RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507		K7ERJ3	54 aa		7.25	□□□□□ -1.25
FDPS-204	ENST00000461507	IGLV5-48	A0A075B6I7	105 aa		7.24	□□□□□ -1.25
FDPS-204	ENST00000461507	IGLV7-46	A0A075B6I9	117 aa		7.24	□□□□□ -1.25
FDPS-204	ENST00000461507	PSMB2	P49721	201 aa		7.24	□□□□□ -1.25
FDPS-204	ENST00000461507	LINC01547	P58512	204 aa	Predicted RBP	7.24	□□□□□ -1.25
FDPS-204	ENST00000461507		Q8N377	158 aa		7.23	□□□□□ -1.25
FDPS-204	ENST00000461507		H0YGX0	51 aa		7.22	□□□□□ -1.25
FDPS-204	ENST00000461507	SMIM6	P0DI80	62 aa		7.22	□□□□□ -1.25
FDPS-204	ENST00000461507	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.22	□□□□□ -1.25
FDPS-204	ENST00000461507	SMIM29	Q86T20	159 aa		7.22	□□□□□ -1.25
FDPS-204	ENST00000461507	LIMD2	Q9BT23	127 aa		7.21	□□□□□ -1.26
FDPS-204	ENST00000461507		A0A0G2JQZ4	141 aa		7.2	□□□□□ -1.26
FDPS-204	ENST00000461507	TRIAP1	O43715	76 aa		7.2	□□□□□ -1.26
FDPS-204	ENST00000461507	LCE2A	Q5TA79	106 aa	Predicted RBP	7.2	□□□□□ -1.26
FDPS-204	ENST00000461507	SNHG12	Q9BXW3	62 aa		7.2	□□□□□ -1.26
FDPS-204	ENST00000461507	CDIP1	Q9H305	208 aa		7.2	□□□□□ -1.26
FDPS-204	ENST00000461507	RPS29	P62273	56 aa	Known RBP	7.19	□□□□□ -1.26
FDPS-204	ENST00000461507	FP248	Q71RG6	208 aa	Predicted RBP	7.19	□□□□□ -1.26
FDPS-204	ENST00000461507	FAM218A	Q96MZ4	157 aa		7.19	□□□□□ -1.26
FDPS-204	ENST00000461507	CLEC2B	Q92478	149 aa		7.18	□□□□□ -1.26
FDPS-204	ENST00000461507	DNAL4	O96015	105 aa		7.17	□□□□□ -1.26
FDPS-204	ENST00000461507	COX6C	P09669	75 aa		7.17	□□□□□ -1.26
FDPS-204	ENST00000461507		M0R143	59 aa		7.16	□□□□□ -1.26
FDPS-204	ENST00000461507	FABP2	P12104	132 aa		7.16	□□□□□ -1.26
FDPS-204	ENST00000461507	TSTD3	H0UI37	97 aa		7.15	□□□□□ -1.26
FDPS-204	ENST00000461507	SCGB1C2	P0DMR2	95 aa		7.15	□□□□□ -1.26
FDPS-204	ENST00000461507	OCIAD2	Q56VL3	154 aa		7.15	□□□□□ -1.26
FDPS-204	ENST00000461507	PPDPFL	Q8WWR9	84 aa		7.15	□□□□□ -1.26
FDPS-204	ENST00000461507		H3BUT2	72 aa		7.14	□□□□□ -1.27
FDPS-204	ENST00000461507	CD164	Q04900	197 aa		7.14	□□□□□ -1.27
FDPS-204	ENST00000461507	KRTAP13-3	Q3SY46	172 aa		7.14	□□□□□ -1.27
FDPS-204	ENST00000461507	LOC105371267	A0A1B0GV96	52 aa		7.13	□□□□□ -1.27
FDPS-204	ENST00000461507		A0A1B0GX51	115 aa		7.13	□□□□□ -1.27
FDPS-204	ENST00000461507	GHRH	P01286	108 aa		7.13	□□□□□ -1.27
FDPS-204	ENST00000461507		Q6JHZ5	121 aa		7.13	□□□□□ -1.27
FDPS-204	ENST00000461507		A0A1B0GV72	72 aa		7.12	□□□□□ -1.27
FDPS-204	ENST00000461507	BATF	Q16520	125 aa		7.12	□□□□□ -1.27
FDPS-204	ENST00000461507	IGFL1	Q6UW32	110 aa		7.12	□□□□□ -1.27
FDPS-204	ENST00000461507	TCL1B	O95988	128 aa		7.1	□□□□□ -1.27
FDPS-204	ENST00000461507	NDUFV3	P56181	108 aa	Known RBP	7.1	□□□□□ -1.27
FDPS-204	ENST00000461507	ORMDL1	Q9P0S3	153 aa		7.1	□□□□□ -1.27
FDPS-204	ENST00000461507	IGLV8-61	A0A075B6I0	122 aa		7.08	□□□□□ -1.28
FDPS-204	ENST00000461507		H3BMG7	143 aa		7.08	□□□□□ -1.28
FDPS-204	ENST00000461507	ASB16-AS1	Q495Z4	193 aa		7.08	□□□□□ -1.28
FDPS-204	ENST00000461507	NAA38	Q9BRA0	125 aa	Known RBP	7.08	□□□□□ -1.28
FDPS-204	ENST00000461507	KRTAP9-2	Q9BYQ4	174 aa		7.08	□□□□□ -1.28
FDPS-204	ENST00000461507	TRBV7-7	A0A0K0K1E9	115 aa		7.06	□□□□□ -1.28
FDPS-204	ENST00000461507	C9orf92	A6NGG3	77 aa		7.06	□□□□□ -1.28
FDPS-204	ENST00000461507	C1orf195	Q5TG92	126 aa		7.04	□□□□□ -1.28
FDPS-204	ENST00000461507		H3BQ85	93 aa		7.03	□□□□□ -1.28
FDPS-204	ENST00000461507	TMEM256-PLSCR3	K7ERE1	68 aa		7.03	□□□□□ -1.28
FDPS-204	ENST00000461507	LST1	O00453	97 aa		7.03	□□□□□ -1.28
FDPS-204	ENST00000461507		Q5XG85	94 aa		7.03	□□□□□ -1.28
FDPS-204	ENST00000461507	TRAC	P01848	142 aa		7.02	□□□□□ -1.29
FDPS-204	ENST00000461507	SEC61B	P60468	96 aa	Known RBP	7.01	□□□□□ -1.29
FDPS-204	ENST00000461507	ATXN8	Q156A1	80 aa		7.01	□□□□□ -1.29
FDPS-204	ENST00000461507	ANKRD29	Q8N6D5	301 aa		7.01	□□□□□ -1.29
FDPS-204	ENST00000461507	KRTAP4-1	Q9BYQ7	146 aa		7.01	□□□□□ -1.29
FDPS-204	ENST00000461507	XP32	Q5T750	250 aa		7	□□□□□ -1.29
FDPS-204	ENST00000461507	LYRM7	Q5U5X0	104 aa		7	□□□□□ -1.29
FDPS-204	ENST00000461507	TEN1	Q86WV5	123 aa		7	□□□□□ -1.29
FDPS-204	ENST00000461507	SS18L2	Q9UHA2	77 aa		7	□□□□□ -1.29
FDPS-204	ENST00000461507		A0A087WSZ3	146 aa		6.99	□□□□□ -1.29
FDPS-204	ENST00000461507	VPS25	Q9BRG1	176 aa		6.99	□□□□□ -1.29
FDPS-204	ENST00000461507	BAALC-AS2	P0C853	105 aa		6.97	□□□□□ -1.29
FDPS-204	ENST00000461507	UBE2V1	Q13404	147 aa		6.97	□□□□□ -1.29
FDPS-204	ENST00000461507		Q6Q795	121 aa		6.96	□□□□□ -1.3
FDPS-204	ENST00000461507		A0A1W2PNM2	257 aa		6.94	□□□□□ -1.3
FDPS-204	ENST00000461507	CCK	P06307	115 aa		6.94	□□□□□ -1.3
FDPS-204	ENST00000461507	RBM3	P98179	157 aa	Known RBP	6.94	□□□□□ -1.3
FDPS-204	ENST00000461507	DSCR8	Q96T75	97 aa		6.94	□□□□□ -1.3
FDPS-204	ENST00000461507	SIGMAR1	Q99720	223 aa		6.93	□□□□□ -1.3
FDPS-204	ENST00000461507	TRBV20-1	A0A075B6N2	111 aa		6.91	□□□□□ -1.3
FDPS-204	ENST00000461507	C9orf118	A6NHY6	69 aa		6.91	□□□□□ -1.3
FDPS-204	ENST00000461507		C9JAW5	83 aa		6.91	□□□□□ -1.3
FDPS-204	ENST00000461507	TRBV7-4	A0A0J9YYF1	115 aa		6.9	□□□□□ -1.3
FDPS-204	ENST00000461507	TAX1BP3	O14907	124 aa		6.9	□□□□□ -1.3
FDPS-204	ENST00000461507	OBSCN-AS1	Q96MR7	158 aa		6.89	□□□□□ -1.31
FDPS-204	ENST00000461507	KRTAP9-6	A0A140TA67	174 aa		6.88	□□□□□ -1.31
FDPS-204	ENST00000461507		A0A1W2PPM0	123 aa		6.88	□□□□□ -1.31
FDPS-204	ENST00000461507	PCP4L1	A6NKN8	68 aa		6.88	□□□□□ -1.31
FDPS-204	ENST00000461507	PCOTH	Q58A44	107 aa		6.88	□□□□□ -1.31
FDPS-204	ENST00000461507	LCE2C	Q5TA81	110 aa		6.88	□□□□□ -1.31
FDPS-204	ENST00000461507	JMJD7-PLA2G4B	H0Y9G9	81 aa		6.87	□□□□□ -1.31
FDPS-204	ENST00000461507	KRTAP19-2	Q3LHN2	52 aa		6.87	□□□□□ -1.31
FDPS-204	ENST00000461507	MTURN	Q8N3F0	131 aa		6.87	□□□□□ -1.31
FDPS-204	ENST00000461507	IGKV4-1	P06312	121 aa		6.86	□□□□□ -1.31
FDPS-204	ENST00000461507	DEFB116	Q30KQ4	102 aa		6.86	□□□□□ -1.31
FDPS-204	ENST00000461507		Q96NJ1	140 aa		6.85	□□□□□ -1.31
FDPS-204	ENST00000461507	RPL37	P61927	97 aa	Known RBP	6.84	□□□□□ -1.31
FDPS-204	ENST00000461507	COL5A1-AS1	Q5SY13	56 aa		6.84	□□□□□ -1.31
FDPS-204	ENST00000461507	C14orf132	Q9NPU4	83 aa		6.84	□□□□□ -1.31
FDPS-204	ENST00000461507	SPCS1	Q9Y6A9	102 aa		6.84	□□□□□ -1.31
FDPS-204	ENST00000461507	DSCR10	P59022	87 aa		6.83	□□□□□ -1.32
FDPS-204	ENST00000461507	LCE2D	Q5TA82	110 aa	Predicted RBP	6.83	□□□□□ -1.32
FDPS-204	ENST00000461507		H3BT86	120 aa		6.81	□□□□□ -1.32
FDPS-204	ENST00000461507	C21orf62-AS1	Q17RA5	79 aa		6.8	□□□□□ -1.32
FDPS-204	ENST00000461507		Q6ZQT0	140 aa		6.8	□□□□□ -1.32
FDPS-204	ENST00000461507	IGHV6-1	A0A0B4J1U7	121 aa		6.79	□□□□□ -1.32
FDPS-204	ENST00000461507	PDE6G	P18545	87 aa		6.79	□□□□□ -1.32

Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms