RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 SYNE1Q8NF91 8797 aaKnown RBP1.17□□□□□ -2.22
CNOT4-209ENST00000473470 LOC100130705A0A1B0GUX0 176 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 M0QY20 66 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 PDCD5O14737 125 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 SSSCA1O60232 199 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 CRIP1P50238 77 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 TMBIM6P55061 237 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 UBE2L3P68036 154 aaKnown RBP1.17□□□□□ -2.22
CNOT4-209ENST00000473470 RPL39LQ96EH5 51 aaKnown RBP1.17□□□□□ -2.22
CNOT4-209ENST00000473470 Q96NJ1 140 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 TMEM14CQ9P0S9 112 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 TOMM7Q9P0U1 55 aa1.17□□□□□ -2.22
CNOT4-209ENST00000473470 UBE2L5PA0A1B0GUS4 154 aa1.16□□□□□ -2.22
CNOT4-209ENST00000473470 SSBP3-AS1Q7Z2R9 100 aa1.16□□□□□ -2.22
CNOT4-209ENST00000473470 LAMTOR3Q9UHA4 124 aa1.16□□□□□ -2.22
CNOT4-209ENST00000473470 LSM2Q9Y333 95 aaKnown RBP1.16□□□□□ -2.22
CNOT4-209ENST00000473470 LENEPQ9Y5L5 61 aa1.16□□□□□ -2.22
CNOT4-209ENST00000473470 TSTD3H0UI37 97 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 TAX1BP3O14907 124 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 CD3DP04234 171 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 NCS1P62166 190 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 Q6ZUT4 128 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 AKAP14Q86UN6 197 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 SMIM20Q8N5G0 67 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 SLC25A21Q9BQT8 299 aaPredicted RBP1.15□□□□□ -2.23
CNOT4-209ENST00000473470 LIMD2Q9BT23 127 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 CDC42SE2Q9NRR3 84 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 TMEM242Q9NWH2 141 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 SS18L2Q9UHA2 77 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 AP4S1Q9Y587 144 aa1.15□□□□□ -2.23
CNOT4-209ENST00000473470 INE1O15225 51 aa1.14□□□□□ -2.23
CNOT4-209ENST00000473470 SPANXN1Q5VSR9 72 aa1.14□□□□□ -2.23
CNOT4-209ENST00000473470 PFDN5Q99471 154 aa1.14□□□□□ -2.23
CNOT4-209ENST00000473470 TRBV30A0A0K0K1B3 111 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 TIMM17BO60830 172 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 SOSTDC1Q6X4U4 206 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 KRTAP19-3Q7Z4W3 81 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 PYDC1Q8WXC3 89 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 MAP1LC3BQ9GZQ8 125 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 OTORQ9NRC9 128 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 SPANXA1Q9NS26 97 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 ZFP30Q9Y2G7 519 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 ARL2-SNX15V9GYD0 113 aa1.13□□□□□ -2.23
CNOT4-209ENST00000473470 TRAV1-2A0A0B4J238 106 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 H0YAA0 97 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 SLC25A6P12236 298 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 SDC2P34741 201 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 TMEM14EPQ6UXP3 125 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 SPRR2GQ9BYE4 73 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 NIT2Q9NQR4 276 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 LAMTOR2Q9Y2Q5 125 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 HSPB11Q9Y547 144 aa1.12□□□□□ -2.23
CNOT4-209ENST00000473470 TMEM256-PLSCR3K7ERE1 68 aa1.11□□□□□ -2.23
CNOT4-209ENST00000473470 TRGC2P03986 189 aa1.11□□□□□ -2.23
CNOT4-209ENST00000473470 ROMO1P60602 79 aa1.11□□□□□ -2.23
CNOT4-209ENST00000473470 TEX261Q6UWH6 196 aa1.11□□□□□ -2.23
CNOT4-209ENST00000473470 SPANXCQ9NY87 97 aa1.11□□□□□ -2.23
CNOT4-209ENST00000473470 CCDC160A6NGH7 325 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 HIST1H2BKO60814 126 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 HIST1H2BJP06899 126 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 ZNF25P17030 456 aaPredicted RBP1.1□□□□□ -2.23
CNOT4-209ENST00000473470 NDUFA6P56556 154 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 CKS1BP61024 79 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 TMEM254Q8TBM7 123 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 AP1S3Q96PC3 154 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 NPCDR1Q9BY65 106 aa1.1□□□□□ -2.23
CNOT4-209ENST00000473470 C17orf112F2Z3M2 114 aa1.09□□□□□ -2.23
CNOT4-209ENST00000473470 S100A16Q96FQ6 103 aaKnown RBP1.09□□□□□ -2.23
CNOT4-209ENST00000473470 CDC42SE1Q9NRR8 79 aa1.09□□□□□ -2.23
CNOT4-209ENST00000473470 GSKIPQ9P0R6 139 aa1.09□□□□□ -2.23
CNOT4-209ENST00000473470 TRDV1A0A1B0GX56 115 aa1.08□□□□□ -2.24
CNOT4-209ENST00000473470 RPL35P42766 123 aaKnown RBP1.08□□□□□ -2.24
CNOT4-209ENST00000473470 RPL39P62891 51 aaKnown RBP1.08□□□□□ -2.24
CNOT4-209ENST00000473470 TMEM128Q5BJH2 165 aa1.08□□□□□ -2.24
CNOT4-209ENST00000473470 FAM74A1Q5RGS3 127 aa1.08□□□□□ -2.24
CNOT4-209ENST00000473470 BATF3Q9NR55 127 aa1.08□□□□□ -2.24
CNOT4-209ENST00000473470 SCP2D1Q9UJQ7 156 aa1.08□□□□□ -2.24
CNOT4-209ENST00000473470 ETDCA0A1B0GVM5 59 aa1.07□□□□□ -2.24
CNOT4-209ENST00000473470 A0A1W2PRE2 83 aa1.07□□□□□ -2.24
CNOT4-209ENST00000473470 NCR3O14931 201 aa1.07□□□□□ -2.24
CNOT4-209ENST00000473470 LYRM1O43325 122 aa1.07□□□□□ -2.24
CNOT4-209ENST00000473470 SCGB1A1P11684 91 aa1.07□□□□□ -2.24
CNOT4-209ENST00000473470 PRR15Q8IV56 129 aa1.07□□□□□ -2.24
CNOT4-209ENST00000473470 C7orf77A4D0Y5 90 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 I3L3M4 83 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 J3KT08 172 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 MT1EP04732 61 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 LSM3P62310 102 aaKnown RBP1.06□□□□□ -2.24
CNOT4-209ENST00000473470 HBBP68871 147 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 WFDC13Q8IUB5 93 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 MT1MQ8N339 61 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 C5orf17Q8NAS9 161 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 CACFD1Q9UGQ2 172 aa1.06□□□□□ -2.24
CNOT4-209ENST00000473470 A0A087WSZ3 146 aa1.05□□□□□ -2.24
CNOT4-209ENST00000473470 NCR2O95944 276 aa1.05□□□□□ -2.24
CNOT4-209ENST00000473470 CXCL1P09341 107 aa1.05□□□□□ -2.24
CNOT4-209ENST00000473470 FABP2P12104 132 aa1.05□□□□□ -2.24
CNOT4-209ENST00000473470 S100A11P31949 105 aa1.05□□□□□ -2.24
CNOT4-209ENST00000473470 KRTAP19-7Q3SYF9 63 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms