RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 DEFB105AQ8NG35 78 aa10.85□□□□□ -0.67
HSPG2-208ENST00000471322 SMCR5Q8TEV8 140 aa10.85□□□□□ -0.67
HSPG2-208ENST00000471322 SRRM2Q9UQ35 2752 aaKnown RBP10.84□□□□□ -0.67
HSPG2-208ENST00000471322 BCE1O60756 84 aa10.84□□□□□ -0.67
HSPG2-208ENST00000471322 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
HSPG2-208ENST00000471322 KRTAP11-1Q8IUC1 163 aa10.84□□□□□ -0.67
HSPG2-208ENST00000471322 Q8N1X5 172 aa10.84□□□□□ -0.67
HSPG2-208ENST00000471322 CIRBP-AS1Q8TBR5 109 aa10.84□□□□□ -0.67
HSPG2-208ENST00000471322 ERC2-IT1O76042 136 aa10.83□□□□□ -0.68
HSPG2-208ENST00000471322 Q6ZQT0 140 aa10.83□□□□□ -0.68
HSPG2-208ENST00000471322 UBE2AP49459 152 aa10.82□□□□□ -0.68
HSPG2-208ENST00000471322 PRLHP81277 87 aa10.82□□□□□ -0.68
HSPG2-208ENST00000471322 TRBV7-4A0A0J9YYF1 115 aa10.8□□□□□ -0.68
HSPG2-208ENST00000471322 ST20-AS1Q8NBB2 130 aa10.8□□□□□ -0.68
HSPG2-208ENST00000471322 HIGD2AQ9BW72 106 aa10.8□□□□□ -0.68
HSPG2-208ENST00000471322 MT-ATP8P03928 68 aa10.79□□□□□ -0.68
HSPG2-208ENST00000471322 LINC00643Q86TS7 51 aa10.79□□□□□ -0.68
HSPG2-208ENST00000471322 VPS13BQ7Z7G8 4022 aa10.79□□□□□ -0.68
HSPG2-208ENST00000471322 Q5VSD8 79 aa10.78□□□□□ -0.68
HSPG2-208ENST00000471322 KRTAP13-1Q8IUC0 172 aa10.76□□□□□ -0.69
HSPG2-208ENST00000471322 LINC00846Q9NV44 126 aa10.76□□□□□ -0.69
HSPG2-208ENST00000471322 SCGB1A1P11684 91 aa10.74□□□□□ -0.69
HSPG2-208ENST00000471322 FAM229AH3BQW9 127 aa10.73□□□□□ -0.69
HSPG2-208ENST00000471322 F8WEM9 126 aa10.73□□□□□ -0.69
HSPG2-208ENST00000471322 PSORS1C2Q9UIG4 136 aa10.73□□□□□ -0.69
HSPG2-208ENST00000471322 SPRR1BP22528 89 aa10.72□□□□□ -0.69
HSPG2-208ENST00000471322 UBL5Q9BZL1 73 aa10.71□□□□□ -0.69
HSPG2-208ENST00000471322 SMIM29Q86T20 159 aa10.7□□□□□ -0.7
HSPG2-208ENST00000471322 C3orf22Q8N5N4 141 aa10.7□□□□□ -0.7
HSPG2-208ENST00000471322 MYCBP2O75592 4640 aa10.7□□□□□ -0.7
HSPG2-208ENST00000471322 A0A1B0GW54 56 aa10.69□□□□□ -0.7
HSPG2-208ENST00000471322 Q6Q795 121 aa10.69□□□□□ -0.7
HSPG2-208ENST00000471322 IMUPQ9GZP8 106 aa10.69□□□□□ -0.7
HSPG2-208ENST00000471322 C1orf137Q5JT78 98 aa10.68□□□□□ -0.7
HSPG2-208ENST00000471322 TRBV7-7A0A0K0K1E9 115 aa10.67□□□□□ -0.7
HSPG2-208ENST00000471322 Q6JHZ5 121 aa10.67□□□□□ -0.7
HSPG2-208ENST00000471322 ZNF706Q9Y5V0 76 aaPredicted RBP10.66□□□□□ -0.7
HSPG2-208ENST00000471322 IGLV8-61A0A075B6I0 122 aa10.66□□□□□ -0.7
HSPG2-208ENST00000471322 ZNF861PO60384 105 aa10.66□□□□□ -0.7
HSPG2-208ENST00000471322 ATP5EP2Q5VTU8 51 aa10.65□□□□□ -0.7
HSPG2-208ENST00000471322 FLG2Q5D862 2391 aaPredicted RBP10.64□□□□□ -0.71
HSPG2-208ENST00000471322 PLA2G1BP04054 148 aaKnown RBP10.64□□□□□ -0.71
HSPG2-208ENST00000471322 RPL37AP61513 92 aaKnown RBP10.62□□□□□ -0.71
HSPG2-208ENST00000471322 Q8NBF4 154 aa10.62□□□□□ -0.71
HSPG2-208ENST00000471322 IGLV7-43P04211 117 aa10.61□□□□□ -0.71
HSPG2-208ENST00000471322 SPRR4Q96PI1 79 aa10.61□□□□□ -0.71
HSPG2-208ENST00000471322 KRTAP10-4P60372 401 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-208ENST00000471322 Q6ZVQ6 151 aa10.6□□□□□ -0.71
HSPG2-208ENST00000471322 A0A1W2PNM2 257 aa10.59□□□□□ -0.71
HSPG2-208ENST00000471322 PCP4P48539 62 aa10.59□□□□□ -0.71
HSPG2-208ENST00000471322 LINC00483Q53H64 154 aa10.59□□□□□ -0.71
HSPG2-208ENST00000471322 IGKV3D-7A0A0C4DH55 119 aa10.57□□□□□ -0.72
HSPG2-208ENST00000471322 IGFL1Q6UW32 110 aa10.57□□□□□ -0.72
HSPG2-208ENST00000471322 CRYGAP11844 174 aa10.56□□□□□ -0.72
HSPG2-208ENST00000471322 LRP1Q07954 4544 aaKnown RBP10.56□□□□□ -0.72
HSPG2-208ENST00000471322 NREPQ16612 68 aa10.55□□□□□ -0.72
HSPG2-208ENST00000471322 CXCL6P80162 114 aa10.55□□□□□ -0.72
HSPG2-208ENST00000471322 PKHD1L1Q86WI1 4243 aa10.49□□□□□ -0.73
HSPG2-208ENST00000471322 HERC1Q15751 4861 aa10.48□□□□□ -0.73
HSPG2-208ENST00000471322 HIST1H4AP62805 103 aaKnown RBP10.47□□□□□ -0.73
HSPG2-208ENST00000471322 FAT3Q8TDW7 4589 aa10.47□□□□□ -0.73
HSPG2-208ENST00000471322 C9orf153Q5TBE3 101 aa10.47□□□□□ -0.73
HSPG2-208ENST00000471322 IGLV9-49A0A0B4J1Y8 123 aa10.46□□□□□ -0.74
HSPG2-208ENST00000471322 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
HSPG2-208ENST00000471322 BPY2O14599 106 aa10.45□□□□□ -0.74
HSPG2-208ENST00000471322 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
HSPG2-208ENST00000471322 FAM236AA0A1B0GUQ0 79 aa10.44□□□□□ -0.74
HSPG2-208ENST00000471322 FAM236BA0A1B0GV22 79 aa10.44□□□□□ -0.74
HSPG2-208ENST00000471322 A0A087WSZ3 146 aa10.42□□□□□ -0.74
HSPG2-208ENST00000471322 ANAPC13Q9BS18 74 aa10.41□□□□□ -0.74
HSPG2-208ENST00000471322 MOBPQ13875 183 aa10.4□□□□□ -0.75
HSPG2-208ENST00000471322 ANAPC11Q9NYG5 84 aa10.4□□□□□ -0.75
HSPG2-208ENST00000471322 A0A087WVE0 104 aa10.39□□□□□ -0.75
HSPG2-208ENST00000471322 ATOX1O00244 68 aa10.36□□□□□ -0.75
HSPG2-208ENST00000471322 FAM229BQ4G0N7 80 aa10.36□□□□□ -0.75
HSPG2-208ENST00000471322 SSBP3-AS1Q7Z2R9 100 aa10.36□□□□□ -0.75
HSPG2-208ENST00000471322 J3QL48 77 aa10.35□□□□□ -0.75
HSPG2-208ENST00000471322 SS18L2Q9UHA2 77 aa10.33□□□□□ -0.76
HSPG2-208ENST00000471322 KRTAP29-1A8MX34 341 aaPredicted RBP10.33□□□□□ -0.76
HSPG2-208ENST00000471322 SPINK6Q6UWN8 80 aa10.33□□□□□ -0.76
HSPG2-208ENST00000471322 IGKV4-1P06312 121 aa10.31□□□□□ -0.76
HSPG2-208ENST00000471322 CD164Q04900 197 aa10.31□□□□□ -0.76
HSPG2-208ENST00000471322 DSCR10P59022 87 aa10.29□□□□□ -0.76
HSPG2-208ENST00000471322 OXTP01178 125 aa10.29□□□□□ -0.76
HSPG2-208ENST00000471322 LINC00472Q9H8W2 130 aa10.29□□□□□ -0.76
HSPG2-208ENST00000471322 J3KT08 172 aa10.28□□□□□ -0.76
HSPG2-208ENST00000471322 Q8N9L7 120 aa10.28□□□□□ -0.76
HSPG2-208ENST00000471322 TNXBP22105 4242 aa10.28□□□□□ -0.76
HSPG2-208ENST00000471322 HRCT1Q6UXD1 115 aa10.26□□□□□ -0.77
HSPG2-208ENST00000471322 KRTAP1-4P0C5Y4 121 aa10.25□□□□□ -0.77
HSPG2-208ENST00000471322 SMIM20Q8N5G0 67 aa10.25□□□□□ -0.77
HSPG2-208ENST00000471322 A0A087X002 238 aa10.24□□□□□ -0.77
HSPG2-208ENST00000471322 DEFB116Q30KQ4 102 aa10.23□□□□□ -0.77
HSPG2-208ENST00000471322 K7EQZ3 153 aa10.22□□□□□ -0.77
HSPG2-208ENST00000471322 MT1HL1P0DM35 61 aa10.22□□□□□ -0.77
HSPG2-208ENST00000471322 SERP2Q8N6R1 65 aa10.22□□□□□ -0.77
HSPG2-208ENST00000471322 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
HSPG2-208ENST00000471322 A8MWP4 228 aa10.21□□□□□ -0.78
HSPG2-208ENST00000471322 UQCRQO14949 82 aa10.19□□□□□ -0.78
HSPG2-208ENST00000471322 COX7CP15954 63 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms