RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 ZCCHC13Q8WW36 166 aaKnown RBP11.99□□□□□ -0.49
ABCA2-217ENST00000479446 Q6ZSA8 131 aa11.98□□□□□ -0.49
ABCA2-217ENST00000479446 KRTAP26-1Q6PEX3 210 aa11.96□□□□□ -0.49
ABCA2-217ENST00000479446 CFAP54Q96N23 3096 aa11.94□□□□□ -0.5
ABCA2-217ENST00000479446 Q5W150 140 aa11.93□□□□□ -0.5
ABCA2-217ENST00000479446 Q5VV11 94 aa11.91□□□□□ -0.5
ABCA2-217ENST00000479446 NBEAL1Q6ZS30 2694 aa11.91□□□□□ -0.5
ABCA2-217ENST00000479446 TEX15Q9BXT5 2789 aa11.91□□□□□ -0.5
ABCA2-217ENST00000479446 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
ABCA2-217ENST00000479446 KRTAP1-5Q9BYS1 174 aa11.89□□□□□ -0.51
ABCA2-217ENST00000479446 TEP1Q99973 2627 aaKnown RBP11.88□□□□□ -0.51
ABCA2-217ENST00000479446 GCN1Q92616 2671 aaKnown RBP11.87□□□□□ -0.51
ABCA2-217ENST00000479446 UNC79Q9P2D8 2635 aa11.87□□□□□ -0.51
ABCA2-217ENST00000479446 A0A0C4DFX4 3053 aa11.86□□□□□ -0.51
ABCA2-217ENST00000479446 ZNF292O60281 2723 aa11.85□□□□□ -0.51
ABCA2-217ENST00000479446 LUZP6Q538Z0 58 aa11.84□□□□□ -0.51
ABCA2-217ENST00000479446 RANBP2P49792 3224 aaKnown RBP11.84□□□□□ -0.51
ABCA2-217ENST00000479446 HTTP42858 3142 aa11.83□□□□□ -0.52
ABCA2-217ENST00000479446 DMAC1Q96GE9 116 aa11.83□□□□□ -0.52
ABCA2-217ENST00000479446 CAMK2N1Q7Z7J9 78 aa11.81□□□□□ -0.52
ABCA2-217ENST00000479446 NOTCH1P46531 2555 aa11.8□□□□□ -0.52
ABCA2-217ENST00000479446 SPINK7P58062 85 aa11.8□□□□□ -0.52
ABCA2-217ENST00000479446 OXTP01178 125 aa11.79□□□□□ -0.52
ABCA2-217ENST00000479446 TRANK1O15050 2925 aa11.79□□□□□ -0.52
ABCA2-217ENST00000479446 CSAG1Q6PB30 78 aa11.78□□□□□ -0.52
ABCA2-217ENST00000479446 M0R2T5 61 aa11.77□□□□□ -0.53
ABCA2-217ENST00000479446 PRAC1Q96KF2 57 aa11.77□□□□□ -0.53
ABCA2-217ENST00000479446 COL6A5A8TX70 2615 aa11.76□□□□□ -0.53
ABCA2-217ENST00000479446 KRTAP4-16G5E9R7 235 aaPredicted RBP11.74□□□□□ -0.53
ABCA2-217ENST00000479446 S4R3F8 94 aa11.74□□□□□ -0.53
ABCA2-217ENST00000479446 LINC00483Q53H64 154 aa11.71□□□□□ -0.53
ABCA2-217ENST00000479446 FLG2Q5D862 2391 aaPredicted RBP11.71□□□□□ -0.53
ABCA2-217ENST00000479446 SETXQ7Z333 2677 aaKnown RBP11.67□□□□□ -0.54
ABCA2-217ENST00000479446 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.54
ABCA2-217ENST00000479446 Q6ZR54 194 aa11.65□□□□□ -0.54
ABCA2-217ENST00000479446 NBEAL2Q6ZNJ1 2754 aa11.63□□□□□ -0.55
ABCA2-217ENST00000479446 WDFY4Q6ZS81 3184 aa11.61□□□□□ -0.55
ABCA2-217ENST00000479446 KRTAP10-1P60331 282 aa11.61□□□□□ -0.55
ABCA2-217ENST00000479446 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
ABCA2-217ENST00000479446 MAP1AP78559 2803 aaPredicted RBP11.6□□□□□ -0.55
ABCA2-217ENST00000479446 PANO1I0J062 215 aa11.57□□□□□ -0.56
ABCA2-217ENST00000479446 KRTAP10-2P60368 255 aa11.57□□□□□ -0.56
ABCA2-217ENST00000479446 LAMA3Q16787 3333 aa11.56□□□□□ -0.56
ABCA2-217ENST00000479446 UBR5O95071 2799 aaPredicted RBP11.55□□□□□ -0.56
ABCA2-217ENST00000479446 R4GN34 69 aa11.55□□□□□ -0.56
ABCA2-217ENST00000479446 RPL37P61927 97 aaKnown RBP11.54□□□□□ -0.56
ABCA2-217ENST00000479446 DMBT1Q9UGM3 2413 aaPredicted RBP11.54□□□□□ -0.56
ABCA2-217ENST00000479446 DSPP15924 2871 aaKnown RBP11.53□□□□□ -0.56
ABCA2-217ENST00000479446 MKI67P46013 3256 aaKnown RBP11.51□□□□□ -0.57
ABCA2-217ENST00000479446 H1FX-AS1Q4G0G2 97 aa11.48□□□□□ -0.57
ABCA2-217ENST00000479446 SEC61BP60468 96 aaKnown RBP11.47□□□□□ -0.57
ABCA2-217ENST00000479446 IGSF10Q6WRI0 2623 aa11.47□□□□□ -0.57
ABCA2-217ENST00000479446 Q5VSD8 79 aa11.46□□□□□ -0.58
ABCA2-217ENST00000479446 ROMO1P60602 79 aa11.46□□□□□ -0.58
ABCA2-217ENST00000479446 STAB2Q8WWQ8 2551 aa11.44□□□□□ -0.58
ABCA2-217ENST00000479446 LCE6AA0A183 80 aa11.43□□□□□ -0.58
ABCA2-217ENST00000479446 FRYQ5TBA9 3013 aa11.41□□□□□ -0.58
ABCA2-217ENST00000479446 A0A087X002 238 aa11.41□□□□□ -0.58
ABCA2-217ENST00000479446 TRIOO75962 3097 aa11.4□□□□□ -0.58
ABCA2-217ENST00000479446 ASB16-AS1Q495Z4 193 aa11.39□□□□□ -0.59
ABCA2-217ENST00000479446 H3BS24 57 aa11.39□□□□□ -0.59
ABCA2-217ENST00000479446 NOTCH2NLQ7Z3S9 236 aa11.39□□□□□ -0.59
ABCA2-217ENST00000479446 NSD1Q96L73 2696 aaPredicted RBP11.35□□□□□ -0.59
ABCA2-217ENST00000479446 KRTAP11-1Q8IUC1 163 aa11.34□□□□□ -0.59
ABCA2-217ENST00000479446 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.59
ABCA2-217ENST00000479446 BRCA2P51587 3418 aa11.33□□□□□ -0.6
ABCA2-217ENST00000479446 M0QZ58 72 aa11.33□□□□□ -0.6
ABCA2-217ENST00000479446 VPS13AQ96RL7 3174 aa11.32□□□□□ -0.6
ABCA2-217ENST00000479446 SPATA8Q6RVD6 105 aa11.31□□□□□ -0.6
ABCA2-217ENST00000479446 KRTAP7-1Q8IUC3 87 aa11.31□□□□□ -0.6
ABCA2-217ENST00000479446 A0A0A0MQY5 61 aa11.3□□□□□ -0.6
ABCA2-217ENST00000479446 ITPR1Q14643 2758 aa11.26□□□□□ -0.61
ABCA2-217ENST00000479446 Q6ZRN7 208 aaPredicted RBP11.26□□□□□ -0.61
ABCA2-217ENST00000479446 ADM2Q7Z4H4 148 aa11.23□□□□□ -0.61
ABCA2-217ENST00000479446 ITPR2Q14571 2701 aa11.22□□□□□ -0.61
ABCA2-217ENST00000479446 BAHCC1Q9P281 2608 aa11.22□□□□□ -0.61
ABCA2-217ENST00000479446 UNC80Q8N2C7 3258 aa11.22□□□□□ -0.61
ABCA2-217ENST00000479446 XIRP2A4UGR9 3374 aa11.21□□□□□ -0.62
ABCA2-217ENST00000479446 RPS29P62273 56 aaKnown RBP11.2□□□□□ -0.62
ABCA2-217ENST00000479446 KRTAP13-1Q8IUC0 172 aa11.17□□□□□ -0.62
ABCA2-217ENST00000479446 KALRNO60229 2985 aa11.15□□□□□ -0.62
ABCA2-217ENST00000479446 A6NN06 94 aa11.14□□□□□ -0.63
ABCA2-217ENST00000479446 FREM2Q5SZK8 3169 aa11.14□□□□□ -0.63
ABCA2-217ENST00000479446 FLNCQ14315 2725 aa11.13□□□□□ -0.63
ABCA2-217ENST00000479446 TACC2O95359 2948 aa11.1□□□□□ -0.63
ABCA2-217ENST00000479446 KRTAP13-2Q52LG2 175 aa11.09□□□□□ -0.63
ABCA2-217ENST00000479446 ATMQ13315 3056 aa11.02□□□□□ -0.64
ABCA2-217ENST00000479446 UTP20O75691 2785 aaKnown RBP11.02□□□□□ -0.65
ABCA2-217ENST00000479446 NBEAQ8NFP9 2946 aa11.02□□□□□ -0.65
ABCA2-217ENST00000479446 A8MU10 97 aa11.02□□□□□ -0.65
ABCA2-217ENST00000479446 KRTAP25-1Q3LHN0 102 aa11□□□□□ -0.65
ABCA2-217ENST00000479446 DMXL2Q8TDJ6 3036 aa11□□□□□ -0.65
ABCA2-217ENST00000479446 PLAC4Q8WY50 150 aa11□□□□□ -0.65
ABCA2-217ENST00000479446 APCP25054 2843 aa10.99□□□□□ -0.65
ABCA2-217ENST00000479446 ASH1LQ9NR48 2969 aaKnown RBP10.96□□□□□ -0.66
ABCA2-217ENST00000479446 CELSR3Q9NYQ7 3312 aa10.95□□□□□ -0.66
ABCA2-217ENST00000479446 COL12A1Q99715 3063 aa10.93□□□□□ -0.66
ABCA2-217ENST00000479446 KMT2BQ9UMN6 2715 aaPredicted RBP10.92□□□□□ -0.66
ABCA2-217ENST00000479446 NIPBLQ6KC79 2804 aaeCLIP10.91□□□□□ -0.66
ABCA2-217ENST00000479446 HIVEP1P15822 2718 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms