1.86
PRPF4B-205ENST00000480058 KRTAP13-2Q52LG2 175 aa3.43□□□□□ -1.86
PRPF4B-205ENST00000480058 MGAQ8IWI9 3026 aa3.43□□□□□ -1.86
PRPF4B-205ENST00000480058 ADM2Q7Z4H4 148 aa3.43□□□□□ -1.86
PRPF4B-205ENST00000480058 KALRNO60229 2985 aa3.41□□□□□ -1.86
PRPF4B-205ENST00000480058 CHD7Q9P2D1 2997 aa3.4□□□□□ -1.86
PRPF4B-205ENST00000480058 PLAC4Q8WY50 150 aa3.4□□□□□ -1.86
PRPF4B-205ENST00000480058 Q5VSD8 79 aa3.4□□□□□ -1.87
PRPF4B-205ENST00000480058 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
PRPF4B-205ENST00000480058 M0R2T5 61 aa3.4□□□□□ -1.87
PRPF4B-205ENST00000480058 TNP1P09430 55 aa3.39□□□□□ -1.87
PRPF4B-205ENST00000480058 APCP25054 2843 aa3.39□□□□□ -1.87
PRPF4B-205ENST00000480058 A8MU10 97 aa3.38□□□□□ -1.87
PRPF4B-205ENST00000480058 SRCAPQ6ZRS2 3230 aa3.38□□□□□ -1.87
PRPF4B-205ENST00000480058 A0A0C4DFX4 3053 aa3.38□□□□□ -1.87
PRPF4B-205ENST00000480058 ZFHX4Q86UP3 3567 aa3.38□□□□□ -1.87
PRPF4B-205ENST00000480058 DNAH12Q6ZR08 3092 aa3.38□□□□□ -1.87
PRPF4B-205ENST00000480058 KRTAP21-3Q3LHN1 58 aa3.35□□□□□ -1.87
PRPF4B-205ENST00000480058 TACC2O95359 2948 aa3.35□□□□□ -1.87
PRPF4B-205ENST00000480058 TENM1Q9UKZ4 2725 aa3.35□□□□□ -1.87
PRPF4B-205ENST00000480058 P0C880 135 aa3.34□□□□□ -1.88
PRPF4B-205ENST00000480058 CELSR2Q9HCU4 2923 aa3.34□□□□□ -1.88
PRPF4B-205ENST00000480058 UNC80Q8N2C7 3258 aa3.32□□□□□ -1.88
PRPF4B-205ENST00000480058 KRTAP1-4P0C5Y4 121 aa3.31□□□□□ -1.88
PRPF4B-205ENST00000480058 NF1P21359 2839 aa3.31□□□□□ -1.88
PRPF4B-205ENST00000480058 TENM2Q9NT68 2774 aa3.3□□□□□ -1.88
PRPF4B-205ENST00000480058 KRTAP13-3Q3SY46 172 aa3.3□□□□□ -1.88
PRPF4B-205ENST00000480058 VWFP04275 2813 aa3.3□□□□□ -1.88
PRPF4B-205ENST00000480058 FRYQ5TBA9 3013 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms