RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 DPH3Q96FX2 82 aa10.55□□□□□ -0.72
NUP58-208ENST00000466694 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.55□□□□□ -0.72
NUP58-208ENST00000466694 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
NUP58-208ENST00000466694 RTL8CO15255 209 aa10.53□□□□□ -0.72
NUP58-208ENST00000466694 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
NUP58-208ENST00000466694 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
NUP58-208ENST00000466694 BCE1O60756 84 aa10.52□□□□□ -0.73
NUP58-208ENST00000466694 UBE2AP49459 152 aa10.52□□□□□ -0.73
NUP58-208ENST00000466694 SCXQ7RTU7 201 aa10.52□□□□□ -0.73
NUP58-208ENST00000466694 SERP2Q8N6R1 65 aa10.52□□□□□ -0.73
NUP58-208ENST00000466694 IGLV8-61A0A075B6I0 122 aa10.51□□□□□ -0.73
NUP58-208ENST00000466694 SACSQ9NZJ4 4579 aa10.51□□□□□ -0.73
NUP58-208ENST00000466694 SPRR1BP22528 89 aa10.5□□□□□ -0.73
NUP58-208ENST00000466694 C9orf153Q5TBE3 101 aa10.49□□□□□ -0.73
NUP58-208ENST00000466694 KRTAP13-1Q8IUC0 172 aa10.49□□□□□ -0.73
NUP58-208ENST00000466694 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
NUP58-208ENST00000466694 BPY2O14599 106 aa10.47□□□□□ -0.73
NUP58-208ENST00000466694 CRYGAP11844 174 aa10.47□□□□□ -0.73
NUP58-208ENST00000466694 IGFL1Q6UW32 110 aa10.47□□□□□ -0.73
NUP58-208ENST00000466694 FAT2Q9NYQ8 4349 aa10.45□□□□□ -0.74
NUP58-208ENST00000466694 IGLV5-52A0A0A0MRZ9 124 aa10.44□□□□□ -0.74
NUP58-208ENST00000466694 PLAC8Q9NZF1 115 aa10.44□□□□□ -0.74
NUP58-208ENST00000466694 IGKV4-1P06312 121 aa10.43□□□□□ -0.74
NUP58-208ENST00000466694 DNAH5Q8TE73 4624 aa10.43□□□□□ -0.74
NUP58-208ENST00000466694 SMIM20Q8N5G0 67 aa10.42□□□□□ -0.74
NUP58-208ENST00000466694 Q8N9L7 120 aa10.4□□□□□ -0.74
NUP58-208ENST00000466694 SS18L2Q9UHA2 77 aa10.4□□□□□ -0.74
NUP58-208ENST00000466694 A0A0G2JQZ4 141 aa10.4□□□□□ -0.75
NUP58-208ENST00000466694 TRAV7A0A075B6U4 112 aa10.39□□□□□ -0.75
NUP58-208ENST00000466694 DNAH8Q96JB1 4490 aa10.37□□□□□ -0.75
NUP58-208ENST00000466694 PKD1P98161 4303 aa10.37□□□□□ -0.75
NUP58-208ENST00000466694 PSORS1C2Q9UIG4 136 aa10.36□□□□□ -0.75
NUP58-208ENST00000466694 A0A087WSZ3 146 aa10.34□□□□□ -0.75
NUP58-208ENST00000466694 DSCR10P59022 87 aa10.33□□□□□ -0.76
NUP58-208ENST00000466694 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
NUP58-208ENST00000466694 ZNF706Q9Y5V0 76 aaPredicted RBP10.32□□□□□ -0.76
NUP58-208ENST00000466694 LCE6AA0A183 80 aa10.31□□□□□ -0.76
NUP58-208ENST00000466694 KRTAP10-2P60368 255 aa10.31□□□□□ -0.76
NUP58-208ENST00000466694 CYSTM1Q9H1C7 97 aa10.31□□□□□ -0.76
NUP58-208ENST00000466694 ZNF861PO60384 105 aa10.3□□□□□ -0.76
NUP58-208ENST00000466694 SRRM2Q9UQ35 2752 aaKnown RBP10.29□□□□□ -0.76
NUP58-208ENST00000466694 K7EQZ3 153 aa10.27□□□□□ -0.77
NUP58-208ENST00000466694 C20orf197Q8N268 126 aa10.27□□□□□ -0.77
NUP58-208ENST00000466694 RPL37AP61513 92 aaKnown RBP10.26□□□□□ -0.77
NUP58-208ENST00000466694 RYR2Q92736 4967 aa10.26□□□□□ -0.77
NUP58-208ENST00000466694 KMT2CQ8NEZ4 4911 aaKnown RBP10.24□□□□□ -0.77
NUP58-208ENST00000466694 IGLV9-49A0A0B4J1Y8 123 aa10.24□□□□□ -0.77
NUP58-208ENST00000466694 OCR1Q9BZK8 76 aa10.24□□□□□ -0.77
NUP58-208ENST00000466694 TMEM258P61165 79 aa10.23□□□□□ -0.77
NUP58-208ENST00000466694 IGLV7-43P04211 117 aa10.22□□□□□ -0.77
NUP58-208ENST00000466694 KLKP1Q107X0 134 aa10.22□□□□□ -0.77
NUP58-208ENST00000466694 DEFB116Q30KQ4 102 aa10.22□□□□□ -0.77
NUP58-208ENST00000466694 FAM30AQ9NZY2 134 aa10.22□□□□□ -0.77
NUP58-208ENST00000466694 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.78
NUP58-208ENST00000466694 LINC00472Q9H8W2 130 aa10.21□□□□□ -0.78
NUP58-208ENST00000466694 HCG22E2RYF7 251 aa10.19□□□□□ -0.78
NUP58-208ENST00000466694 Q6ZSA8 131 aa10.19□□□□□ -0.78
NUP58-208ENST00000466694 PKHD1P08F94 4074 aa10.17□□□□□ -0.78
NUP58-208ENST00000466694 KRTAP10-1P60331 282 aa10.17□□□□□ -0.78
NUP58-208ENST00000466694 MOBPQ13875 183 aa10.16□□□□□ -0.78
NUP58-208ENST00000466694 LINC00336Q6ZUF6 198 aa10.15□□□□□ -0.78
NUP58-208ENST00000466694 SNURFQ9Y675 71 aa10.15□□□□□ -0.78
NUP58-208ENST00000466694 A8MWP4 228 aa10.15□□□□□ -0.79
NUP58-208ENST00000466694 TMEM254Q8TBM7 123 aa10.15□□□□□ -0.79
NUP58-208ENST00000466694 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.79
NUP58-208ENST00000466694 J3KT08 172 aa10.14□□□□□ -0.79
NUP58-208ENST00000466694 LRP1BQ9NZR2 4599 aa10.13□□□□□ -0.79
NUP58-208ENST00000466694 H7BZZ5 65 aa10.13□□□□□ -0.79
NUP58-208ENST00000466694 PRR15Q8IV56 129 aa10.13□□□□□ -0.79
NUP58-208ENST00000466694 NDUFC1O43677 76 aa10.11□□□□□ -0.79
NUP58-208ENST00000466694 HRCT1Q6UXD1 115 aa10.1□□□□□ -0.79
NUP58-208ENST00000466694 DYNC1H1Q14204 4646 aaKnown RBP10.1□□□□□ -0.79
NUP58-208ENST00000466694 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
NUP58-208ENST00000466694 A0A1B0GVY2 172 aa10.09□□□□□ -0.79
NUP58-208ENST00000466694 Q96NJ1 140 aa10.09□□□□□ -0.79
NUP58-208ENST00000466694 KRTAP29-1A8MX34 341 aaPredicted RBP10.08□□□□□ -0.8
NUP58-208ENST00000466694 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
NUP58-208ENST00000466694 RPS28P62857 69 aaKnown RBP10.06□□□□□ -0.8
NUP58-208ENST00000466694 FAM236DA0A1B0GTK5 79 aa10.05□□□□□ -0.8
NUP58-208ENST00000466694 NDUFB1O75438 58 aa10.05□□□□□ -0.8
NUP58-208ENST00000466694 FAM236CP0DP71 79 aa10.05□□□□□ -0.8
NUP58-208ENST00000466694 CASC2Q6XLA1 102 aa10.05□□□□□ -0.8
NUP58-208ENST00000466694 C5orf47Q569G3 176 aa10.02□□□□□ -0.8
NUP58-208ENST00000466694 SSBP3-AS1Q7Z2R9 100 aa10.02□□□□□ -0.8
NUP58-208ENST00000466694 RYR3Q15413 4870 aa10.02□□□□□ -0.81
NUP58-208ENST00000466694 CD164Q04900 197 aa10.01□□□□□ -0.81
NUP58-208ENST00000466694 MMP24-AS1A0A0U1RRL7 71 aa10□□□□□ -0.81
NUP58-208ENST00000466694 APOBP04114 4563 aaKnown RBP9.99□□□□□ -0.81
NUP58-208ENST00000466694 VPS13BQ7Z7G8 4022 aa9.98□□□□□ -0.81
NUP58-208ENST00000466694 ATP5EP56381 51 aaPredicted RBP9.97□□□□□ -0.81
NUP58-208ENST00000466694 FAM229BQ4G0N7 80 aa9.96□□□□□ -0.81
NUP58-208ENST00000466694 ZCCHC13Q8WW36 166 aaKnown RBP9.96□□□□□ -0.81
NUP58-208ENST00000466694 A0A1B0GVX0 72 aa9.95□□□□□ -0.82
NUP58-208ENST00000466694 hDV103S1A0JD37 113 aa9.95□□□□□ -0.82
NUP58-208ENST00000466694 CDK2AP2O75956 126 aa9.95□□□□□ -0.82
NUP58-208ENST00000466694 ASB16-AS1Q495Z4 193 aa9.94□□□□□ -0.82
NUP58-208ENST00000466694 C8orf17Q9NRJ1 99 aa9.93□□□□□ -0.82
NUP58-208ENST00000466694 A0A087X002 238 aa9.93□□□□□ -0.82
NUP58-208ENST00000466694 MP68P56378 58 aa9.92□□□□□ -0.82
NUP58-208ENST00000466694 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms