RNA–Protein interactions for RNA: ENST00000471308.5

PCBP4-208, Transcript of poly(rC) binding protein 4, human

TSL 2

Gene PCBP4, Length 2,087 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP4-208	ENST00000471308	PHF5A	Q7RTV0	110 aa	Known RBP	10.61	□□□□□ -0.71
PCBP4-208	ENST00000471308	SERP1	Q9Y6X1	66 aa		10.6	□□□□□ -0.71
PCBP4-208	ENST00000471308		H7BZZ5	65 aa		10.59	□□□□□ -0.71
PCBP4-208	ENST00000471308	DNAH7	Q8WXX0	4024 aa		10.59	□□□□□ -0.71
PCBP4-208	ENST00000471308	PLEC	Q15149	4684 aa	Known RBP	10.58	□□□□□ -0.72
PCBP4-208	ENST00000471308	C4orf26	Q17RF5	130 aa		10.58	□□□□□ -0.72
PCBP4-208	ENST00000471308	IGFL1	Q6UW32	110 aa		10.58	□□□□□ -0.72
PCBP4-208	ENST00000471308	SPRR1B	P22528	89 aa		10.56	□□□□□ -0.72
PCBP4-208	ENST00000471308	UBE2A	P49459	152 aa		10.56	□□□□□ -0.72
PCBP4-208	ENST00000471308	KRTAP11-1	Q8IUC1	163 aa		10.56	□□□□□ -0.72
PCBP4-208	ENST00000471308	OCR1	Q9BZK8	76 aa		10.54	□□□□□ -0.72
PCBP4-208	ENST00000471308	NDUFC1	O43677	76 aa		10.53	□□□□□ -0.72
PCBP4-208	ENST00000471308	HRCT1	Q6UXD1	115 aa		10.53	□□□□□ -0.72
PCBP4-208	ENST00000471308	TENM2	Q9NT68	2774 aa		10.51	□□□□□ -0.73
PCBP4-208	ENST00000471308	DSCR10	P59022	87 aa		10.51	□□□□□ -0.73
PCBP4-208	ENST00000471308	SNURF	Q9Y675	71 aa		10.51	□□□□□ -0.73
PCBP4-208	ENST00000471308	TMEM254	Q8TBM7	123 aa		10.5	□□□□□ -0.73
PCBP4-208	ENST00000471308	SPACA4	Q8TDM5	124 aa		10.49	□□□□□ -0.73
PCBP4-208	ENST00000471308	ATP5E	P56381	51 aa	Predicted RBP	10.49	□□□□□ -0.73
PCBP4-208	ENST00000471308	VPS13D	Q5THJ4	4388 aa		10.49	□□□□□ -0.73
PCBP4-208	ENST00000471308		A0A087WTM6	91 aa		10.48	□□□□□ -0.73
PCBP4-208	ENST00000471308	PANO1	I0J062	215 aa		10.48	□□□□□ -0.73
PCBP4-208	ENST00000471308	STARD9	Q9P2P6	4700 aa		10.47	□□□□□ -0.73
PCBP4-208	ENST00000471308		A0A087WSZ3	146 aa		10.47	□□□□□ -0.73
PCBP4-208	ENST00000471308		K7EQZ3	153 aa		10.47	□□□□□ -0.73
PCBP4-208	ENST00000471308	KRTAP13-1	Q8IUC0	172 aa		10.47	□□□□□ -0.73
PCBP4-208	ENST00000471308		A0A0G2JQZ4	141 aa		10.46	□□□□□ -0.73
PCBP4-208	ENST00000471308	SMIM26	A0A096LP01	95 aa		10.46	□□□□□ -0.74
PCBP4-208	ENST00000471308	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.44	□□□□□ -0.74
PCBP4-208	ENST00000471308	PRKDC	P78527	4128 aa	Known RBP	10.44	□□□□□ -0.74
PCBP4-208	ENST00000471308		A0A0U1RQV1	116 aa		10.42	□□□□□ -0.74
PCBP4-208	ENST00000471308	HCG22	E2RYF7	251 aa		10.42	□□□□□ -0.74
PCBP4-208	ENST00000471308		Q6ZR54	194 aa		10.42	□□□□□ -0.74
PCBP4-208	ENST00000471308	RTL8C	O15255	209 aa		10.4	□□□□□ -0.74
PCBP4-208	ENST00000471308	PRO0628	Q9UI54	55 aa		10.4	□□□□□ -0.74
PCBP4-208	ENST00000471308	LCE6A	A0A183	80 aa		10.4	□□□□□ -0.75
PCBP4-208	ENST00000471308	FAM30A	Q9NZY2	134 aa		10.4	□□□□□ -0.75
PCBP4-208	ENST00000471308	FP248	Q71RG6	208 aa	Predicted RBP	10.38	□□□□□ -0.75
PCBP4-208	ENST00000471308	DEFB116	Q30KQ4	102 aa		10.35	□□□□□ -0.75
PCBP4-208	ENST00000471308	ZNF706	Q9Y5V0	76 aa	Predicted RBP	10.35	□□□□□ -0.75
PCBP4-208	ENST00000471308	LINC00336	Q6ZUF6	198 aa		10.34	□□□□□ -0.75
PCBP4-208	ENST00000471308	HECTD4	Q9Y4D8	3996 aa		10.34	□□□□□ -0.75
PCBP4-208	ENST00000471308	RPL37A	P61513	92 aa	Known RBP	10.34	□□□□□ -0.75
PCBP4-208	ENST00000471308	LINC00483	Q53H64	154 aa		10.34	□□□□□ -0.75
PCBP4-208	ENST00000471308	PLAC8	Q9NZF1	115 aa		10.34	□□□□□ -0.75
PCBP4-208	ENST00000471308	LINC00472	Q9H8W2	130 aa		10.33	□□□□□ -0.76
PCBP4-208	ENST00000471308	IGLV5-52	A0A0A0MRZ9	124 aa		10.32	□□□□□ -0.76
PCBP4-208	ENST00000471308	C1orf134	Q5TEV5	83 aa		10.32	□□□□□ -0.76
PCBP4-208	ENST00000471308	SRRM2	Q9UQ35	2752 aa	Known RBP	10.32	□□□□□ -0.76
PCBP4-208	ENST00000471308	MEGF8	Q7Z7M0	2845 aa		10.31	□□□□□ -0.76
PCBP4-208	ENST00000471308		A8MWP4	228 aa		10.3	□□□□□ -0.76
PCBP4-208	ENST00000471308	PRR15	Q8IV56	129 aa		10.3	□□□□□ -0.76
PCBP4-208	ENST00000471308	PSORS1C2	Q9UIG4	136 aa		10.3	□□□□□ -0.76
PCBP4-208	ENST00000471308	WFDC13	Q8IUB5	93 aa		10.29	□□□□□ -0.76
PCBP4-208	ENST00000471308	DNAH17	Q9UFH2	4485 aa		10.28	□□□□□ -0.76
PCBP4-208	ENST00000471308	IGLV9-49	A0A0B4J1Y8	123 aa		10.27	□□□□□ -0.76
PCBP4-208	ENST00000471308	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.27	□□□□□ -0.76
PCBP4-208	ENST00000471308	KMT2A	Q03164	3969 aa		10.26	□□□□□ -0.77
PCBP4-208	ENST00000471308	ZNF861P	O60384	105 aa		10.26	□□□□□ -0.77
PCBP4-208	ENST00000471308	ZCCHC13	Q8WW36	166 aa	Known RBP	10.26	□□□□□ -0.77
PCBP4-208	ENST00000471308	CASC2	Q6XLA1	102 aa		10.25	□□□□□ -0.77
PCBP4-208	ENST00000471308	DNAH2	Q9P225	4427 aa		10.25	□□□□□ -0.77
PCBP4-208	ENST00000471308	WWC2-AS2	Q96NR7	200 aa		10.23	□□□□□ -0.77
PCBP4-208	ENST00000471308	LY6G6C	O95867	125 aa		10.22	□□□□□ -0.77
PCBP4-208	ENST00000471308	NDUFB1	O75438	58 aa		10.21	□□□□□ -0.77
PCBP4-208	ENST00000471308	DNAH6	Q9C0G6	4158 aa		10.21	□□□□□ -0.78
PCBP4-208	ENST00000471308	MP68	P56378	58 aa		10.21	□□□□□ -0.78
PCBP4-208	ENST00000471308	DNHD1	Q96M86	4753 aa		10.19	□□□□□ -0.78
PCBP4-208	ENST00000471308	FBN3	Q75N90	2809 aa		10.18	□□□□□ -0.78
PCBP4-208	ENST00000471308		Q96NJ1	140 aa		10.18	□□□□□ -0.78
PCBP4-208	ENST00000471308	MOBP	Q13875	183 aa		10.18	□□□□□ -0.78
PCBP4-208	ENST00000471308		H3BPC8	53 aa		10.16	□□□□□ -0.78
PCBP4-208	ENST00000471308	DNAH8	Q96JB1	4490 aa		10.16	□□□□□ -0.78
PCBP4-208	ENST00000471308	MMP24-AS1	A0A0U1RRL7	71 aa		10.16	□□□□□ -0.78
PCBP4-208	ENST00000471308	IGLV7-43	P04211	117 aa		10.15	□□□□□ -0.78
PCBP4-208	ENST00000471308	FAM229B	Q4G0N7	80 aa		10.15	□□□□□ -0.78
PCBP4-208	ENST00000471308	KRTAP21-3	Q3LHN1	58 aa		10.14	□□□□□ -0.79
PCBP4-208	ENST00000471308	hDV103S1	A0JD37	113 aa		10.12	□□□□□ -0.79
PCBP4-208	ENST00000471308		H0Y9P7	68 aa		10.11	□□□□□ -0.79
PCBP4-208	ENST00000471308	FRAS1	Q86XX4	4008 aa		10.11	□□□□□ -0.79
PCBP4-208	ENST00000471308	TRAV22	A0A0B4J277	110 aa		10.11	□□□□□ -0.79
PCBP4-208	ENST00000471308	LINC00208	Q96KT6	92 aa		10.1	□□□□□ -0.79
PCBP4-208	ENST00000471308	ANAPC11	Q9NYG5	84 aa		10.1	□□□□□ -0.79
PCBP4-208	ENST00000471308	TG	P01266	2768 aa		10.1	□□□□□ -0.79
PCBP4-208	ENST00000471308	ASB16-AS1	Q495Z4	193 aa		10.09	□□□□□ -0.79
PCBP4-208	ENST00000471308	BRK1	Q8WUW1	75 aa		10.08	□□□□□ -0.8
PCBP4-208	ENST00000471308	CYP4F30P	Q9H0H9	118 aa		10.08	□□□□□ -0.8
PCBP4-208	ENST00000471308		A0A1B0GVX0	72 aa		10.07	□□□□□ -0.8
PCBP4-208	ENST00000471308	CDK2AP2	O75956	126 aa		10.07	□□□□□ -0.8
PCBP4-208	ENST00000471308	C8orf17	Q9NRJ1	99 aa		10.07	□□□□□ -0.8
PCBP4-208	ENST00000471308	TP53AIP1	Q9HCN2	124 aa		10.06	□□□□□ -0.8
PCBP4-208	ENST00000471308	ALMS1	Q8TCU4	4167 aa		10.06	□□□□□ -0.8
PCBP4-208	ENST00000471308	KRTAP10-2	P60368	255 aa		10.06	□□□□□ -0.8
PCBP4-208	ENST00000471308	CIRBP-AS1	Q8TBR5	109 aa		10.06	□□□□□ -0.8
PCBP4-208	ENST00000471308	MPLKIP	Q8TAP9	179 aa		10.05	□□□□□ -0.8
PCBP4-208	ENST00000471308	CD164	Q04900	197 aa		10.05	□□□□□ -0.8
PCBP4-208	ENST00000471308		Q1T7F1	81 aa		10.05	□□□□□ -0.8
PCBP4-208	ENST00000471308	IGHV6-1	A0A0B4J1U7	121 aa		10.02	□□□□□ -0.81
PCBP4-208	ENST00000471308	SPANXA2-OT1	Q8N9U9	137 aa		10.02	□□□□□ -0.81
PCBP4-208	ENST00000471308	C1orf64	Q8NEQ6	169 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms