RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 H3BMG7 143 aa7.25□□□□□ -1.25
HDAC6-217ENST00000469223 LST1O00453 97 aa7.25□□□□□ -1.25
HDAC6-217ENST00000469223 TCL1BO95988 128 aa7.25□□□□□ -1.25
HDAC6-217ENST00000469223 TRACP01848 142 aa7.25□□□□□ -1.25
HDAC6-217ENST00000469223 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
HDAC6-217ENST00000469223 C6orf99Q4VX62 202 aa7.25□□□□□ -1.25
HDAC6-217ENST00000469223 H3BQ85 93 aa7.24□□□□□ -1.25
HDAC6-217ENST00000469223 LINC00304Q8N9R0 145 aa7.24□□□□□ -1.25
HDAC6-217ENST00000469223 ZNF861PO60384 105 aa7.23□□□□□ -1.25
HDAC6-217ENST00000469223 COX7BP24311 80 aa7.23□□□□□ -1.25
HDAC6-217ENST00000469223 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
HDAC6-217ENST00000469223 Q8NDZ9 215 aa7.23□□□□□ -1.25
HDAC6-217ENST00000469223 KCNQ1DNQ9H478 68 aa7.23□□□□□ -1.25
HDAC6-217ENST00000469223 KRTAP13-2Q52LG2 175 aa7.22□□□□□ -1.25
HDAC6-217ENST00000469223 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
HDAC6-217ENST00000469223 LINC00167Q96N53 147 aa7.22□□□□□ -1.25
HDAC6-217ENST00000469223 ETDCA0A1B0GVM5 59 aa7.21□□□□□ -1.26
HDAC6-217ENST00000469223 C9JAW5 83 aa7.21□□□□□ -1.26
HDAC6-217ENST00000469223 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.26
HDAC6-217ENST00000469223 H3BT86 120 aa7.2□□□□□ -1.26
HDAC6-217ENST00000469223 ELOF1P60002 83 aaKnown RBP7.2□□□□□ -1.26
HDAC6-217ENST00000469223 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
HDAC6-217ENST00000469223 hADV29S1A0JD25 119 aa7.19□□□□□ -1.26
HDAC6-217ENST00000469223 RPL37AP8A6NKH3 93 aa7.19□□□□□ -1.26
HDAC6-217ENST00000469223 OCIAD2Q56VL3 154 aa7.19□□□□□ -1.26
HDAC6-217ENST00000469223 ANAPC11Q9NYG5 84 aa7.19□□□□□ -1.26
HDAC6-217ENST00000469223 DHRS4-AS1Q9P1J3 65 aa7.19□□□□□ -1.26
HDAC6-217ENST00000469223 LINC00575Q6W349 94 aa7.18□□□□□ -1.26
HDAC6-217ENST00000469223 ORMDL1Q9P0S3 153 aa7.18□□□□□ -1.26
HDAC6-217ENST00000469223 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
HDAC6-217ENST00000469223 KRTAP13-3Q3SY46 172 aa7.17□□□□□ -1.26
HDAC6-217ENST00000469223 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
HDAC6-217ENST00000469223 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
HDAC6-217ENST00000469223 TMEM256-PLSCR3K7ERE1 68 aa7.16□□□□□ -1.26
HDAC6-217ENST00000469223 SPRR1AP35321 89 aa7.16□□□□□ -1.26
HDAC6-217ENST00000469223 J3QR89 54 aa7.15□□□□□ -1.26
HDAC6-217ENST00000469223 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.15□□□□□ -1.26
HDAC6-217ENST00000469223 Q6ZRX8 168 aa7.15□□□□□ -1.26
HDAC6-217ENST00000469223 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
HDAC6-217ENST00000469223 FAM218AQ96MZ4 157 aa7.14□□□□□ -1.27
HDAC6-217ENST00000469223 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
HDAC6-217ENST00000469223 PPDPFLQ8WWR9 84 aa7.13□□□□□ -1.27
HDAC6-217ENST00000469223 B5MCH6 92 aa7.12□□□□□ -1.27
HDAC6-217ENST00000469223 BCE1O60756 84 aa7.12□□□□□ -1.27
HDAC6-217ENST00000469223 UBE2AP49459 152 aa7.12□□□□□ -1.27
HDAC6-217ENST00000469223 TEN1Q86WV5 123 aa7.12□□□□□ -1.27
HDAC6-217ENST00000469223 PRO0461Q9UI25 63 aa7.12□□□□□ -1.27
HDAC6-217ENST00000469223 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
HDAC6-217ENST00000469223 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
HDAC6-217ENST00000469223 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
HDAC6-217ENST00000469223 JMJD7-PLA2G4BH0Y9G9 81 aa7.1□□□□□ -1.27
HDAC6-217ENST00000469223 M0R2T5 61 aa7.1□□□□□ -1.27
HDAC6-217ENST00000469223 C21orf62-AS1Q17RA5 79 aa7.1□□□□□ -1.27
HDAC6-217ENST00000469223 Q6ZQY7 126 aa7.1□□□□□ -1.27
HDAC6-217ENST00000469223 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-217ENST00000469223 K7ERU9 68 aa7.09□□□□□ -1.27
HDAC6-217ENST00000469223 ETDBQ3ZM63 59 aa7.09□□□□□ -1.27
HDAC6-217ENST00000469223 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
HDAC6-217ENST00000469223 LAMTOR3Q9UHA4 124 aa7.07□□□□□ -1.28
HDAC6-217ENST00000469223 SMCPP49901 116 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-217ENST00000469223 HIGD2AQ9BW72 106 aa7.06□□□□□ -1.28
HDAC6-217ENST00000469223 ZNF706Q9Y5V0 76 aaPredicted RBP7.06□□□□□ -1.28
HDAC6-217ENST00000469223 PRLHP81277 87 aa7.05□□□□□ -1.28
HDAC6-217ENST00000469223 PDE6GP18545 87 aa7.04□□□□□ -1.28
HDAC6-217ENST00000469223 KRTAP13-1Q8IUC0 172 aa7.04□□□□□ -1.28
HDAC6-217ENST00000469223 Q9BRP9 147 aa7.04□□□□□ -1.28
HDAC6-217ENST00000469223 TEX49A0A1B0GTD5 131 aa7.03□□□□□ -1.28
HDAC6-217ENST00000469223 F8WEM9 126 aa7.03□□□□□ -1.28
HDAC6-217ENST00000469223 RBM3P98179 157 aaKnown RBP7.02□□□□□ -1.29
HDAC6-217ENST00000469223 DEFB105AQ8NG35 78 aa7.02□□□□□ -1.29
HDAC6-217ENST00000469223 SMCR5Q8TEV8 140 aa7.02□□□□□ -1.29
HDAC6-217ENST00000469223 DSCR8Q96T75 97 aa7.02□□□□□ -1.29
HDAC6-217ENST00000469223 IGLV5-48A0A075B6I7 105 aa7.01□□□□□ -1.29
HDAC6-217ENST00000469223 NDUFV3P56181 108 aaKnown RBP7.01□□□□□ -1.29
HDAC6-217ENST00000469223 C3orf22Q8N5N4 141 aa7.01□□□□□ -1.29
HDAC6-217ENST00000469223 XP32Q5T750 250 aa7□□□□□ -1.29
HDAC6-217ENST00000469223 ACYP1P07311 99 aa6.99□□□□□ -1.29
HDAC6-217ENST00000469223 OBSCN-AS1Q96MR7 158 aa6.98□□□□□ -1.29
HDAC6-217ENST00000469223 FAM240AA0A1B0GVK7 77 aa6.96□□□□□ -1.3
HDAC6-217ENST00000469223 ERC2-IT1O76042 136 aa6.96□□□□□ -1.3
HDAC6-217ENST00000469223 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
HDAC6-217ENST00000469223 Q8N377 158 aa6.96□□□□□ -1.3
HDAC6-217ENST00000469223 C14orf132Q9NPU4 83 aa6.96□□□□□ -1.3
HDAC6-217ENST00000469223 IGLV8-61A0A075B6I0 122 aa6.95□□□□□ -1.3
HDAC6-217ENST00000469223 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
HDAC6-217ENST00000469223 SPRR1BP22528 89 aa6.95□□□□□ -1.3
HDAC6-217ENST00000469223 GAGE2AQ6NT46 116 aa6.95□□□□□ -1.3
HDAC6-217ENST00000469223 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
HDAC6-217ENST00000469223 A0A1B0GW54 56 aa6.93□□□□□ -1.3
HDAC6-217ENST00000469223 Q6JHZ5 121 aa6.93□□□□□ -1.3
HDAC6-217ENST00000469223 KRTAP19-1Q8IUB9 90 aa6.93□□□□□ -1.3
HDAC6-217ENST00000469223 A0A1B0GV72 72 aa6.92□□□□□ -1.3
HDAC6-217ENST00000469223 CCKP06307 115 aa6.92□□□□□ -1.3
HDAC6-217ENST00000469223 PCOTHQ58A44 107 aa6.92□□□□□ -1.3
HDAC6-217ENST00000469223 SPRR4Q96PI1 79 aa6.92□□□□□ -1.3
HDAC6-217ENST00000469223 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
HDAC6-217ENST00000469223 COX6B2Q6YFQ2 88 aa6.91□□□□□ -1.3
HDAC6-217ENST00000469223 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.3
HDAC6-217ENST00000469223 VPS25Q9BRG1 176 aa6.9□□□□□ -1.3
HDAC6-217ENST00000469223 LINC00483Q53H64 154 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms