RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 SRRM2Q9UQ35 2752 aaKnown RBP13.43□□□□□ -0.26
PAXBP1-208ENST00000472588 LINC00483Q53H64 154 aa13.41□□□□□ -0.26
PAXBP1-208ENST00000472588 F8W1H4 67 aa13.4□□□□□ -0.26
PAXBP1-208ENST00000472588 ANKRD29Q8N6D5 301 aa13.39□□□□□ -0.27
PAXBP1-208ENST00000472588 LAMTOR3Q9UHA4 124 aa13.39□□□□□ -0.27
PAXBP1-208ENST00000472588 MTURNQ8N3F0 131 aa13.38□□□□□ -0.27
PAXBP1-208ENST00000472588 FAM229BQ4G0N7 80 aa13.36□□□□□ -0.27
PAXBP1-208ENST00000472588 LINC01600Q96MT4 127 aa13.36□□□□□ -0.27
PAXBP1-208ENST00000472588 PRO0461Q9UI25 63 aa13.36□□□□□ -0.27
PAXBP1-208ENST00000472588 NDUFV3P56181 108 aaKnown RBP13.35□□□□□ -0.27
PAXBP1-208ENST00000472588 F8WEM9 126 aa13.34□□□□□ -0.27
PAXBP1-208ENST00000472588 SMIM29Q86T20 159 aa13.33□□□□□ -0.28
PAXBP1-208ENST00000472588 KRTAP1-4P0C5Y4 121 aa13.32□□□□□ -0.28
PAXBP1-208ENST00000472588 JMJD7-PLA2G4BH0Y9G9 81 aa13.3□□□□□ -0.28
PAXBP1-208ENST00000472588 CRYGAP11844 174 aa13.3□□□□□ -0.28
PAXBP1-208ENST00000472588 SMCPP49901 116 aaPredicted RBP13.3□□□□□ -0.28
PAXBP1-208ENST00000472588 C3orf22Q8N5N4 141 aa13.3□□□□□ -0.28
PAXBP1-208ENST00000472588 ANAPC11Q9NYG5 84 aa13.3□□□□□ -0.28
PAXBP1-208ENST00000472588 IGLV9-49A0A0B4J1Y8 123 aa13.26□□□□□ -0.29
PAXBP1-208ENST00000472588 RBM3P98179 157 aaKnown RBP13.25□□□□□ -0.29
PAXBP1-208ENST00000472588 C9orf153Q5TBE3 101 aa13.24□□□□□ -0.29
PAXBP1-208ENST00000472588 IGLV8-61A0A075B6I0 122 aa13.23□□□□□ -0.29
PAXBP1-208ENST00000472588 A0A087X002 238 aa13.22□□□□□ -0.29
PAXBP1-208ENST00000472588 TEN1Q86WV5 123 aa13.22□□□□□ -0.29
PAXBP1-208ENST00000472588 Q8NBF4 154 aa13.22□□□□□ -0.29
PAXBP1-208ENST00000472588 Q6JHZ5 121 aa13.22□□□□□ -0.29
PAXBP1-208ENST00000472588 DSCR8Q96T75 97 aa13.22□□□□□ -0.29
PAXBP1-208ENST00000472588 FLG2Q5D862 2391 aaPredicted RBP13.21□□□□□ -0.29
PAXBP1-208ENST00000472588 SSBP3-AS1Q7Z2R9 100 aa13.21□□□□□ -0.3
PAXBP1-208ENST00000472588 OBSCN-AS1Q96MR7 158 aa13.21□□□□□ -0.3
PAXBP1-208ENST00000472588 MOBPQ13875 183 aa13.2□□□□□ -0.3
PAXBP1-208ENST00000472588 ETDBQ3ZM63 59 aa13.19□□□□□ -0.3
PAXBP1-208ENST00000472588 PKHD1L1Q86WI1 4243 aa13.18□□□□□ -0.3
PAXBP1-208ENST00000472588 A0A1B0GV72 72 aa13.18□□□□□ -0.3
PAXBP1-208ENST00000472588 PDE6GP18545 87 aa13.17□□□□□ -0.3
PAXBP1-208ENST00000472588 KRTAP13-2Q52LG2 175 aa13.17□□□□□ -0.3
PAXBP1-208ENST00000472588 TYMSOSQ8TAI1 123 aa13.17□□□□□ -0.3
PAXBP1-208ENST00000472588 C21orf62-AS1Q17RA5 79 aa13.16□□□□□ -0.3
PAXBP1-208ENST00000472588 PRR26Q8N8Z3 221 aa13.16□□□□□ -0.3
PAXBP1-208ENST00000472588 MYCBP2O75592 4640 aa13.15□□□□□ -0.3
PAXBP1-208ENST00000472588 TRBV7-4A0A0J9YYF1 115 aa13.14□□□□□ -0.31
PAXBP1-208ENST00000472588 C14orf132Q9NPU4 83 aa13.13□□□□□ -0.31
PAXBP1-208ENST00000472588 LOC110117498A0A087WWA1 95 aa13.12□□□□□ -0.31
PAXBP1-208ENST00000472588 IGFL1Q6UW32 110 aa13.12□□□□□ -0.31
PAXBP1-208ENST00000472588 OXTP01178 125 aa13.1□□□□□ -0.31
PAXBP1-208ENST00000472588 Q6ZQT0 140 aa13.07□□□□□ -0.32
PAXBP1-208ENST00000472588 CCKP06307 115 aa13.05□□□□□ -0.32
PAXBP1-208ENST00000472588 CD164Q04900 197 aa13.05□□□□□ -0.32
PAXBP1-208ENST00000472588 C4orf48Q5BLP8 95 aa13.05□□□□□ -0.32
PAXBP1-208ENST00000472588 KRTAP10-8P60410 259 aa13.04□□□□□ -0.32
PAXBP1-208ENST00000472588 Q6Q795 121 aa13.04□□□□□ -0.32
PAXBP1-208ENST00000472588 KRTAP29-1A8MX34 341 aaPredicted RBP13.03□□□□□ -0.32
PAXBP1-208ENST00000472588 SPAG11AQ6PDA7 123 aa13.03□□□□□ -0.32
PAXBP1-208ENST00000472588 VPS25Q9BRG1 176 aa13.03□□□□□ -0.32
PAXBP1-208ENST00000472588 A0A0G2JQZ4 141 aa13.02□□□□□ -0.33
PAXBP1-208ENST00000472588 A0A1B0GW54 56 aa13.02□□□□□ -0.33
PAXBP1-208ENST00000472588 LINC00304Q8N9R0 145 aa13.01□□□□□ -0.33
PAXBP1-208ENST00000472588 A0A1W2PNM2 257 aa13□□□□□ -0.33
PAXBP1-208ENST00000472588 LRP1Q07954 4544 aaKnown RBP13□□□□□ -0.33
PAXBP1-208ENST00000472588 J3QL48 77 aa12.99□□□□□ -0.33
PAXBP1-208ENST00000472588 FAT3Q8TDW7 4589 aa12.99□□□□□ -0.33
PAXBP1-208ENST00000472588 DMBT1Q9UGM3 2413 aaPredicted RBP12.98□□□□□ -0.33
PAXBP1-208ENST00000472588 SPINK1P00995 79 aa12.96□□□□□ -0.33
PAXBP1-208ENST00000472588 HRCT1Q6UXD1 115 aa12.96□□□□□ -0.33
PAXBP1-208ENST00000472588 TRBV7-7A0A0K0K1E9 115 aa12.96□□□□□ -0.34
PAXBP1-208ENST00000472588 J3QR89 54 aa12.96□□□□□ -0.34
PAXBP1-208ENST00000472588 RPS29P62273 56 aaKnown RBP12.92□□□□□ -0.34
PAXBP1-208ENST00000472588 MT1HL1P0DM35 61 aa12.91□□□□□ -0.34
PAXBP1-208ENST00000472588 LIMD2Q9BT23 127 aa12.91□□□□□ -0.34
PAXBP1-208ENST00000472588 SS18L2Q9UHA2 77 aa12.9□□□□□ -0.34
PAXBP1-208ENST00000472588 A0A087WSZ3 146 aa12.89□□□□□ -0.35
PAXBP1-208ENST00000472588 ACYP1P07311 99 aa12.89□□□□□ -0.35
PAXBP1-208ENST00000472588 FAM240AA0A1B0GVK7 77 aa12.88□□□□□ -0.35
PAXBP1-208ENST00000472588 Q5XG85 94 aa12.87□□□□□ -0.35
PAXBP1-208ENST00000472588 HERC1Q15751 4861 aa12.86□□□□□ -0.35
PAXBP1-208ENST00000472588 K7ERU9 68 aa12.84□□□□□ -0.35
PAXBP1-208ENST00000472588 TNXBP22105 4242 aa12.83□□□□□ -0.36
PAXBP1-208ENST00000472588 ASB16-AS1Q495Z4 193 aa12.8□□□□□ -0.36
PAXBP1-208ENST00000472588 NREPQ16612 68 aa12.79□□□□□ -0.36
PAXBP1-208ENST00000472588 UBL5Q9BZL1 73 aa12.79□□□□□ -0.36
PAXBP1-208ENST00000472588 LINC00846Q9NV44 126 aa12.79□□□□□ -0.36
PAXBP1-208ENST00000472588 Q6ZVQ6 151 aa12.72□□□□□ -0.37
PAXBP1-208ENST00000472588 LINC00472Q9H8W2 130 aa12.69□□□□□ -0.38
PAXBP1-208ENST00000472588 J3KT08 172 aa12.67□□□□□ -0.38
PAXBP1-208ENST00000472588 C1orf195Q5TG92 126 aa12.67□□□□□ -0.38
PAXBP1-208ENST00000472588 Q96NJ1 140 aa12.65□□□□□ -0.38
PAXBP1-208ENST00000472588 BPY2O14599 106 aa12.63□□□□□ -0.39
PAXBP1-208ENST00000472588 SIGMAR1Q99720 223 aa12.63□□□□□ -0.39
PAXBP1-208ENST00000472588 IGKV4-1P06312 121 aa12.62□□□□□ -0.39
PAXBP1-208ENST00000472588 DEFB116Q30KQ4 102 aa12.61□□□□□ -0.39
PAXBP1-208ENST00000472588 LINC00643Q86TS7 51 aa12.61□□□□□ -0.39
PAXBP1-208ENST00000472588 RETNLBQ9BQ08 111 aa12.59□□□□□ -0.39
PAXBP1-208ENST00000472588 ATP5EP2Q5VTU8 51 aa12.58□□□□□ -0.4
PAXBP1-208ENST00000472588 FP248Q71RG6 208 aaPredicted RBP12.58□□□□□ -0.4
PAXBP1-208ENST00000472588 CXCL6P80162 114 aa12.57□□□□□ -0.4
PAXBP1-208ENST00000472588 NDUFB1O75438 58 aa12.55□□□□□ -0.4
PAXBP1-208ENST00000472588 CDIP1Q9H305 208 aa12.55□□□□□ -0.4
PAXBP1-208ENST00000472588 A8MWP4 228 aa12.52□□□□□ -0.41
PAXBP1-208ENST00000472588 DSCR10P59022 87 aa12.5□□□□□ -0.41
PAXBP1-208ENST00000472588 HMCN2Q8NDA2 5059 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms