RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 MYO15AQ9UKN7 3530 aa-0.9□□□□□ -2.55
LTN1-204ENST00000475344 CHD7Q9P2D1 2997 aa-0.9□□□□□ -2.55
LTN1-204ENST00000475344 A0A0C4DFX4 3053 aa-0.91□□□□□ -2.55
LTN1-204ENST00000475344 TIAM2Q8IVF5 1701 aa-0.91□□□□□ -2.55
LTN1-204ENST00000475344 UTP20O75691 2785 aaKnown RBP-0.91□□□□□ -2.56
LTN1-204ENST00000475344 A0A1B0GUT8 65 aa-0.91□□□□□ -2.56
LTN1-204ENST00000475344 MT1BP07438 61 aa-0.91□□□□□ -2.56
LTN1-204ENST00000475344 MT1HP80294 61 aa-0.91□□□□□ -2.56
LTN1-204ENST00000475344 GAFA1Q96PS6 74 aa-0.91□□□□□ -2.56
LTN1-204ENST00000475344 MYO3AQ8NEV4 1616 aa-0.91□□□□□ -2.56
LTN1-204ENST00000475344 TROQ12816 1431 aaPredicted RBP-0.91□□□□□ -2.56
LTN1-204ENST00000475344 MTORP42345 2549 aa-0.91□□□□□ -2.56
LTN1-204ENST00000475344 DNAH17Q9UFH2 4485 aa-0.91□□□□□ -2.56
LTN1-204ENST00000475344 NEXMIFQ5QGS0 1516 aa-0.92□□□□□ -2.56
LTN1-204ENST00000475344 IQCF6A8MYZ5 107 aa-0.92□□□□□ -2.56
LTN1-204ENST00000475344 MT1AP04731 61 aa-0.92□□□□□ -2.56
LTN1-204ENST00000475344 PLGLAQ15195 96 aa-0.92□□□□□ -2.56
LTN1-204ENST00000475344 LRRC9Q6ZRR7 1453 aa-0.92□□□□□ -2.56
LTN1-204ENST00000475344 LTN1O94822 1766 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.93□□□□□ -2.56
LTN1-204ENST00000475344 GYPAP02724 150 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 PEA15Q15121 130 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 COX6B2Q6YFQ2 88 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 VPS8Q8N3P4 1428 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 POLR1AO95602 1720 aaPredicted RBP-0.93□□□□□ -2.56
LTN1-204ENST00000475344 SMG1Q96Q15 3661 aaKnown RBP-0.93□□□□□ -2.56
LTN1-204ENST00000475344 ATP7BP35670 1465 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 MGAM2Q2M2H8 2515 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 CSMD1Q96PZ7 3565 aa-0.93□□□□□ -2.56
LTN1-204ENST00000475344 RIF1Q5UIP0 2472 aaKnown RBP-0.94□□□□□ -2.56
LTN1-204ENST00000475344 RELNP78509 3460 aa-0.94□□□□□ -2.56
LTN1-204ENST00000475344 FAM186AA6NE01 2351 aa-0.94□□□□□ -2.56
LTN1-204ENST00000475344 DMXL2Q8TDJ6 3036 aa-0.94□□□□□ -2.56
LTN1-204ENST00000475344 SMIM11AP58511 58 aa-0.94□□□□□ -2.56
LTN1-204ENST00000475344 PKIAP61925 76 aa-0.94□□□□□ -2.56
LTN1-204ENST00000475344 SCN11AQ9UI33 1791 aa-0.94□□□□□ -2.56
LTN1-204ENST00000475344 SPENQ96T58 3664 aaKnown RBP-0.95□□□□□ -2.56
LTN1-204ENST00000475344 RPL38P63173 70 aaKnown RBP-0.95□□□□□ -2.56
LTN1-204ENST00000475344 MT1XP80297 61 aa-0.95□□□□□ -2.56
LTN1-204ENST00000475344 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.96□□□□□ -2.56
LTN1-204ENST00000475344 CEP290O15078 2479 aa-0.96□□□□□ -2.56
LTN1-204ENST00000475344 TRAV21A0A0B4J279 112 aa-0.96□□□□□ -2.56
LTN1-204ENST00000475344 S100A8P05109 93 aa-0.96□□□□□ -2.56
LTN1-204ENST00000475344 DOT1LQ8TEK3 1739 aa-0.96□□□□□ -2.56
LTN1-204ENST00000475344 CEP295Q9C0D2 2601 aa-0.97□□□□□ -2.56
LTN1-204ENST00000475344 CEP162Q5TB80 1403 aa-0.98□□□□□ -2.57
LTN1-204ENST00000475344 H3BNG1 76 aa-0.98□□□□□ -2.57
LTN1-204ENST00000475344 CYB5AP00167 134 aa-0.98□□□□□ -2.57
LTN1-204ENST00000475344 MT1MQ8N339 61 aa-0.98□□□□□ -2.57
LTN1-204ENST00000475344 BOD1L1Q8NFC6 3051 aa-0.98□□□□□ -2.57
LTN1-204ENST00000475344 CSMD2Q7Z408 3487 aa-0.98□□□□□ -2.57
LTN1-204ENST00000475344 TMEM131LA2VDJ0 1609 aa-0.99□□□□□ -2.57
LTN1-204ENST00000475344 ZNF831Q5JPB2 1677 aa-0.99□□□□□ -2.57
LTN1-204ENST00000475344 MT2AP02795 61 aa-0.99□□□□□ -2.57
LTN1-204ENST00000475344 WFDC9Q8NEX5 89 aa-0.99□□□□□ -2.57
LTN1-204ENST00000475344 TRIOO75962 3097 aa-0.99□□□□□ -2.57
LTN1-204ENST00000475344 ADGRG4Q8IZF6 3080 aa-0.99□□□□□ -2.57
LTN1-204ENST00000475344 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.99□□□□□ -2.57
LTN1-204ENST00000475344 USP32Q8NFA0 1604 aa-1□□□□□ -2.57
LTN1-204ENST00000475344 PKD1L2Q7Z442 2459 aa-1□□□□□ -2.57
LTN1-204ENST00000475344 MYMXA0A1B0GTQ4 84 aa-1□□□□□ -2.57
LTN1-204ENST00000475344 NESP48681 1621 aa-1□□□□□ -2.57
LTN1-204ENST00000475344 H0YAA0 97 aa-1.01□□□□□ -2.57
LTN1-204ENST00000475344 TRRAPQ9Y4A5 3859 aa-1.01□□□□□ -2.57
LTN1-204ENST00000475344 CFAP46Q8IYW2 2715 aa-1.02□□□□□ -2.57
LTN1-204ENST00000475344 FRYQ5TBA9 3013 aa-1.02□□□□□ -2.57
LTN1-204ENST00000475344 ZFHX4Q86UP3 3567 aa-1.02□□□□□ -2.57
LTN1-204ENST00000475344 PRO3102Q9H379 93 aa-1.02□□□□□ -2.57
LTN1-204ENST00000475344 DNAH8Q96JB1 4490 aa-1.03□□□□□ -2.57
LTN1-204ENST00000475344 NWD1Q149M9 1564 aa-1.03□□□□□ -2.57
LTN1-204ENST00000475344 MT1GP13640 62 aa-1.03□□□□□ -2.57
LTN1-204ENST00000475344 PYY3Q5JQD4 70 aa-1.03□□□□□ -2.57
LTN1-204ENST00000475344 DNAH10Q8IVF4 4471 aa-1.03□□□□□ -2.57
LTN1-204ENST00000475344 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.04□□□□□ -2.58
LTN1-204ENST00000475344 C3orf79P0CE67 100 aa-1.04□□□□□ -2.58
LTN1-204ENST00000475344 LINC00158P58513 81 aa-1.04□□□□□ -2.58
LTN1-204ENST00000475344 C5orf42Q9H799 3197 aa-1.04□□□□□ -2.58
LTN1-204ENST00000475344 ANKRD50Q9ULJ7 1429 aa-1.05□□□□□ -2.58
LTN1-204ENST00000475344 PPLO60437 1756 aa-1.05□□□□□ -2.58
LTN1-204ENST00000475344 KRTAP19-5Q3LI72 72 aa-1.05□□□□□ -2.58
LTN1-204ENST00000475344 S100A16Q96FQ6 103 aaKnown RBP-1.05□□□□□ -2.58
LTN1-204ENST00000475344 PLXNC1O60486 1568 aa-1.05□□□□□ -2.58
LTN1-204ENST00000475344 BPTFQ12830 3046 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 C9orf92A6NGG3 77 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 K7EP34 96 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 MT1EP04732 61 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 DEFB1P60022 68 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 SNRPFP62306 86 aaKnown RBP-1.06□□□□□ -2.58
LTN1-204ENST00000475344 LINC00643Q86TS7 51 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 Q9H521 79 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 PRUNE2Q8WUY3 3088 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 ARFGEF2Q9Y6D5 1785 aa-1.06□□□□□ -2.58
LTN1-204ENST00000475344 TLN1Q9Y490 2541 aaKnown RBP-1.07□□□□□ -2.58
LTN1-204ENST00000475344 WIZO95785 1651 aa-1.07□□□□□ -2.58
LTN1-204ENST00000475344 PLIN4Q96Q06 1357 aa-1.07□□□□□ -2.58
LTN1-204ENST00000475344 CEBPZOSA8MTT3 80 aa-1.07□□□□□ -2.58
LTN1-204ENST00000475344 MT1LQ93083 61 aa-1.07□□□□□ -2.58
LTN1-204ENST00000475344 RABAC1Q9UI14 185 aa-1.07□□□□□ -2.58
LTN1-204ENST00000475344 NCOA2Q15596 1464 aa-1.07□□□□□ -2.58
LTN1-204ENST00000475344 RANBP2P49792 3224 aaKnown RBP-1.08□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms