RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 KRTAP9-8Q9BYQ0 159 aa5.78□□□□□ -1.48
ACTB-209ENST00000473257 IGFL1Q6UW32 110 aa5.77□□□□□ -1.49
ACTB-209ENST00000473257 TRBV7-7A0A0K0K1E9 115 aa5.76□□□□□ -1.49
ACTB-209ENST00000473257 F8WEM9 126 aa5.76□□□□□ -1.49
ACTB-209ENST00000473257 IFITM1P13164 125 aa5.76□□□□□ -1.49
ACTB-209ENST00000473257 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
ACTB-209ENST00000473257 Q6ZQY7 126 aa5.76□□□□□ -1.49
ACTB-209ENST00000473257 Q75L30 129 aa5.75□□□□□ -1.49
ACTB-209ENST00000473257 A4D1N5 150 aa5.74□□□□□ -1.49
ACTB-209ENST00000473257 LINC00575Q6W349 94 aa5.74□□□□□ -1.49
ACTB-209ENST00000473257 Q96NJ1 140 aa5.74□□□□□ -1.49
ACTB-209ENST00000473257 NHP2Q9NX24 153 aaKnown RBP5.74□□□□□ -1.49
ACTB-209ENST00000473257 TRAV13-2A0A0B4J235 113 aa5.73□□□□□ -1.49
ACTB-209ENST00000473257 H3BUT2 72 aa5.73□□□□□ -1.49
ACTB-209ENST00000473257 CLEC2BQ92478 149 aa5.73□□□□□ -1.49
ACTB-209ENST00000473257 OCIAD2Q56VL3 154 aa5.72□□□□□ -1.49
ACTB-209ENST00000473257 COPS9Q8WXC6 57 aa5.72□□□□□ -1.49
ACTB-209ENST00000473257 hADV29S1A0JD25 119 aa5.71□□□□□ -1.5
ACTB-209ENST00000473257 Q6JHZ5 121 aa5.7□□□□□ -1.5
ACTB-209ENST00000473257 Q6ZVH6 145 aa5.7□□□□□ -1.5
ACTB-209ENST00000473257 C12orf57Q99622 126 aa5.7□□□□□ -1.5
ACTB-209ENST00000473257 C20orf202A1L168 122 aa5.69□□□□□ -1.5
ACTB-209ENST00000473257 MT2AP02795 61 aa5.69□□□□□ -1.5
ACTB-209ENST00000473257 VAMP3Q15836 100 aa5.69□□□□□ -1.5
ACTB-209ENST00000473257 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
ACTB-209ENST00000473257 LST1O00453 97 aa5.68□□□□□ -1.5
ACTB-209ENST00000473257 CFC1P0CG37 223 aa5.67□□□□□ -1.5
ACTB-209ENST00000473257 COA6Q5JTJ3 125 aaKnown RBP5.67□□□□□ -1.5
ACTB-209ENST00000473257 LCE2BO14633 110 aa5.66□□□□□ -1.5
ACTB-209ENST00000473257 MT1FP04733 61 aa5.66□□□□□ -1.5
ACTB-209ENST00000473257 DSCR10P59022 87 aa5.66□□□□□ -1.5
ACTB-209ENST00000473257 A8MUU9 505 aa5.65□□□□□ -1.5
ACTB-209ENST00000473257 KRTAP16-1A8MUX0 517 aa5.65□□□□□ -1.5
ACTB-209ENST00000473257 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
ACTB-209ENST00000473257 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.5
ACTB-209ENST00000473257 SNHG12Q9BXW3 62 aa5.65□□□□□ -1.5
ACTB-209ENST00000473257 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.64□□□□□ -1.51
ACTB-209ENST00000473257 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
ACTB-209ENST00000473257 TRBV20-1A0A075B6N2 111 aa5.61□□□□□ -1.51
ACTB-209ENST00000473257 A0A087WSZ3 146 aa5.61□□□□□ -1.51
ACTB-209ENST00000473257 FAM236DA0A1B0GTK5 79 aa5.6□□□□□ -1.51
ACTB-209ENST00000473257 FAM236CP0DP71 79 aa5.6□□□□□ -1.51
ACTB-209ENST00000473257 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
ACTB-209ENST00000473257 KRTAP10-10P60014 251 aa5.59□□□□□ -1.51
ACTB-209ENST00000473257 FAM218AQ96MZ4 157 aa5.59□□□□□ -1.51
ACTB-209ENST00000473257 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
ACTB-209ENST00000473257 NDUFV3P56181 108 aaKnown RBP5.57□□□□□ -1.52
ACTB-209ENST00000473257 PPDPFLQ8WWR9 84 aa5.57□□□□□ -1.52
ACTB-209ENST00000473257 HIST1H4GQ99525 98 aa5.57□□□□□ -1.52
ACTB-209ENST00000473257 SIGMAR1Q99720 223 aa5.57□□□□□ -1.52
ACTB-209ENST00000473257 SS18L2Q9UHA2 77 aa5.57□□□□□ -1.52
ACTB-209ENST00000473257 A0A1B0GV72 72 aa5.56□□□□□ -1.52
ACTB-209ENST00000473257 HRES1P13985 223 aa5.56□□□□□ -1.52
ACTB-209ENST00000473257 SNRPEP62304 92 aaKnown RBP5.56□□□□□ -1.52
ACTB-209ENST00000473257 BVES-AS1Q5T3Y7 98 aa5.56□□□□□ -1.52
ACTB-209ENST00000473257 TEN1Q86WV5 123 aa5.56□□□□□ -1.52
ACTB-209ENST00000473257 HIST1H2BLQ99880 126 aa5.56□□□□□ -1.52
ACTB-209ENST00000473257 HIST3H2BBQ8N257 126 aa5.55□□□□□ -1.52
ACTB-209ENST00000473257 A0A1W2PNM2 257 aa5.54□□□□□ -1.52
ACTB-209ENST00000473257 HSBP1L1C9JCN9 74 aa5.54□□□□□ -1.52
ACTB-209ENST00000473257 SCGB1D1O95968 90 aa5.54□□□□□ -1.52
ACTB-209ENST00000473257 DEFB116Q30KQ4 102 aa5.54□□□□□ -1.52
ACTB-209ENST00000473257 MPLKIPQ8TAP9 179 aa5.54□□□□□ -1.52
ACTB-209ENST00000473257 H3BMG7 143 aa5.53□□□□□ -1.52
ACTB-209ENST00000473257 FABP2P12104 132 aa5.52□□□□□ -1.53
ACTB-209ENST00000473257 LINC00313P59037 77 aa5.52□□□□□ -1.53
ACTB-209ENST00000473257 IGKV4-1P06312 121 aa5.51□□□□□ -1.53
ACTB-209ENST00000473257 S100A2P29034 98 aa5.5□□□□□ -1.53
ACTB-209ENST00000473257 RAB37Q96AX2 223 aa5.5□□□□□ -1.53
ACTB-209ENST00000473257 RBM12B-AS1Q9P1G2 102 aa5.49□□□□□ -1.53
ACTB-209ENST00000473257 COX8AP10176 69 aa5.48□□□□□ -1.53
ACTB-209ENST00000473257 C14orf144Q96I85 54 aa5.48□□□□□ -1.53
ACTB-209ENST00000473257 IGHV6-1A0A0B4J1U7 121 aa5.47□□□□□ -1.53
ACTB-209ENST00000473257 H0YGX0 51 aa5.47□□□□□ -1.53
ACTB-209ENST00000473257 A0A0B4J2C4 111 aa5.44□□□□□ -1.54
ACTB-209ENST00000473257 SNCGO76070 127 aa5.44□□□□□ -1.54
ACTB-209ENST00000473257 C2orf91Q6ZV80 131 aa5.44□□□□□ -1.54
ACTB-209ENST00000473257 ANKRD29Q8N6D5 301 aa5.44□□□□□ -1.54
ACTB-209ENST00000473257 LINC00472Q9H8W2 130 aa5.44□□□□□ -1.54
ACTB-209ENST00000473257 LOC105371267A0A1B0GV96 52 aa5.43□□□□□ -1.54
ACTB-209ENST00000473257 TRIAP1O43715 76 aa5.43□□□□□ -1.54
ACTB-209ENST00000473257 TMA7Q9Y2S6 64 aaKnown RBP5.43□□□□□ -1.54
ACTB-209ENST00000473257 DLEU1O43261 78 aa5.42□□□□□ -1.54
ACTB-209ENST00000473257 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
ACTB-209ENST00000473257 PAM16Q9Y3D7 125 aa5.42□□□□□ -1.54
ACTB-209ENST00000473257 TRBV7-4A0A0J9YYF1 115 aa5.41□□□□□ -1.54
ACTB-209ENST00000473257 FXYD2P54710 66 aa5.4□□□□□ -1.54
ACTB-209ENST00000473257 PRO1854Q9UHT4 67 aa5.4□□□□□ -1.54
ACTB-209ENST00000473257 CCKP06307 115 aa5.39□□□□□ -1.55
ACTB-209ENST00000473257 S100A6P06703 90 aa5.39□□□□□ -1.55
ACTB-209ENST00000473257 SPINK7P58062 85 aa5.39□□□□□ -1.55
ACTB-209ENST00000473257 SPATA45Q537H7 98 aa5.39□□□□□ -1.55
ACTB-209ENST00000473257 HIGD1BQ9P298 99 aa5.39□□□□□ -1.55
ACTB-209ENST00000473257 A0A1B0GX51 115 aa5.38□□□□□ -1.55
ACTB-209ENST00000473257 K7ERJ3 54 aa5.38□□□□□ -1.55
ACTB-209ENST00000473257 TRACP01848 142 aa5.38□□□□□ -1.55
ACTB-209ENST00000473257 CEND1Q8N111 149 aa5.38□□□□□ -1.55
ACTB-209ENST00000473257 Q8N9P0 234 aaPredicted RBP5.38□□□□□ -1.55
ACTB-209ENST00000473257 ZCCHC13Q8WW36 166 aaKnown RBP5.38□□□□□ -1.55
ACTB-209ENST00000473257 VPS25Q9BRG1 176 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms