RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SSBP3-AS1Q7Z2R9 100 aa8.69□□□□□ -1.02
CDC42SE1-203ENST00000470278 Q8N377 158 aa8.69□□□□□ -1.02
CDC42SE1-203ENST00000470278 Q8NBF4 154 aa8.69□□□□□ -1.02
CDC42SE1-203ENST00000470278 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
CDC42SE1-203ENST00000470278 OCIAD2Q56VL3 154 aa8.67□□□□□ -1.02
CDC42SE1-203ENST00000470278 C9orf153Q5TBE3 101 aa8.67□□□□□ -1.02
CDC42SE1-203ENST00000470278 SPAG11AQ6PDA7 123 aa8.66□□□□□ -1.02
CDC42SE1-203ENST00000470278 CLEC2BQ92478 149 aa8.65□□□□□ -1.02
CDC42SE1-203ENST00000470278 GHRHP01286 108 aa8.64□□□□□ -1.03
CDC42SE1-203ENST00000470278 BATFQ16520 125 aa8.64□□□□□ -1.03
CDC42SE1-203ENST00000470278 SPINK1P00995 79 aa8.62□□□□□ -1.03
CDC42SE1-203ENST00000470278 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-203ENST00000470278 LST1O00453 97 aa8.61□□□□□ -1.03
CDC42SE1-203ENST00000470278 DNAL4O96015 105 aa8.61□□□□□ -1.03
CDC42SE1-203ENST00000470278 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
CDC42SE1-203ENST00000470278 F8WEM9 126 aa8.6□□□□□ -1.03
CDC42SE1-203ENST00000470278 TRACP01848 142 aa8.6□□□□□ -1.03
CDC42SE1-203ENST00000470278 SCGB1C2P0DMR2 95 aa8.6□□□□□ -1.03
CDC42SE1-203ENST00000470278 IGLV8-61A0A075B6I0 122 aa8.59□□□□□ -1.03
CDC42SE1-203ENST00000470278 H3BQ85 93 aa8.59□□□□□ -1.03
CDC42SE1-203ENST00000470278 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
CDC42SE1-203ENST00000470278 SNHG12Q9BXW3 62 aa8.58□□□□□ -1.04
CDC42SE1-203ENST00000470278 CD164Q04900 197 aa8.57□□□□□ -1.04
CDC42SE1-203ENST00000470278 ORMDL1Q9P0S3 153 aa8.57□□□□□ -1.04
CDC42SE1-203ENST00000470278 Q6JHZ5 121 aa8.56□□□□□ -1.04
CDC42SE1-203ENST00000470278 NAA38Q9BRA0 125 aaKnown RBP8.56□□□□□ -1.04
CDC42SE1-203ENST00000470278 TAX1BP3O14907 124 aa8.55□□□□□ -1.04
CDC42SE1-203ENST00000470278 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
CDC42SE1-203ENST00000470278 TMEM256-PLSCR3K7ERE1 68 aa8.54□□□□□ -1.04
CDC42SE1-203ENST00000470278 NDUFV3P56181 108 aaKnown RBP8.54□□□□□ -1.04
CDC42SE1-203ENST00000470278 ATXN8Q156A1 80 aa8.54□□□□□ -1.04
CDC42SE1-203ENST00000470278 TRBV20-1A0A075B6N2 111 aa8.53□□□□□ -1.04
CDC42SE1-203ENST00000470278 H3BUT2 72 aa8.53□□□□□ -1.04
CDC42SE1-203ENST00000470278 TCL1BO95988 128 aa8.53□□□□□ -1.04
CDC42SE1-203ENST00000470278 FABP2P12104 132 aa8.52□□□□□ -1.05
CDC42SE1-203ENST00000470278 COL5A1-AS1Q5SY13 56 aa8.51□□□□□ -1.05
CDC42SE1-203ENST00000470278 IGFL1Q6UW32 110 aa8.51□□□□□ -1.05
CDC42SE1-203ENST00000470278 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
CDC42SE1-203ENST00000470278 MUC2Q02817 5179 aa8.51□□□□□ -1.05
CDC42SE1-203ENST00000470278 A0A1W2PPM0 123 aa8.5□□□□□ -1.05
CDC42SE1-203ENST00000470278 UBE2V1Q13404 147 aa8.5□□□□□ -1.05
CDC42SE1-203ENST00000470278 Q5XG85 94 aa8.5□□□□□ -1.05
CDC42SE1-203ENST00000470278 PCP4L1A6NKN8 68 aa8.49□□□□□ -1.05
CDC42SE1-203ENST00000470278 A0A0G2JQZ4 141 aa8.48□□□□□ -1.05
CDC42SE1-203ENST00000470278 H3BMG7 143 aa8.48□□□□□ -1.05
CDC42SE1-203ENST00000470278 PRR4Q16378 134 aa8.47□□□□□ -1.05
CDC42SE1-203ENST00000470278 HRCT1Q6UXD1 115 aa8.47□□□□□ -1.05
CDC42SE1-203ENST00000470278 FP248Q71RG6 208 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE1-203ENST00000470278 RETNLBQ9BQ08 111 aa8.47□□□□□ -1.05
CDC42SE1-203ENST00000470278 Q6Q795 121 aa8.45□□□□□ -1.06
CDC42SE1-203ENST00000470278 BAALC-AS2P0C853 105 aa8.44□□□□□ -1.06
CDC42SE1-203ENST00000470278 TRBV7-7A0A0K0K1E9 115 aa8.43□□□□□ -1.06
CDC42SE1-203ENST00000470278 ANKRD29Q8N6D5 301 aa8.43□□□□□ -1.06
CDC42SE1-203ENST00000470278 TEN1Q86WV5 123 aa8.41□□□□□ -1.06
CDC42SE1-203ENST00000470278 IGLV7-46A0A075B6I9 117 aa8.4□□□□□ -1.06
CDC42SE1-203ENST00000470278 C9JAW5 83 aa8.4□□□□□ -1.06
CDC42SE1-203ENST00000470278 ASB16-AS1Q495Z4 193 aa8.4□□□□□ -1.06
CDC42SE1-203ENST00000470278 TRBV7-4A0A0J9YYF1 115 aa8.39□□□□□ -1.07
CDC42SE1-203ENST00000470278 TPRXLQ17RH7 258 aa8.39□□□□□ -1.07
CDC42SE1-203ENST00000470278 SPCS1Q9Y6A9 102 aa8.39□□□□□ -1.07
CDC42SE1-203ENST00000470278 H3BT86 120 aa8.38□□□□□ -1.07
CDC42SE1-203ENST00000470278 RBM3P98179 157 aaKnown RBP8.38□□□□□ -1.07
CDC42SE1-203ENST00000470278 A0A1B0GV72 72 aa8.37□□□□□ -1.07
CDC42SE1-203ENST00000470278 JMJD7-PLA2G4BH0Y9G9 81 aa8.37□□□□□ -1.07
CDC42SE1-203ENST00000470278 A0A1W2PNM2 257 aa8.36□□□□□ -1.07
CDC42SE1-203ENST00000470278 DSCR8Q96T75 97 aa8.36□□□□□ -1.07
CDC42SE1-203ENST00000470278 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
CDC42SE1-203ENST00000470278 C1orf195Q5TG92 126 aa8.35□□□□□ -1.07
CDC42SE1-203ENST00000470278 K7EP34 96 aa8.34□□□□□ -1.07
CDC42SE1-203ENST00000470278 FAT4Q6V0I7 4981 aa8.34□□□□□ -1.07
CDC42SE1-203ENST00000470278 A0A087WSZ3 146 aa8.33□□□□□ -1.08
CDC42SE1-203ENST00000470278 CCKP06307 115 aa8.33□□□□□ -1.08
CDC42SE1-203ENST00000470278 KRTAP13-3Q3SY46 172 aa8.33□□□□□ -1.08
CDC42SE1-203ENST00000470278 OBSCN-AS1Q96MR7 158 aa8.33□□□□□ -1.08
CDC42SE1-203ENST00000470278 LOC110117498A0A087WWA1 95 aa8.32□□□□□ -1.08
CDC42SE1-203ENST00000470278 PDE6GP18545 87 aa8.31□□□□□ -1.08
CDC42SE1-203ENST00000470278 MTURNQ8N3F0 131 aa8.31□□□□□ -1.08
CDC42SE1-203ENST00000470278 C21orf62-AS1Q17RA5 79 aa8.29□□□□□ -1.08
CDC42SE1-203ENST00000470278 LCE2AQ5TA79 106 aaPredicted RBP8.29□□□□□ -1.08
CDC42SE1-203ENST00000470278 Q6ZQT0 140 aa8.29□□□□□ -1.08
CDC42SE1-203ENST00000470278 GTF2H5Q6ZYL4 71 aa8.29□□□□□ -1.08
CDC42SE1-203ENST00000470278 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
CDC42SE1-203ENST00000470278 PRO0461Q9UI25 63 aa8.28□□□□□ -1.08
CDC42SE1-203ENST00000470278 A0A1B0GW54 56 aa8.27□□□□□ -1.09
CDC42SE1-203ENST00000470278 CDIP1Q9H305 208 aa8.27□□□□□ -1.09
CDC42SE1-203ENST00000470278 C14orf132Q9NPU4 83 aa8.27□□□□□ -1.09
CDC42SE1-203ENST00000470278 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
CDC42SE1-203ENST00000470278 MUC17Q685J3 4493 aa8.25□□□□□ -1.09
CDC42SE1-203ENST00000470278 Q96NJ1 140 aa8.25□□□□□ -1.09
CDC42SE1-203ENST00000470278 VPS25Q9BRG1 176 aa8.25□□□□□ -1.09
CDC42SE1-203ENST00000470278 F8W1H4 67 aa8.2□□□□□ -1.1
CDC42SE1-203ENST00000470278 LINC00472Q9H8W2 130 aa8.2□□□□□ -1.1
CDC42SE1-203ENST00000470278 XP32Q5T750 250 aa8.19□□□□□ -1.1
CDC42SE1-203ENST00000470278 C9orf92A6NGG3 77 aa8.16□□□□□ -1.1
CDC42SE1-203ENST00000470278 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
CDC42SE1-203ENST00000470278 SIGMAR1Q99720 223 aa8.14□□□□□ -1.11
CDC42SE1-203ENST00000470278 J3KT08 172 aa8.12□□□□□ -1.11
CDC42SE1-203ENST00000470278 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
CDC42SE1-203ENST00000470278 SEC61BP60468 96 aaKnown RBP8.09□□□□□ -1.11
CDC42SE1-203ENST00000470278 ETDBQ3ZM63 59 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms