RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 PRR4Q16378 134 aa7.16□□□□□ -1.26
DDX56-209ENST00000473924 SMIM29Q86T20 159 aa7.16□□□□□ -1.26
DDX56-209ENST00000473924 FAM218AQ96MZ4 157 aa7.16□□□□□ -1.26
DDX56-209ENST00000473924 A0A1B0GX51 115 aa7.15□□□□□ -1.26
DDX56-209ENST00000473924 OCIAD2Q56VL3 154 aa7.15□□□□□ -1.26
DDX56-209ENST00000473924 PPDPFLQ8WWR9 84 aa7.14□□□□□ -1.27
DDX56-209ENST00000473924 CLEC2BQ92478 149 aa7.14□□□□□ -1.27
DDX56-209ENST00000473924 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
DDX56-209ENST00000473924 SNHG12Q9BXW3 62 aa7.14□□□□□ -1.27
DDX56-209ENST00000473924 SCGB1C2P0DMR2 95 aa7.13□□□□□ -1.27
DDX56-209ENST00000473924 DNAL4O96015 105 aa7.12□□□□□ -1.27
DDX56-209ENST00000473924 GHRHP01286 108 aa7.12□□□□□ -1.27
DDX56-209ENST00000473924 BATFQ16520 125 aa7.12□□□□□ -1.27
DDX56-209ENST00000473924 HRCT1Q6UXD1 115 aa7.12□□□□□ -1.27
DDX56-209ENST00000473924 RPS29P62273 56 aaKnown RBP7.11□□□□□ -1.27
DDX56-209ENST00000473924 FABP2P12104 132 aa7.09□□□□□ -1.27
DDX56-209ENST00000473924 CD164Q04900 197 aa7.08□□□□□ -1.28
DDX56-209ENST00000473924 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
DDX56-209ENST00000473924 HMCN2Q8NDA2 5059 aa7.07□□□□□ -1.28
DDX56-209ENST00000473924 A0A0G2JQZ4 141 aa7.07□□□□□ -1.28
DDX56-209ENST00000473924 Q6JHZ5 121 aa7.07□□□□□ -1.28
DDX56-209ENST00000473924 NAA38Q9BRA0 125 aaKnown RBP7.07□□□□□ -1.28
DDX56-209ENST00000473924 ORMDL1Q9P0S3 153 aa7.07□□□□□ -1.28
DDX56-209ENST00000473924 IGLV8-61A0A075B6I0 122 aa7.06□□□□□ -1.28
DDX56-209ENST00000473924 NDUFV3P56181 108 aaKnown RBP7.06□□□□□ -1.28
DDX56-209ENST00000473924 IGLV7-46A0A075B6I9 117 aa7.05□□□□□ -1.28
DDX56-209ENST00000473924 H3BQ85 93 aa7.05□□□□□ -1.28
DDX56-209ENST00000473924 H3BUT2 72 aa7.05□□□□□ -1.28
DDX56-209ENST00000473924 LST1O00453 97 aa7.05□□□□□ -1.28
DDX56-209ENST00000473924 TRACP01848 142 aa7.05□□□□□ -1.28
DDX56-209ENST00000473924 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
DDX56-209ENST00000473924 FP248Q71RG6 208 aaPredicted RBP7.04□□□□□ -1.28
DDX56-209ENST00000473924 H3BMG7 143 aa7.03□□□□□ -1.28
DDX56-209ENST00000473924 TMEM256-PLSCR3K7ERE1 68 aa7.03□□□□□ -1.28
DDX56-209ENST00000473924 LYRM7Q5U5X0 104 aa7.02□□□□□ -1.29
DDX56-209ENST00000473924 ATXN8Q156A1 80 aa7.01□□□□□ -1.29
DDX56-209ENST00000473924 TCL1BO95988 128 aa7□□□□□ -1.29
DDX56-209ENST00000473924 A0A1B0GV72 72 aa6.99□□□□□ -1.29
DDX56-209ENST00000473924 Q5XG85 94 aa6.99□□□□□ -1.29
DDX56-209ENST00000473924 TRBV7-7A0A0K0K1E9 115 aa6.98□□□□□ -1.29
DDX56-209ENST00000473924 C9orf118A6NHY6 69 aa6.98□□□□□ -1.29
DDX56-209ENST00000473924 UBE2V1Q13404 147 aa6.98□□□□□ -1.29
DDX56-209ENST00000473924 TPRXLQ17RH7 258 aa6.98□□□□□ -1.29
DDX56-209ENST00000473924 CDIP1Q9H305 208 aa6.98□□□□□ -1.29
DDX56-209ENST00000473924 TRBV20-1A0A075B6N2 111 aa6.97□□□□□ -1.29
DDX56-209ENST00000473924 TAX1BP3O14907 124 aa6.97□□□□□ -1.29
DDX56-209ENST00000473924 BAALC-AS2P0C853 105 aa6.97□□□□□ -1.29
DDX56-209ENST00000473924 PCP4L1A6NKN8 68 aa6.96□□□□□ -1.3
DDX56-209ENST00000473924 TEN1Q86WV5 123 aa6.96□□□□□ -1.3
DDX56-209ENST00000473924 ANKRD29Q8N6D5 301 aa6.96□□□□□ -1.3
DDX56-209ENST00000473924 LRP2P98164 4655 aa6.95□□□□□ -1.3
DDX56-209ENST00000473924 A0A1W2PPM0 123 aa6.94□□□□□ -1.3
DDX56-209ENST00000473924 COL5A1-AS1Q5SY13 56 aa6.94□□□□□ -1.3
DDX56-209ENST00000473924 Q6Q795 121 aa6.94□□□□□ -1.3
DDX56-209ENST00000473924 LPAP08519 4548 aa6.94□□□□□ -1.3
DDX56-209ENST00000473924 UBR4Q5T4S7 5183 aa6.94□□□□□ -1.3
DDX56-209ENST00000473924 C1orf195Q5TG92 126 aa6.93□□□□□ -1.3
DDX56-209ENST00000473924 C9JAW5 83 aa6.92□□□□□ -1.3
DDX56-209ENST00000473924 RBM3P98179 157 aaKnown RBP6.92□□□□□ -1.3
DDX56-209ENST00000473924 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
DDX56-209ENST00000473924 SS18L2Q9UHA2 77 aa6.92□□□□□ -1.3
DDX56-209ENST00000473924 ASB16-AS1Q495Z4 193 aa6.91□□□□□ -1.3
DDX56-209ENST00000473924 DSCR8Q96T75 97 aa6.91□□□□□ -1.3
DDX56-209ENST00000473924 A0A087WSZ3 146 aa6.9□□□□□ -1.3
DDX56-209ENST00000473924 A0A1W2PNM2 257 aa6.9□□□□□ -1.3
DDX56-209ENST00000473924 CCKP06307 115 aa6.89□□□□□ -1.31
DDX56-209ENST00000473924 VPS25Q9BRG1 176 aa6.89□□□□□ -1.31
DDX56-209ENST00000473924 TRBV7-4A0A0J9YYF1 115 aa6.88□□□□□ -1.31
DDX56-209ENST00000473924 JMJD7-PLA2G4BH0Y9G9 81 aa6.88□□□□□ -1.31
DDX56-209ENST00000473924 SPCS1Q9Y6A9 102 aa6.88□□□□□ -1.31
DDX56-209ENST00000473924 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
DDX56-209ENST00000473924 H3BT86 120 aa6.85□□□□□ -1.31
DDX56-209ENST00000473924 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
DDX56-209ENST00000473924 PDE6GP18545 87 aa6.82□□□□□ -1.32
DDX56-209ENST00000473924 XP32Q5T750 250 aa6.82□□□□□ -1.32
DDX56-209ENST00000473924 C14orf132Q9NPU4 83 aa6.82□□□□□ -1.32
DDX56-209ENST00000473924 LOC110117498A0A087WWA1 95 aa6.8□□□□□ -1.32
DDX56-209ENST00000473924 C21orf62-AS1Q17RA5 79 aa6.8□□□□□ -1.32
DDX56-209ENST00000473924 Q6ZQT0 140 aa6.8□□□□□ -1.32
DDX56-209ENST00000473924 K7EP34 96 aa6.79□□□□□ -1.32
DDX56-209ENST00000473924 OBSCN-AS1Q96MR7 158 aa6.79□□□□□ -1.32
DDX56-209ENST00000473924 Q96NJ1 140 aa6.79□□□□□ -1.32
DDX56-209ENST00000473924 SIGMAR1Q99720 223 aa6.79□□□□□ -1.32
DDX56-209ENST00000473924 SEC61BP60468 96 aaKnown RBP6.78□□□□□ -1.32
DDX56-209ENST00000473924 IGKV4-1P06312 121 aa6.77□□□□□ -1.33
DDX56-209ENST00000473924 GTF2H5Q6ZYL4 71 aa6.77□□□□□ -1.33
DDX56-209ENST00000473924 A0A1B0GW54 56 aa6.76□□□□□ -1.33
DDX56-209ENST00000473924 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
DDX56-209ENST00000473924 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
DDX56-209ENST00000473924 SMCPP49901 116 aaPredicted RBP6.74□□□□□ -1.33
DDX56-209ENST00000473924 PRO0461Q9UI25 63 aa6.72□□□□□ -1.33
DDX56-209ENST00000473924 RNF213Q63HN8 5207 aa6.71□□□□□ -1.33
DDX56-209ENST00000473924 J3KT08 172 aa6.7□□□□□ -1.34
DDX56-209ENST00000473924 DSCR10P59022 87 aa6.7□□□□□ -1.34
DDX56-209ENST00000473924 RPL37P61927 97 aaKnown RBP6.7□□□□□ -1.34
DDX56-209ENST00000473924 F8W1H4 67 aa6.69□□□□□ -1.34
DDX56-209ENST00000473924 NREPQ16612 68 aa6.69□□□□□ -1.34
DDX56-209ENST00000473924 PCOTHQ58A44 107 aa6.69□□□□□ -1.34
DDX56-209ENST00000473924 IGHV6-1A0A0B4J1U7 121 aa6.68□□□□□ -1.34
DDX56-209ENST00000473924 LINC00313P59037 77 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms