RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 IGKV3D-7A0A0C4DH55 119 aa11.04□□□□□ -0.64
VARS2-206ENST00000473916 CIRBP-AS1Q8TBR5 109 aa11.03□□□□□ -0.64
VARS2-206ENST00000473916 PKHD1P08F94 4074 aa11.02□□□□□ -0.64
VARS2-206ENST00000473916 TRBV7-7A0A0K0K1E9 115 aa11.02□□□□□ -0.65
VARS2-206ENST00000473916 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
VARS2-206ENST00000473916 KMT2CQ8NEZ4 4911 aaKnown RBP11□□□□□ -0.65
VARS2-206ENST00000473916 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
VARS2-206ENST00000473916 SCXQ7RTU7 201 aa10.99□□□□□ -0.65
VARS2-206ENST00000473916 Q6JHZ5 121 aa10.99□□□□□ -0.65
VARS2-206ENST00000473916 RYR2Q92736 4967 aa10.99□□□□□ -0.65
VARS2-206ENST00000473916 Q6ZSA8 131 aa10.98□□□□□ -0.65
VARS2-206ENST00000473916 Q6ZVQ6 151 aa10.98□□□□□ -0.65
VARS2-206ENST00000473916 UBL5Q9BZL1 73 aa10.98□□□□□ -0.65
VARS2-206ENST00000473916 Q6Q795 121 aa10.96□□□□□ -0.65
VARS2-206ENST00000473916 LRP1BQ9NZR2 4599 aa10.96□□□□□ -0.65
VARS2-206ENST00000473916 F8WEM9 126 aa10.96□□□□□ -0.66
VARS2-206ENST00000473916 SPRR1BP22528 89 aa10.96□□□□□ -0.66
VARS2-206ENST00000473916 IGFL1Q6UW32 110 aa10.94□□□□□ -0.66
VARS2-206ENST00000473916 Q8NBF4 154 aa10.92□□□□□ -0.66
VARS2-206ENST00000473916 A0A087WVE0 104 aa10.91□□□□□ -0.66
VARS2-206ENST00000473916 ZNF861PO60384 105 aa10.91□□□□□ -0.66
VARS2-206ENST00000473916 SPRR4Q96PI1 79 aa10.91□□□□□ -0.66
VARS2-206ENST00000473916 IMUPQ9GZP8 106 aa10.91□□□□□ -0.66
VARS2-206ENST00000473916 IGLV8-61A0A075B6I0 122 aa10.9□□□□□ -0.66
VARS2-206ENST00000473916 ANAPC11Q9NYG5 84 aa10.9□□□□□ -0.66
VARS2-206ENST00000473916 IGLV7-43P04211 117 aa10.89□□□□□ -0.67
VARS2-206ENST00000473916 FAM236AA0A1B0GUQ0 79 aa10.87□□□□□ -0.67
VARS2-206ENST00000473916 FAM236BA0A1B0GV22 79 aa10.87□□□□□ -0.67
VARS2-206ENST00000473916 ATP5EP2Q5VTU8 51 aa10.87□□□□□ -0.67
VARS2-206ENST00000473916 HIST1H4AP62805 103 aaKnown RBP10.86□□□□□ -0.67
VARS2-206ENST00000473916 IGLV9-49A0A0B4J1Y8 123 aa10.85□□□□□ -0.67
VARS2-206ENST00000473916 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
VARS2-206ENST00000473916 LINC00483Q53H64 154 aa10.85□□□□□ -0.67
VARS2-206ENST00000473916 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
VARS2-206ENST00000473916 CRYGAP11844 174 aa10.84□□□□□ -0.67
VARS2-206ENST00000473916 A0A1B0GVY2 172 aa10.84□□□□□ -0.67
VARS2-206ENST00000473916 NREPQ16612 68 aa10.84□□□□□ -0.67
VARS2-206ENST00000473916 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
VARS2-206ENST00000473916 C9orf153Q5TBE3 101 aa10.8□□□□□ -0.68
VARS2-206ENST00000473916 ANAPC13Q9BS18 74 aa10.8□□□□□ -0.68
VARS2-206ENST00000473916 ZNF706Q9Y5V0 76 aaPredicted RBP10.8□□□□□ -0.68
VARS2-206ENST00000473916 Q8N9L7 120 aa10.8□□□□□ -0.68
VARS2-206ENST00000473916 CXCL6P80162 114 aa10.79□□□□□ -0.68
VARS2-206ENST00000473916 A0A087WSZ3 146 aa10.79□□□□□ -0.68
VARS2-206ENST00000473916 A0A1B0GW54 56 aa10.77□□□□□ -0.68
VARS2-206ENST00000473916 MOBPQ13875 183 aa10.76□□□□□ -0.69
VARS2-206ENST00000473916 SS18L2Q9UHA2 77 aa10.76□□□□□ -0.69
VARS2-206ENST00000473916 BPY2O14599 106 aa10.75□□□□□ -0.69
VARS2-206ENST00000473916 RYR3Q15413 4870 aa10.74□□□□□ -0.69
VARS2-206ENST00000473916 DEFB116Q30KQ4 102 aa10.73□□□□□ -0.69
VARS2-206ENST00000473916 APOBP04114 4563 aaKnown RBP10.72□□□□□ -0.69
VARS2-206ENST00000473916 HRCT1Q6UXD1 115 aa10.72□□□□□ -0.69
VARS2-206ENST00000473916 IGKV4-1P06312 121 aa10.7□□□□□ -0.7
VARS2-206ENST00000473916 SMR3BP02814 79 aaPredicted RBP10.68□□□□□ -0.7
VARS2-206ENST00000473916 DSCR10P59022 87 aa10.68□□□□□ -0.7
VARS2-206ENST00000473916 A0A087X002 238 aa10.66□□□□□ -0.7
VARS2-206ENST00000473916 CCDC179H3BU77 68 aa10.65□□□□□ -0.71
VARS2-206ENST00000473916 FAT1Q14517 4588 aa10.64□□□□□ -0.71
VARS2-206ENST00000473916 K7EQZ3 153 aa10.63□□□□□ -0.71
VARS2-206ENST00000473916 ATOX1O00244 68 aa10.63□□□□□ -0.71
VARS2-206ENST00000473916 RPL37AP61513 92 aaKnown RBP10.63□□□□□ -0.71
VARS2-206ENST00000473916 KRTAP1-4P0C5Y4 121 aa10.62□□□□□ -0.71
VARS2-206ENST00000473916 KRTAP13-2Q52LG2 175 aa10.62□□□□□ -0.71
VARS2-206ENST00000473916 SMIM20Q8N5G0 67 aa10.61□□□□□ -0.71
VARS2-206ENST00000473916 LINC00472Q9H8W2 130 aa10.61□□□□□ -0.71
VARS2-206ENST00000473916 Q96NJ1 140 aa10.57□□□□□ -0.72
VARS2-206ENST00000473916 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
VARS2-206ENST00000473916 COX7CP15954 63 aa10.53□□□□□ -0.72
VARS2-206ENST00000473916 SERP2Q8N6R1 65 aa10.53□□□□□ -0.72
VARS2-206ENST00000473916 FAM229BQ4G0N7 80 aa10.52□□□□□ -0.73
VARS2-206ENST00000473916 SSBP3-AS1Q7Z2R9 100 aa10.51□□□□□ -0.73
VARS2-206ENST00000473916 PLA2G1BP04054 148 aaKnown RBP10.5□□□□□ -0.73
VARS2-206ENST00000473916 C5orf47Q569G3 176 aa10.5□□□□□ -0.73
VARS2-206ENST00000473916 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
VARS2-206ENST00000473916 UQCRQO14949 82 aa10.49□□□□□ -0.73
VARS2-206ENST00000473916 A8MWP4 228 aa10.48□□□□□ -0.73
VARS2-206ENST00000473916 PRR15Q8IV56 129 aa10.46□□□□□ -0.73
VARS2-206ENST00000473916 HCG22E2RYF7 251 aa10.46□□□□□ -0.74
VARS2-206ENST00000473916 WFDC13Q8IUB5 93 aa10.46□□□□□ -0.74
VARS2-206ENST00000473916 CYSTM1Q9H1C7 97 aa10.45□□□□□ -0.74
VARS2-206ENST00000473916 CD164Q04900 197 aa10.45□□□□□ -0.74
VARS2-206ENST00000473916 HSPG2P98160 4391 aa10.44□□□□□ -0.74
VARS2-206ENST00000473916 TRAV7A0A075B6U4 112 aa10.44□□□□□ -0.74
VARS2-206ENST00000473916 J3KT08 172 aa10.43□□□□□ -0.74
VARS2-206ENST00000473916 PRR26Q8N8Z3 221 aa10.43□□□□□ -0.74
VARS2-206ENST00000473916 OCR1Q9BZK8 76 aa10.42□□□□□ -0.74
VARS2-206ENST00000473916 TYMSOSQ8TAI1 123 aa10.41□□□□□ -0.74
VARS2-206ENST00000473916 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
VARS2-206ENST00000473916 MMP24-AS1A0A0U1RRL7 71 aa10.38□□□□□ -0.75
VARS2-206ENST00000473916 C20orf197Q8N268 126 aa10.37□□□□□ -0.75
VARS2-206ENST00000473916 EPPK1P58107 5090 aaKnown RBP10.36□□□□□ -0.75
VARS2-206ENST00000473916 RYR1P21817 5038 aa10.36□□□□□ -0.75
VARS2-206ENST00000473916 IGHV6-1A0A0B4J1U7 121 aa10.36□□□□□ -0.75
VARS2-206ENST00000473916 NDUFB1O75438 58 aa10.36□□□□□ -0.75
VARS2-206ENST00000473916 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
VARS2-206ENST00000473916 NOTCH2NLQ7Z3S9 236 aa10.36□□□□□ -0.75
VARS2-206ENST00000473916 KRTAP17-1Q9BYP8 105 aa10.35□□□□□ -0.75
VARS2-206ENST00000473916 PKHD1L1Q86WI1 4243 aa10.34□□□□□ -0.75
VARS2-206ENST00000473916 A0A1B0GVX0 72 aa10.34□□□□□ -0.75
VARS2-206ENST00000473916 KIAA1109Q2LD37 5005 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms