RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 C9orf92A6NGG3 77 aa8.31□□□□□ -1.08
VTI1A-203ENST00000472892 KRTAP4-7Q9BYR0 210 aa8.31□□□□□ -1.08
VTI1A-203ENST00000472892 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
VTI1A-203ENST00000472892 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
VTI1A-203ENST00000472892 PCOTHQ58A44 107 aa8.3□□□□□ -1.08
VTI1A-203ENST00000472892 SMIM11BQ8TCY0 68 aa8.29□□□□□ -1.08
VTI1A-203ENST00000472892 A0A0G2JQZ4 141 aa8.28□□□□□ -1.08
VTI1A-203ENST00000472892 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
VTI1A-203ENST00000472892 C1orf195Q5TG92 126 aa8.28□□□□□ -1.08
VTI1A-203ENST00000472892 NHP2Q9NX24 153 aaKnown RBP8.28□□□□□ -1.08
VTI1A-203ENST00000472892 IGLV8-61A0A075B6I0 122 aa8.26□□□□□ -1.09
VTI1A-203ENST00000472892 KRTAP19-4Q3LI73 84 aa8.25□□□□□ -1.09
VTI1A-203ENST00000472892 VAMP3Q15836 100 aa8.23□□□□□ -1.09
VTI1A-203ENST00000472892 LINC00575Q6W349 94 aa8.22□□□□□ -1.09
VTI1A-203ENST00000472892 HIST3H2BBQ8N257 126 aa8.22□□□□□ -1.09
VTI1A-203ENST00000472892 HIST1H2BLQ99880 126 aa8.21□□□□□ -1.1
VTI1A-203ENST00000472892 TCL1BO95988 128 aa8.2□□□□□ -1.1
VTI1A-203ENST00000472892 LCE4AQ5TA78 99 aa8.2□□□□□ -1.1
VTI1A-203ENST00000472892 HSBP1L1C9JCN9 74 aa8.19□□□□□ -1.1
VTI1A-203ENST00000472892 MT1HP80294 61 aa8.19□□□□□ -1.1
VTI1A-203ENST00000472892 hADV29S1A0JD25 119 aa8.18□□□□□ -1.1
VTI1A-203ENST00000472892 F8WEM9 126 aa8.18□□□□□ -1.1
VTI1A-203ENST00000472892 S100A2P29034 98 aa8.18□□□□□ -1.1
VTI1A-203ENST00000472892 RPL37P61927 97 aaKnown RBP8.18□□□□□ -1.1
VTI1A-203ENST00000472892 Q6ZQY7 126 aa8.17□□□□□ -1.1
VTI1A-203ENST00000472892 Q6JHZ5 121 aa8.16□□□□□ -1.1
VTI1A-203ENST00000472892 KRTAP4-9Q9BYQ8 210 aa8.15□□□□□ -1.1
VTI1A-203ENST00000472892 OCIAD2Q56VL3 154 aa8.14□□□□□ -1.11
VTI1A-203ENST00000472892 IGFL1Q6UW32 110 aa8.13□□□□□ -1.11
VTI1A-203ENST00000472892 TRBV7-7A0A0K0K1E9 115 aa8.12□□□□□ -1.11
VTI1A-203ENST00000472892 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.12□□□□□ -1.11
VTI1A-203ENST00000472892 CLEC2BQ92478 149 aa8.12□□□□□ -1.11
VTI1A-203ENST00000472892 CFC1BP0CG36 223 aa8.11□□□□□ -1.11
VTI1A-203ENST00000472892 PPDPFLQ8WWR9 84 aa8.11□□□□□ -1.11
VTI1A-203ENST00000472892 FSIP2Q5CZC0 6907 aa8.11□□□□□ -1.11
VTI1A-203ENST00000472892 S100A6P06703 90 aa8.1□□□□□ -1.11
VTI1A-203ENST00000472892 BVES-AS1Q5T3Y7 98 aa8.1□□□□□ -1.11
VTI1A-203ENST00000472892 HIST1H4GQ99525 98 aa8.1□□□□□ -1.11
VTI1A-203ENST00000472892 C12orf57Q99622 126 aa8.09□□□□□ -1.11
VTI1A-203ENST00000472892 SCGB1D1O95968 90 aa8.08□□□□□ -1.12
VTI1A-203ENST00000472892 COX8AP10176 69 aa8.08□□□□□ -1.12
VTI1A-203ENST00000472892 SNHG12Q9BXW3 62 aa8.07□□□□□ -1.12
VTI1A-203ENST00000472892 DLEU1O43261 78 aa8.06□□□□□ -1.12
VTI1A-203ENST00000472892 S100A1P23297 94 aa8.06□□□□□ -1.12
VTI1A-203ENST00000472892 CRCT1Q9UGL9 99 aa8.06□□□□□ -1.12
VTI1A-203ENST00000472892 KRTAP10-6P60371 365 aaPredicted RBP8.05□□□□□ -1.12
VTI1A-203ENST00000472892 H3BUT2 72 aa8.03□□□□□ -1.12
VTI1A-203ENST00000472892 CFC1P0CG37 223 aa8.03□□□□□ -1.12
VTI1A-203ENST00000472892 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
VTI1A-203ENST00000472892 COX6B2Q6YFQ2 88 aa8.02□□□□□ -1.13
VTI1A-203ENST00000472892 Q75L30 129 aa8.02□□□□□ -1.13
VTI1A-203ENST00000472892 OBSCN-AS1Q96MR7 158 aa8.02□□□□□ -1.13
VTI1A-203ENST00000472892 LST1O00453 97 aa8.01□□□□□ -1.13
VTI1A-203ENST00000472892 H0YGX0 51 aa8□□□□□ -1.13
VTI1A-203ENST00000472892 M0R2T5 61 aa8□□□□□ -1.13
VTI1A-203ENST00000472892 Q6Q795 121 aa8□□□□□ -1.13
VTI1A-203ENST00000472892 ATP11AUNQ6ZP68 121 aa8□□□□□ -1.13
VTI1A-203ENST00000472892 C14orf144Q96I85 54 aa8□□□□□ -1.13
VTI1A-203ENST00000472892 HIGD1BQ9P298 99 aa8□□□□□ -1.13
VTI1A-203ENST00000472892 FLGP20930 4061 aaPredicted RBP8□□□□□ -1.13
VTI1A-203ENST00000472892 SNCGO76070 127 aa7.99□□□□□ -1.13
VTI1A-203ENST00000472892 RAB37Q96AX2 223 aa7.99□□□□□ -1.13
VTI1A-203ENST00000472892 A0A0B4J2C4 111 aa7.98□□□□□ -1.13
VTI1A-203ENST00000472892 FAM218AQ96MZ4 157 aa7.98□□□□□ -1.13
VTI1A-203ENST00000472892 NDUFV3P56181 108 aaKnown RBP7.97□□□□□ -1.13
VTI1A-203ENST00000472892 SS18L2Q9UHA2 77 aa7.97□□□□□ -1.13
VTI1A-203ENST00000472892 TEN1Q86WV5 123 aa7.96□□□□□ -1.14
VTI1A-203ENST00000472892 SPATA45Q537H7 98 aa7.95□□□□□ -1.14
VTI1A-203ENST00000472892 C2orf91Q6ZV80 131 aa7.95□□□□□ -1.14
VTI1A-203ENST00000472892 Q96NJ1 140 aa7.95□□□□□ -1.14
VTI1A-203ENST00000472892 KRTAP4-2Q9BYR5 136 aa7.95□□□□□ -1.14
VTI1A-203ENST00000472892 PAM16Q9Y3D7 125 aa7.95□□□□□ -1.14
VTI1A-203ENST00000472892 A0A1B0GX51 115 aa7.92□□□□□ -1.14
VTI1A-203ENST00000472892 CEND1Q8N111 149 aa7.92□□□□□ -1.14
VTI1A-203ENST00000472892 C20orf166-AS1Q96NR2 134 aa7.92□□□□□ -1.14
VTI1A-203ENST00000472892 A0A087WSZ3 146 aa7.91□□□□□ -1.14
VTI1A-203ENST00000472892 H3BMG7 143 aa7.91□□□□□ -1.14
VTI1A-203ENST00000472892 PRO1854Q9UHT4 67 aa7.91□□□□□ -1.14
VTI1A-203ENST00000472892 VAMP8Q9BV40 100 aa7.9□□□□□ -1.14
VTI1A-203ENST00000472892 A8MUU9 505 aa7.89□□□□□ -1.15
VTI1A-203ENST00000472892 FABP2P12104 132 aa7.88□□□□□ -1.15
VTI1A-203ENST00000472892 C9orf118A6NHY6 69 aa7.87□□□□□ -1.15
VTI1A-203ENST00000472892 A0A1W2PNM2 257 aa7.86□□□□□ -1.15
VTI1A-203ENST00000472892 FXYD2P54710 66 aa7.86□□□□□ -1.15
VTI1A-203ENST00000472892 KRTAP4-11Q9BYQ6 195 aa7.86□□□□□ -1.15
VTI1A-203ENST00000472892 TRIAP1O43715 76 aa7.85□□□□□ -1.15
VTI1A-203ENST00000472892 DSCR10P59022 87 aa7.82□□□□□ -1.16
VTI1A-203ENST00000472892 ANKRD29Q8N6D5 301 aa7.81□□□□□ -1.16
VTI1A-203ENST00000472892 TRBV7-4A0A0J9YYF1 115 aa7.8□□□□□ -1.16
VTI1A-203ENST00000472892 H3BQ85 93 aa7.8□□□□□ -1.16
VTI1A-203ENST00000472892 LCE5AQ5TCM9 118 aa7.8□□□□□ -1.16
VTI1A-203ENST00000472892 ORMDL1Q9P0S3 153 aa7.8□□□□□ -1.16
VTI1A-203ENST00000472892 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
VTI1A-203ENST00000472892 DNAL4O96015 105 aa7.78□□□□□ -1.16
VTI1A-203ENST00000472892 LINC00313P59037 77 aa7.78□□□□□ -1.16
VTI1A-203ENST00000472892 SIGMAR1Q99720 223 aa7.78□□□□□ -1.16
VTI1A-203ENST00000472892 KRTAP16-1A8MUX0 517 aa7.77□□□□□ -1.17
VTI1A-203ENST00000472892 TMEM256-PLSCR3K7ERE1 68 aa7.77□□□□□ -1.17
VTI1A-203ENST00000472892 IGKV4-1P06312 121 aa7.77□□□□□ -1.17
VTI1A-203ENST00000472892 HSD52Q0P140 79 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms