RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 C20orf197Q8N268 126 aa9.16□□□□□ -0.94
HDAC6-213ENST00000462730 HECTD4Q9Y4D8 3996 aa9.16□□□□□ -0.94
HDAC6-213ENST00000462730 REG3GQ6UW15 175 aa9.15□□□□□ -0.94
HDAC6-213ENST00000462730 FRAS1Q86XX4 4008 aa9.15□□□□□ -0.94
HDAC6-213ENST00000462730 DHRS4-AS1Q9P1J3 65 aa9.15□□□□□ -0.95
HDAC6-213ENST00000462730 SMIM26A0A096LP01 95 aa9.14□□□□□ -0.95
HDAC6-213ENST00000462730 ERC2-IT1O76042 136 aa9.14□□□□□ -0.95
HDAC6-213ENST00000462730 HAMPP81172 84 aa9.14□□□□□ -0.95
HDAC6-213ENST00000462730 C1orf195Q5TG92 126 aa9.14□□□□□ -0.95
HDAC6-213ENST00000462730 H7BZZ5 65 aa9.13□□□□□ -0.95
HDAC6-213ENST00000462730 FUSP35637 526 aaKnown RBP eCLIP9.13□□□□□ -0.95
HDAC6-213ENST00000462730 Q9BRP9 147 aa9.13□□□□□ -0.95
HDAC6-213ENST00000462730 RTL8CO15255 209 aa9.12□□□□□ -0.95
HDAC6-213ENST00000462730 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
HDAC6-213ENST00000462730 LINC00474Q9P2X8 69 aa9.12□□□□□ -0.95
HDAC6-213ENST00000462730 TRBV7-4A0A0J9YYF1 115 aa9.12□□□□□ -0.95
HDAC6-213ENST00000462730 TNP2Q05952 138 aa9.12□□□□□ -0.95
HDAC6-213ENST00000462730 SACSQ9NZJ4 4579 aa9.11□□□□□ -0.95
HDAC6-213ENST00000462730 PANO1I0J062 215 aa9.11□□□□□ -0.95
HDAC6-213ENST00000462730 UBE2BP63146 152 aa9.1□□□□□ -0.95
HDAC6-213ENST00000462730 DEFB105AQ8NG35 78 aa9.1□□□□□ -0.95
HDAC6-213ENST00000462730 IGLV5-52A0A0A0MRZ9 124 aa9.08□□□□□ -0.96
HDAC6-213ENST00000462730 SPACA4Q8TDM5 124 aa9.08□□□□□ -0.96
HDAC6-213ENST00000462730 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.08□□□□□ -0.96
HDAC6-213ENST00000462730 KRTAP11-1Q8IUC1 163 aa9.07□□□□□ -0.96
HDAC6-213ENST00000462730 Q8N377 158 aa9.07□□□□□ -0.96
HDAC6-213ENST00000462730 FAT2Q9NYQ8 4349 aa9.07□□□□□ -0.96
HDAC6-213ENST00000462730 ST20-AS1Q8NBB2 130 aa9.06□□□□□ -0.96
HDAC6-213ENST00000462730 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
HDAC6-213ENST00000462730 PRLHP81277 87 aa9.06□□□□□ -0.96
HDAC6-213ENST00000462730 DNAH5Q8TE73 4624 aa9.06□□□□□ -0.96
HDAC6-213ENST00000462730 FP248Q71RG6 208 aaPredicted RBP9.04□□□□□ -0.96
HDAC6-213ENST00000462730 SCXQ7RTU7 201 aa9.04□□□□□ -0.96
HDAC6-213ENST00000462730 IGLV5-48A0A075B6I7 105 aa9.03□□□□□ -0.96
HDAC6-213ENST00000462730 LCE6AA0A183 80 aa9.03□□□□□ -0.96
HDAC6-213ENST00000462730 A0A1B0GW54 56 aa9.03□□□□□ -0.96
HDAC6-213ENST00000462730 KRTAP10-2P60368 255 aa9.01□□□□□ -0.97
HDAC6-213ENST00000462730 F8WEM9 126 aa9.01□□□□□ -0.97
HDAC6-213ENST00000462730 HIGD2AQ9BW72 106 aa9.01□□□□□ -0.97
HDAC6-213ENST00000462730 NREPQ16612 68 aa8.99□□□□□ -0.97
HDAC6-213ENST00000462730 PKD1P98161 4303 aa8.99□□□□□ -0.97
HDAC6-213ENST00000462730 UBE2AP49459 152 aa8.99□□□□□ -0.97
HDAC6-213ENST00000462730 SNURFQ9Y675 71 aa8.99□□□□□ -0.97
HDAC6-213ENST00000462730 DNAH8Q96JB1 4490 aa8.98□□□□□ -0.97
HDAC6-213ENST00000462730 H0Y9J4 135 aa8.97□□□□□ -0.97
HDAC6-213ENST00000462730 BRK1Q8WUW1 75 aa8.97□□□□□ -0.97
HDAC6-213ENST00000462730 TMEM254Q8TBM7 123 aa8.97□□□□□ -0.97
HDAC6-213ENST00000462730 BPY2O14599 106 aa8.96□□□□□ -0.98
HDAC6-213ENST00000462730 PLAC8Q9NZF1 115 aa8.95□□□□□ -0.98
HDAC6-213ENST00000462730 KMT2CQ8NEZ4 4911 aaKnown RBP8.95□□□□□ -0.98
HDAC6-213ENST00000462730 RYR2Q92736 4967 aa8.94□□□□□ -0.98
HDAC6-213ENST00000462730 IGKV4-1P06312 121 aa8.93□□□□□ -0.98
HDAC6-213ENST00000462730 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
HDAC6-213ENST00000462730 Q8N9L7 120 aa8.93□□□□□ -0.98
HDAC6-213ENST00000462730 KRTAP13-1Q8IUC0 172 aa8.92□□□□□ -0.98
HDAC6-213ENST00000462730 C1orf137Q5JT78 98 aa8.92□□□□□ -0.98
HDAC6-213ENST00000462730 A0A0U1RQV1 116 aa8.91□□□□□ -0.98
HDAC6-213ENST00000462730 PMAIP1Q13794 54 aa8.9□□□□□ -0.98
HDAC6-213ENST00000462730 PRR15Q8IV56 129 aa8.9□□□□□ -0.98
HDAC6-213ENST00000462730 OCR1Q9BZK8 76 aa8.9□□□□□ -0.99
HDAC6-213ENST00000462730 FAM30AQ9NZY2 134 aa8.9□□□□□ -0.99
HDAC6-213ENST00000462730 PSORS1C2Q9UIG4 136 aa8.89□□□□□ -0.99
HDAC6-213ENST00000462730 A0A1W2PNM2 257 aa8.88□□□□□ -0.99
HDAC6-213ENST00000462730 KRTAP10-1P60331 282 aa8.88□□□□□ -0.99
HDAC6-213ENST00000462730 SPRR1BP22528 89 aa8.87□□□□□ -0.99
HDAC6-213ENST00000462730 Q6ZSA8 131 aa8.86□□□□□ -0.99
HDAC6-213ENST00000462730 Q8NBF4 154 aa8.86□□□□□ -0.99
HDAC6-213ENST00000462730 CD164Q04900 197 aa8.86□□□□□ -0.99
HDAC6-213ENST00000462730 CIRBP-AS1Q8TBR5 109 aa8.86□□□□□ -0.99
HDAC6-213ENST00000462730 PKHD1P08F94 4074 aa8.84□□□□□ -0.99
HDAC6-213ENST00000462730 IGLV8-61A0A075B6I0 122 aa8.84□□□□□ -0.99
HDAC6-213ENST00000462730 IGFL1Q6UW32 110 aa8.84□□□□□ -0.99
HDAC6-213ENST00000462730 A0A0G2JQZ4 141 aa8.83□□□□□ -1
HDAC6-213ENST00000462730 SPRR4Q96PI1 79 aa8.81□□□□□ -1
HDAC6-213ENST00000462730 LRP1BQ9NZR2 4599 aa8.81□□□□□ -1
HDAC6-213ENST00000462730 SRRM2Q9UQ35 2752 aaKnown RBP8.81□□□□□ -1
HDAC6-213ENST00000462730 A0A1B0GVY2 172 aa8.8□□□□□ -1
HDAC6-213ENST00000462730 ZNF861PO60384 105 aa8.8□□□□□ -1
HDAC6-213ENST00000462730 ZNF706Q9Y5V0 76 aaPredicted RBP8.79□□□□□ -1
HDAC6-213ENST00000462730 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
HDAC6-213ENST00000462730 DYNC1H1Q14204 4646 aaKnown RBP8.76□□□□□ -1.01
HDAC6-213ENST00000462730 LINC00483Q53H64 154 aa8.76□□□□□ -1.01
HDAC6-213ENST00000462730 RYR3Q15413 4870 aa8.76□□□□□ -1.01
HDAC6-213ENST00000462730 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
HDAC6-213ENST00000462730 NDUFB1O75438 58 aa8.73□□□□□ -1.01
HDAC6-213ENST00000462730 hDV103S1A0JD37 113 aa8.73□□□□□ -1.01
HDAC6-213ENST00000462730 DSCR10P59022 87 aa8.73□□□□□ -1.01
HDAC6-213ENST00000462730 Q1T7F1 81 aa8.73□□□□□ -1.01
HDAC6-213ENST00000462730 ZCCHC13Q8WW36 166 aaKnown RBP8.72□□□□□ -1.01
HDAC6-213ENST00000462730 CYP4F30PQ9H0H9 118 aa8.72□□□□□ -1.01
HDAC6-213ENST00000462730 A0A087WSZ3 146 aa8.72□□□□□ -1.01
HDAC6-213ENST00000462730 FAM229BQ4G0N7 80 aa8.72□□□□□ -1.01
HDAC6-213ENST00000462730 K7EQZ3 153 aa8.71□□□□□ -1.02
HDAC6-213ENST00000462730 MPLKIPQ8TAP9 179 aa8.71□□□□□ -1.02
HDAC6-213ENST00000462730 ANAPC11Q9NYG5 84 aa8.71□□□□□ -1.02
HDAC6-213ENST00000462730 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
HDAC6-213ENST00000462730 MOBPQ13875 183 aa8.67□□□□□ -1.02
HDAC6-213ENST00000462730 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
HDAC6-213ENST00000462730 RPL37AP61513 92 aaKnown RBP8.66□□□□□ -1.02
HDAC6-213ENST00000462730 HCG22E2RYF7 251 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms