RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 KRTAP10-4P60372 401 aaPredicted RBP10.66□□□□□ -0.7
RPL39-202ENST00000468844 Q6ZQY7 126 aa10.64□□□□□ -0.71
RPL39-202ENST00000468844 OBSCN-AS1Q96MR7 158 aa10.63□□□□□ -0.71
RPL39-202ENST00000468844 KRTAP17-1Q9BYP8 105 aa10.63□□□□□ -0.71
RPL39-202ENST00000468844 LINC00643Q86TS7 51 aa10.62□□□□□ -0.71
RPL39-202ENST00000468844 IMUPQ9GZP8 106 aa10.62□□□□□ -0.71
RPL39-202ENST00000468844 GAGE2AQ6NT46 116 aa10.61□□□□□ -0.71
RPL39-202ENST00000468844 ST20-AS1Q8NBB2 130 aa10.61□□□□□ -0.71
RPL39-202ENST00000468844 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.6□□□□□ -0.71
RPL39-202ENST00000468844 ORMDL1Q9P0S3 153 aa10.6□□□□□ -0.71
RPL39-202ENST00000468844 FAM229AH3BQW9 127 aa10.59□□□□□ -0.71
RPL39-202ENST00000468844 Q5VSD8 79 aa10.59□□□□□ -0.71
RPL39-202ENST00000468844 LINC01547P58512 204 aaPredicted RBP10.58□□□□□ -0.72
RPL39-202ENST00000468844 C14orf132Q9NPU4 83 aa10.58□□□□□ -0.72
RPL39-202ENST00000468844 HERC2O95714 4834 aa10.57□□□□□ -0.72
RPL39-202ENST00000468844 PLA2G1BP04054 148 aaKnown RBP10.56□□□□□ -0.72
RPL39-202ENST00000468844 LRP1Q07954 4544 aaKnown RBP10.55□□□□□ -0.72
RPL39-202ENST00000468844 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
RPL39-202ENST00000468844 Q8N1X5 172 aa10.55□□□□□ -0.72
RPL39-202ENST00000468844 DEFB105AQ8NG35 78 aa10.54□□□□□ -0.72
RPL39-202ENST00000468844 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
RPL39-202ENST00000468844 Q8N377 158 aa10.53□□□□□ -0.72
RPL39-202ENST00000468844 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
RPL39-202ENST00000468844 SPINK6Q6UWN8 80 aa10.52□□□□□ -0.72
RPL39-202ENST00000468844 TMEM256-PLSCR3K7ERE1 68 aa10.52□□□□□ -0.73
RPL39-202ENST00000468844 CCDC179H3BU77 68 aa10.51□□□□□ -0.73
RPL39-202ENST00000468844 FLG2Q5D862 2391 aaPredicted RBP10.51□□□□□ -0.73
RPL39-202ENST00000468844 FAT3Q8TDW7 4589 aa10.51□□□□□ -0.73
RPL39-202ENST00000468844 ZNF706Q9Y5V0 76 aaPredicted RBP10.5□□□□□ -0.73
RPL39-202ENST00000468844 FAM236AA0A1B0GUQ0 79 aa10.5□□□□□ -0.73
RPL39-202ENST00000468844 FAM236BA0A1B0GV22 79 aa10.5□□□□□ -0.73
RPL39-202ENST00000468844 JMJD7-PLA2G4BH0Y9G9 81 aa10.5□□□□□ -0.73
RPL39-202ENST00000468844 C3orf22Q8N5N4 141 aa10.49□□□□□ -0.73
RPL39-202ENST00000468844 SPRR1BP22528 89 aa10.48□□□□□ -0.73
RPL39-202ENST00000468844 LINC00846Q9NV44 126 aa10.48□□□□□ -0.73
RPL39-202ENST00000468844 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
RPL39-202ENST00000468844 GHRHP01286 108 aa10.48□□□□□ -0.73
RPL39-202ENST00000468844 CCKP06307 115 aa10.48□□□□□ -0.73
RPL39-202ENST00000468844 LINC00483Q53H64 154 aa10.48□□□□□ -0.73
RPL39-202ENST00000468844 ANAPC11Q9NYG5 84 aa10.48□□□□□ -0.73
RPL39-202ENST00000468844 SMIM29Q86T20 159 aa10.47□□□□□ -0.73
RPL39-202ENST00000468844 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.73
RPL39-202ENST00000468844 H3BQ85 93 aa10.45□□□□□ -0.74
RPL39-202ENST00000468844 Q6JHZ5 121 aa10.45□□□□□ -0.74
RPL39-202ENST00000468844 TNXBP22105 4242 aa10.44□□□□□ -0.74
RPL39-202ENST00000468844 LAMTOR3Q9UHA4 124 aa10.42□□□□□ -0.74
RPL39-202ENST00000468844 KRTAP4-5Q9BYR2 181 aa10.41□□□□□ -0.74
RPL39-202ENST00000468844 A0A087X002 238 aa10.41□□□□□ -0.74
RPL39-202ENST00000468844 HIST1H4AP62805 103 aaKnown RBP10.4□□□□□ -0.74
RPL39-202ENST00000468844 SS18L2Q9UHA2 77 aa10.4□□□□□ -0.74
RPL39-202ENST00000468844 IGKV3D-7A0A0C4DH55 119 aa10.39□□□□□ -0.75
RPL39-202ENST00000468844 FAM229BQ4G0N7 80 aa10.38□□□□□ -0.75
RPL39-202ENST00000468844 IGLV9-49A0A0B4J1Y8 123 aa10.37□□□□□ -0.75
RPL39-202ENST00000468844 RBM3P98179 157 aaKnown RBP10.37□□□□□ -0.75
RPL39-202ENST00000468844 LOC110117498A0A087WWA1 95 aa10.35□□□□□ -0.75
RPL39-202ENST00000468844 F8WEM9 126 aa10.35□□□□□ -0.75
RPL39-202ENST00000468844 KRTAP13-2Q52LG2 175 aa10.35□□□□□ -0.75
RPL39-202ENST00000468844 Q6ZQT0 140 aa10.35□□□□□ -0.75
RPL39-202ENST00000468844 ATOX1O00244 68 aa10.34□□□□□ -0.75
RPL39-202ENST00000468844 UQCRQO14949 82 aa10.34□□□□□ -0.75
RPL39-202ENST00000468844 CRYGAP11844 174 aa10.34□□□□□ -0.75
RPL39-202ENST00000468844 C9orf153Q5TBE3 101 aa10.33□□□□□ -0.76
RPL39-202ENST00000468844 IGLV8-61A0A075B6I0 122 aa10.33□□□□□ -0.76
RPL39-202ENST00000468844 MOBPQ13875 183 aa10.33□□□□□ -0.76
RPL39-202ENST00000468844 ATP5EP2Q5VTU8 51 aa10.33□□□□□ -0.76
RPL39-202ENST00000468844 PRR26Q8N8Z3 221 aa10.31□□□□□ -0.76
RPL39-202ENST00000468844 A0A087WVE0 104 aa10.31□□□□□ -0.76
RPL39-202ENST00000468844 COX7CP15954 63 aa10.31□□□□□ -0.76
RPL39-202ENST00000468844 UBL5Q9BZL1 73 aa10.31□□□□□ -0.76
RPL39-202ENST00000468844 A0A0G2JQZ4 141 aa10.3□□□□□ -0.76
RPL39-202ENST00000468844 Q8NBF4 154 aa10.3□□□□□ -0.76
RPL39-202ENST00000468844 TRBV7-4A0A0J9YYF1 115 aa10.29□□□□□ -0.76
RPL39-202ENST00000468844 PDE6GP18545 87 aa10.29□□□□□ -0.76
RPL39-202ENST00000468844 DSCR8Q96T75 97 aa10.29□□□□□ -0.76
RPL39-202ENST00000468844 IGFL1Q6UW32 110 aa10.29□□□□□ -0.76
RPL39-202ENST00000468844 TYMSOSQ8TAI1 123 aa10.25□□□□□ -0.77
RPL39-202ENST00000468844 SSBP3-AS1Q7Z2R9 100 aa10.24□□□□□ -0.77
RPL39-202ENST00000468844 PCLOQ9Y6V0 5065 aa10.24□□□□□ -0.77
RPL39-202ENST00000468844 SERP2Q8N6R1 65 aa10.23□□□□□ -0.77
RPL39-202ENST00000468844 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
RPL39-202ENST00000468844 A0A1W2PNM2 257 aa10.21□□□□□ -0.78
RPL39-202ENST00000468844 Q6ZVQ6 151 aa10.2□□□□□ -0.78
RPL39-202ENST00000468844 KRTAP10-8P60410 259 aa10.18□□□□□ -0.78
RPL39-202ENST00000468844 HRCT1Q6UXD1 115 aa10.17□□□□□ -0.78
RPL39-202ENST00000468844 CXCL6P80162 114 aa10.15□□□□□ -0.78
RPL39-202ENST00000468844 MT1HL1P0DM35 61 aa10.15□□□□□ -0.79
RPL39-202ENST00000468844 OXTP01178 125 aa10.14□□□□□ -0.79
RPL39-202ENST00000468844 LINC00304Q8N9R0 145 aa10.13□□□□□ -0.79
RPL39-202ENST00000468844 SMIM20Q8N5G0 67 aa10.13□□□□□ -0.79
RPL39-202ENST00000468844 CD164Q04900 197 aa10.12□□□□□ -0.79
RPL39-202ENST00000468844 CYSTM1Q9H1C7 97 aa10.11□□□□□ -0.79
RPL39-202ENST00000468844 A0A087WSZ3 146 aa10.1□□□□□ -0.79
RPL39-202ENST00000468844 KRTAP29-1A8MX34 341 aaPredicted RBP10.1□□□□□ -0.79
RPL39-202ENST00000468844 C4orf48Q5BLP8 95 aa10.09□□□□□ -0.79
RPL39-202ENST00000468844 SPINK1P00995 79 aa10.07□□□□□ -0.8
RPL39-202ENST00000468844 A0A1B0GW54 56 aa10.07□□□□□ -0.8
RPL39-202ENST00000468844 SPAG11AQ6PDA7 123 aa10.07□□□□□ -0.8
RPL39-202ENST00000468844 TMEM258P61165 79 aa10.03□□□□□ -0.8
RPL39-202ENST00000468844 TRAV7A0A075B6U4 112 aa10.03□□□□□ -0.8
RPL39-202ENST00000468844 RPS29P62273 56 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms