RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 CDC42BPGQ6DT37 1551 aa0.44□□□□□ -2.34
CLTC-204ENST00000472129 ASXL1Q8IXJ9 1541 aa0.43□□□□□ -2.34
CLTC-204ENST00000472129 NBEAL2Q6ZNJ1 2754 aa0.43□□□□□ -2.34
CLTC-204ENST00000472129 EP300Q09472 2414 aaPredicted RBP0.43□□□□□ -2.34
CLTC-204ENST00000472129 DMBT1Q9UGM3 2413 aaPredicted RBP0.43□□□□□ -2.34
CLTC-204ENST00000472129 M0R2T5 61 aa0.43□□□□□ -2.34
CLTC-204ENST00000472129 ABCA13Q86UQ4 5058 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 APC2O95996 2303 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 ITSN1Q15811 1721 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 ETDCA0A1B0GVM5 59 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 HILPDAQ9Y5L2 63 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 PDZD2O15018 2839 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 RNF213Q63HN8 5207 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 WIZO95785 1651 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 HECTD1Q9ULT8 2610 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 MROH1Q8NDA8 1641 aa0.42□□□□□ -2.34
CLTC-204ENST00000472129 C4AP0C0L4 1744 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 C4BP0C0L5 1744 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 PARP4Q9UKK3 1724 aaKnown RBP0.41□□□□□ -2.34
CLTC-204ENST00000472129 MAP1BP46821 2468 aaKnown RBP0.41□□□□□ -2.34
CLTC-204ENST00000472129 LYNX1G3V0Z9 82 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 H0YGG7 62 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 K7EMI3 77 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 SERF2P84101 59 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 SMIM5Q71RC9 77 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 BSNQ9UPA5 3926 aa0.41□□□□□ -2.34
CLTC-204ENST00000472129 DIP2AQ14689 1571 aa0.4□□□□□ -2.34
CLTC-204ENST00000472129 ABCA9Q8IUA7 1624 aa0.4□□□□□ -2.35
CLTC-204ENST00000472129 HRNRQ86YZ3 2850 aaPredicted RBP0.4□□□□□ -2.35
CLTC-204ENST00000472129 PLXNC1O60486 1568 aa0.4□□□□□ -2.35
CLTC-204ENST00000472129 ADAMTS12P58397 1594 aa0.4□□□□□ -2.35
CLTC-204ENST00000472129 DCHS2Q6V1P9 2916 aa0.4□□□□□ -2.35
CLTC-204ENST00000472129 DNMBPQ6XZF7 1577 aa0.4□□□□□ -2.35
CLTC-204ENST00000472129 MYO18BQ8IUG5 2567 aa0.4□□□□□ -2.35
CLTC-204ENST00000472129 EPPK1P58107 5090 aaKnown RBP0.39□□□□□ -2.35
CLTC-204ENST00000472129 CELSR1Q9NYQ6 3014 aa0.39□□□□□ -2.35
CLTC-204ENST00000472129 TJP1Q07157 1748 aa0.39□□□□□ -2.35
CLTC-204ENST00000472129 STAB2Q8WWQ8 2551 aa0.39□□□□□ -2.35
CLTC-204ENST00000472129 DEFB135Q30KP9 77 aa0.39□□□□□ -2.35
CLTC-204ENST00000472129 INO80Q9ULG1 1556 aaPredicted RBP0.39□□□□□ -2.35
CLTC-204ENST00000472129 LELP1Q5T871 98 aa0.38□□□□□ -2.35
CLTC-204ENST00000472129 ITPR3Q14573 2671 aa0.38□□□□□ -2.35
CLTC-204ENST00000472129 DOPEY1Q5JWR5 2465 aa0.38□□□□□ -2.35
CLTC-204ENST00000472129 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
CLTC-204ENST00000472129 LRP1Q07954 4544 aaKnown RBP0.37□□□□□ -2.35
CLTC-204ENST00000472129 ZANQ9Y493 2812 aa0.37□□□□□ -2.35
CLTC-204ENST00000472129 RYR3Q15413 4870 aa0.37□□□□□ -2.35
CLTC-204ENST00000472129 NRAPQ86VF7 1730 aa0.37□□□□□ -2.35
CLTC-204ENST00000472129 RNF17Q9BXT8 1623 aaKnown RBP0.37□□□□□ -2.35
CLTC-204ENST00000472129 CCDC168Q8NDH2 2452 aa0.37□□□□□ -2.35
CLTC-204ENST00000472129 HYDINQ4G0P3 5121 aa0.37□□□□□ -2.35
CLTC-204ENST00000472129 CCDC180Q9P1Z9 1646 aa0.36□□□□□ -2.35
CLTC-204ENST00000472129 HIVEP1P15822 2718 aa0.36□□□□□ -2.35
CLTC-204ENST00000472129 LINC01549A6NIU2 74 aa0.36□□□□□ -2.35
CLTC-204ENST00000472129 NCBP2-AS2Q69YL0 99 aa0.36□□□□□ -2.35
CLTC-204ENST00000472129 KIAA0586Q9BVV6 1533 aa0.36□□□□□ -2.35
CLTC-204ENST00000472129 EPG5Q9HCE0 2579 aa0.35□□□□□ -2.35
CLTC-204ENST00000472129 TNRC18O15417 2968 aaPredicted RBP0.35□□□□□ -2.35
CLTC-204ENST00000472129 NMES1Q9C002 83 aa0.35□□□□□ -2.35
CLTC-204ENST00000472129 DSPP15924 2871 aaKnown RBP0.35□□□□□ -2.35
CLTC-204ENST00000472129 H0YAA0 97 aa0.34□□□□□ -2.36
CLTC-204ENST00000472129 SPRR2DP22532 72 aa0.34□□□□□ -2.36
CLTC-204ENST00000472129 CRIP1P50238 77 aa0.34□□□□□ -2.36
CLTC-204ENST00000472129 ANKRD11Q6UB99 2663 aaPredicted RBP0.34□□□□□ -2.36
CLTC-204ENST00000472129 FASNP49327 2511 aaKnown RBP0.34□□□□□ -2.36
CLTC-204ENST00000472129 FLNBO75369 2602 aaKnown RBP0.34□□□□□ -2.36
CLTC-204ENST00000472129 C3P01024 1663 aa0.33□□□□□ -2.36
CLTC-204ENST00000472129 RIF1Q5UIP0 2472 aaKnown RBP0.33□□□□□ -2.36
CLTC-204ENST00000472129 COL7A1Q02388 2944 aa0.33□□□□□ -2.36
CLTC-204ENST00000472129 IAPPP10997 89 aa0.33□□□□□ -2.36
CLTC-204ENST00000472129 WDFY4Q6ZS81 3184 aa0.33□□□□□ -2.36
CLTC-204ENST00000472129 HMCN2Q8NDA2 5059 aa0.33□□□□□ -2.36
CLTC-204ENST00000472129 TENM2Q9NT68 2774 aa0.33□□□□□ -2.36
CLTC-204ENST00000472129 ACANP16112 2415 aa0.33□□□□□ -2.36
CLTC-204ENST00000472129 LRRK2Q5S007 2527 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 FLNCQ14315 2725 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 CELSR3Q9NYQ7 3312 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 PRM1P04553 51 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 MYCBP2O75592 4640 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 ABCC6O95255 1503 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 TIAM1Q13009 1591 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 COL12A1Q99715 3063 aa0.32□□□□□ -2.36
CLTC-204ENST00000472129 PRRC2CQ9Y520 2896 aaKnown RBP0.31□□□□□ -2.36
CLTC-204ENST00000472129 MADDQ8WXG6 1647 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 PCNX1Q96RV3 2341 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 NBASA2RRP1 2371 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 SFTA3P0C7M3 94 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 MINOS1Q5TGZ0 78 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 FAT2Q9NYQ8 4349 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 ABCA10Q8WWZ4 1543 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 PRKDCP78527 4128 aaKnown RBP0.31□□□□□ -2.36
CLTC-204ENST00000472129 AKAP13Q12802 2813 aa0.31□□□□□ -2.36
CLTC-204ENST00000472129 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
CLTC-204ENST00000472129 DEFB130BP0DP73 79 aa0.3□□□□□ -2.36
CLTC-204ENST00000472129 DEFB130AP0DP74 79 aa0.3□□□□□ -2.36
CLTC-204ENST00000472129 SYNE1Q8NF91 8797 aaKnown RBP0.3□□□□□ -2.36
CLTC-204ENST00000472129 USP9YO00507 2555 aaPredicted RBP0.3□□□□□ -2.36
CLTC-204ENST00000472129 GCN1Q92616 2671 aaKnown RBP0.29□□□□□ -2.36
CLTC-204ENST00000472129 ABCA6Q8N139 1617 aa0.29□□□□□ -2.36
CLTC-204ENST00000472129 H3BUA1 57 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms