RNA–Protein interactions for RNA: ENST00000461801.1

FXR1-205, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 410 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-205ENST00000461801 LAMA1P25391 3075 aa-0.16□□□□□ -2.44
FXR1-205ENST00000461801 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.17□□□□□ -2.44
FXR1-205ENST00000461801 USP9XQ93008 2570 aaPredicted RBP-0.17□□□□□ -2.44
FXR1-205ENST00000461801 NDUFA4O00483 81 aa-0.17□□□□□ -2.44
FXR1-205ENST00000461801 MAP1BP46821 2468 aaKnown RBP-0.17□□□□□ -2.44
FXR1-205ENST00000461801 DOPEY1Q5JWR5 2465 aa-0.17□□□□□ -2.44
FXR1-205ENST00000461801 STARD9Q9P2P6 4700 aa-0.17□□□□□ -2.44
FXR1-205ENST00000461801 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
FXR1-205ENST00000461801 MYO18BQ8IUG5 2567 aa-0.17□□□□□ -2.44
FXR1-205ENST00000461801 LAMA5O15230 3695 aa-0.18□□□□□ -2.44
FXR1-205ENST00000461801 LRP1BQ9NZR2 4599 aa-0.18□□□□□ -2.44
FXR1-205ENST00000461801 ACANP16112 2415 aa-0.18□□□□□ -2.44
FXR1-205ENST00000461801 RRBP1Q9P2E9 1410 aaKnown RBP-0.18□□□□□ -2.44
FXR1-205ENST00000461801 HMGA1P17096 107 aaKnown RBP-0.18□□□□□ -2.44
FXR1-205ENST00000461801 PRO3102Q9H379 93 aa-0.18□□□□□ -2.44
FXR1-205ENST00000461801 RIF1Q5UIP0 2472 aaKnown RBP-0.18□□□□□ -2.44
FXR1-205ENST00000461801 ITPR3Q14573 2671 aa-0.18□□□□□ -2.44
FXR1-205ENST00000461801 ZFHX4Q86UP3 3567 aa-0.19□□□□□ -2.44
FXR1-205ENST00000461801 UNC80Q8N2C7 3258 aa-0.19□□□□□ -2.44
FXR1-205ENST00000461801 MYO15AQ9UKN7 3530 aa-0.19□□□□□ -2.44
FXR1-205ENST00000461801 CCDC168Q8NDH2 2452 aa-0.2□□□□□ -2.44
FXR1-205ENST00000461801 CICQ96RK0 1608 aaPredicted RBP-0.2□□□□□ -2.44
FXR1-205ENST00000461801 WNK1Q9H4A3 2382 aa-0.2□□□□□ -2.44
FXR1-205ENST00000461801 MUC3AQ02505 3323 aa-0.2□□□□□ -2.44
FXR1-205ENST00000461801 KRTAP6-1Q3LI64 71 aa-0.2□□□□□ -2.44
FXR1-205ENST00000461801 USP9YO00507 2555 aaPredicted RBP-0.2□□□□□ -2.44
FXR1-205ENST00000461801 MAP1AP78559 2803 aaPredicted RBP-0.2□□□□□ -2.44
FXR1-205ENST00000461801 C3orf79P0CE67 100 aa-0.21□□□□□ -2.44
FXR1-205ENST00000461801 LINC00158P58513 81 aa-0.21□□□□□ -2.44
FXR1-205ENST00000461801 CFAP74Q9C0B2 1584 aa-0.21□□□□□ -2.44
FXR1-205ENST00000461801 DCHS1Q96JQ0 3298 aa-0.21□□□□□ -2.44
FXR1-205ENST00000461801 CCDC88BA6NC98 1476 aa-0.22□□□□□ -2.44
FXR1-205ENST00000461801 GCN1Q92616 2671 aaKnown RBP-0.22□□□□□ -2.44
FXR1-205ENST00000461801 BOD1L1Q8NFC6 3051 aa-0.22□□□□□ -2.44
FXR1-205ENST00000461801 KRTAP19-6Q3LI70 58 aa-0.22□□□□□ -2.44
FXR1-205ENST00000461801 ARFGEF2Q9Y6D5 1785 aa-0.22□□□□□ -2.45
FXR1-205ENST00000461801 KALRNO60229 2985 aa-0.22□□□□□ -2.45
FXR1-205ENST00000461801 MGAM2Q2M2H8 2515 aa-0.23□□□□□ -2.45
FXR1-205ENST00000461801 DEFA5Q01523 94 aa-0.23□□□□□ -2.45
FXR1-205ENST00000461801 APC2O95996 2303 aa-0.23□□□□□ -2.45
FXR1-205ENST00000461801 WDR87Q6ZQQ6 2873 aa-0.23□□□□□ -2.45
FXR1-205ENST00000461801 ANKARQ7Z5J8 1434 aa-0.23□□□□□ -2.45
FXR1-205ENST00000461801 ITPR2Q14571 2701 aa-0.23□□□□□ -2.45
FXR1-205ENST00000461801 NBPF19A0A087WUL8 3843 aa-0.24□□□□□ -2.45
FXR1-205ENST00000461801 FAT1Q14517 4588 aa-0.24□□□□□ -2.45
FXR1-205ENST00000461801 LYSTQ99698 3801 aa-0.24□□□□□ -2.45
FXR1-205ENST00000461801 ACACBO00763 2458 aa-0.24□□□□□ -2.45
FXR1-205ENST00000461801 NESP48681 1621 aa-0.24□□□□□ -2.45
FXR1-205ENST00000461801 SRCAPQ6ZRS2 3230 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 SVEP1Q4LDE5 3571 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 MT4P47944 62 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 C4AP0C0L4 1744 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 C4BP0C0L5 1744 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 TIAM2Q8IVF5 1701 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 REV3LO60673 3130 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 EP400Q96L91 3159 aa-0.25□□□□□ -2.45
FXR1-205ENST00000461801 NBEAL1Q6ZS30 2694 aa-0.26□□□□□ -2.45
FXR1-205ENST00000461801 CEP295Q9C0D2 2601 aa-0.26□□□□□ -2.45
FXR1-205ENST00000461801 CD163L1Q9NR16 1453 aa-0.26□□□□□ -2.45
FXR1-205ENST00000461801 CUBNO60494 3623 aa-0.26□□□□□ -2.45
FXR1-205ENST00000461801 CFAP46Q8IYW2 2715 aa-0.26□□□□□ -2.45
FXR1-205ENST00000461801 NIPBLQ6KC79 2804 aaeCLIP-0.27□□□□□ -2.45
FXR1-205ENST00000461801 UTP20O75691 2785 aaKnown RBP-0.27□□□□□ -2.45
FXR1-205ENST00000461801 SCRIBQ14160 1630 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 PTPN23Q9H3S7 1636 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 ADAMTS12P58397 1594 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 SPEGQ15772 3267 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 KNL1Q8NG31 2342 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 H0YAA0 97 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 TEX15Q9BXT5 2789 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 MKI67P46013 3256 aaKnown RBP-0.27□□□□□ -2.45
FXR1-205ENST00000461801 LRRK2Q5S007 2527 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 NBEAQ8NFP9 2946 aa-0.27□□□□□ -2.45
FXR1-205ENST00000461801 RELNP78509 3460 aa-0.28□□□□□ -2.45
FXR1-205ENST00000461801 CSMD2Q7Z408 3487 aa-0.28□□□□□ -2.45
FXR1-205ENST00000461801 CNOT1A5YKK6 2376 aaKnown RBP-0.28□□□□□ -2.45
FXR1-205ENST00000461801 KRTAP20-2Q3LI61 65 aa-0.28□□□□□ -2.45
FXR1-205ENST00000461801 A0A0C4DFX4 3053 aa-0.28□□□□□ -2.45
FXR1-205ENST00000461801 TACC2O95359 2948 aa-0.28□□□□□ -2.45
FXR1-205ENST00000461801 DNAH7Q8WXX0 4024 aa-0.29□□□□□ -2.46
FXR1-205ENST00000461801 EPG5Q9HCE0 2579 aa-0.29□□□□□ -2.46
FXR1-205ENST00000461801 FLNBO75369 2602 aaKnown RBP-0.3□□□□□ -2.46
FXR1-205ENST00000461801 EYSQ5T1H1 3165 aa-0.3□□□□□ -2.46
FXR1-205ENST00000461801 FLGP20930 4061 aaPredicted RBP-0.3□□□□□ -2.46
FXR1-205ENST00000461801 H0YGG7 62 aa-0.3□□□□□ -2.46
FXR1-205ENST00000461801 DYNC1H1Q14204 4646 aaKnown RBP-0.31□□□□□ -2.46
FXR1-205ENST00000461801 NF1P21359 2839 aa-0.31□□□□□ -2.46
FXR1-205ENST00000461801 PCNX1Q96RV3 2341 aa-0.31□□□□□ -2.46
FXR1-205ENST00000461801 DCHS2Q6V1P9 2916 aa-0.31□□□□□ -2.46
FXR1-205ENST00000461801 SZT2Q5T011 3432 aa-0.31□□□□□ -2.46
FXR1-205ENST00000461801 ANKRD50Q9ULJ7 1429 aa-0.31□□□□□ -2.46
FXR1-205ENST00000461801 PKD1P98161 4303 aa-0.32□□□□□ -2.46
FXR1-205ENST00000461801 LRBAP50851 2863 aa-0.32□□□□□ -2.46
FXR1-205ENST00000461801 H3BVH4 76 aa-0.32□□□□□ -2.46
FXR1-205ENST00000461801 ABCA8O94911 1581 aa-0.32□□□□□ -2.46
FXR1-205ENST00000461801 MAP3K1Q13233 1512 aa-0.33□□□□□ -2.46
FXR1-205ENST00000461801 WIZO95785 1651 aa-0.33□□□□□ -2.46
FXR1-205ENST00000461801 DMXL2Q8TDJ6 3036 aa-0.33□□□□□ -2.46
FXR1-205ENST00000461801 PLXNC1O60486 1568 aa-0.33□□□□□ -2.46
FXR1-205ENST00000461801 TRIOO75962 3097 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms