RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 PDE6GP18545 87 aa9.82□□□□□ -0.84
TMEM220-202ENST00000455996 XGP55808 180 aa9.82□□□□□ -0.84
TMEM220-202ENST00000455996 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
TMEM220-202ENST00000455996 A0A1B0GV72 72 aa9.81□□□□□ -0.84
TMEM220-202ENST00000455996 CCKP06307 115 aa9.81□□□□□ -0.84
TMEM220-202ENST00000455996 Q6ZQT0 140 aa9.81□□□□□ -0.84
TMEM220-202ENST00000455996 ACYP1P07311 99 aa9.8□□□□□ -0.84
TMEM220-202ENST00000455996 C21orf62-AS1Q17RA5 79 aa9.8□□□□□ -0.84
TMEM220-202ENST00000455996 SPRR4Q96PI1 79 aa9.8□□□□□ -0.84
TMEM220-202ENST00000455996 DSCR8Q96T75 97 aa9.8□□□□□ -0.84
TMEM220-202ENST00000455996 LINC00483Q53H64 154 aa9.79□□□□□ -0.84
TMEM220-202ENST00000455996 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
TMEM220-202ENST00000455996 ZNF706Q9Y5V0 76 aaPredicted RBP9.79□□□□□ -0.84
TMEM220-202ENST00000455996 IGLV8-61A0A075B6I0 122 aa9.77□□□□□ -0.85
TMEM220-202ENST00000455996 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
TMEM220-202ENST00000455996 CDIP1Q9H305 208 aa9.75□□□□□ -0.85
TMEM220-202ENST00000455996 F8WEM9 126 aa9.73□□□□□ -0.85
TMEM220-202ENST00000455996 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
TMEM220-202ENST00000455996 SRRM2Q9UQ35 2752 aaKnown RBP9.73□□□□□ -0.85
TMEM220-202ENST00000455996 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
TMEM220-202ENST00000455996 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
TMEM220-202ENST00000455996 A0A1B0GW54 56 aa9.68□□□□□ -0.86
TMEM220-202ENST00000455996 Q6JHZ5 121 aa9.68□□□□□ -0.86
TMEM220-202ENST00000455996 LINC00846Q9NV44 126 aa9.68□□□□□ -0.86
TMEM220-202ENST00000455996 A0A1W2PNM2 257 aa9.66□□□□□ -0.86
TMEM220-202ENST00000455996 IGFL1Q6UW32 110 aa9.66□□□□□ -0.86
TMEM220-202ENST00000455996 Q8NBF4 154 aa9.66□□□□□ -0.86
TMEM220-202ENST00000455996 FAT1Q14517 4588 aa9.66□□□□□ -0.86
TMEM220-202ENST00000455996 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.86
TMEM220-202ENST00000455996 CDK2AP2O75956 126 aa9.65□□□□□ -0.87
TMEM220-202ENST00000455996 SMR3BP02814 79 aaPredicted RBP9.65□□□□□ -0.87
TMEM220-202ENST00000455996 CRYGAP11844 174 aa9.63□□□□□ -0.87
TMEM220-202ENST00000455996 SPINK6Q6UWN8 80 aa9.63□□□□□ -0.87
TMEM220-202ENST00000455996 FAM229BQ4G0N7 80 aa9.62□□□□□ -0.87
TMEM220-202ENST00000455996 Q6Q795 121 aa9.62□□□□□ -0.87
TMEM220-202ENST00000455996 LINC00643Q86TS7 51 aa9.62□□□□□ -0.87
TMEM220-202ENST00000455996 ANAPC11Q9NYG5 84 aa9.62□□□□□ -0.87
TMEM220-202ENST00000455996 KRTAP1-4P0C5Y4 121 aa9.6□□□□□ -0.87
TMEM220-202ENST00000455996 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.87
TMEM220-202ENST00000455996 A0A0G2JQZ4 141 aa9.59□□□□□ -0.87
TMEM220-202ENST00000455996 SIGMAR1Q99720 223 aa9.59□□□□□ -0.87
TMEM220-202ENST00000455996 UBL5Q9BZL1 73 aa9.59□□□□□ -0.87
TMEM220-202ENST00000455996 HSPG2P98160 4391 aa9.59□□□□□ -0.87
TMEM220-202ENST00000455996 C9orf153Q5TBE3 101 aa9.58□□□□□ -0.88
TMEM220-202ENST00000455996 MT-ATP8P03928 68 aa9.57□□□□□ -0.88
TMEM220-202ENST00000455996 RYR1P21817 5038 aa9.57□□□□□ -0.88
TMEM220-202ENST00000455996 TRBV7-7A0A0K0K1E9 115 aa9.56□□□□□ -0.88
TMEM220-202ENST00000455996 MOBPQ13875 183 aa9.56□□□□□ -0.88
TMEM220-202ENST00000455996 Q6ZVQ6 151 aa9.56□□□□□ -0.88
TMEM220-202ENST00000455996 SSBP3-AS1Q7Z2R9 100 aa9.55□□□□□ -0.88
TMEM220-202ENST00000455996 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
TMEM220-202ENST00000455996 A0A087X002 238 aa9.53□□□□□ -0.88
TMEM220-202ENST00000455996 PLA2G1BP04054 148 aaKnown RBP9.53□□□□□ -0.88
TMEM220-202ENST00000455996 KRTAP13-2Q52LG2 175 aa9.53□□□□□ -0.88
TMEM220-202ENST00000455996 ATP5EP2Q5VTU8 51 aa9.53□□□□□ -0.88
TMEM220-202ENST00000455996 FAM229AH3BQW9 127 aa9.52□□□□□ -0.89
TMEM220-202ENST00000455996 PKHD1L1Q86WI1 4243 aa9.52□□□□□ -0.89
TMEM220-202ENST00000455996 NREPQ16612 68 aa9.5□□□□□ -0.89
TMEM220-202ENST00000455996 A0A087WSZ3 146 aa9.49□□□□□ -0.89
TMEM220-202ENST00000455996 CD164Q04900 197 aa9.48□□□□□ -0.89
TMEM220-202ENST00000455996 IMUPQ9GZP8 106 aa9.48□□□□□ -0.89
TMEM220-202ENST00000455996 CXCL6P80162 114 aa9.48□□□□□ -0.89
TMEM220-202ENST00000455996 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
TMEM220-202ENST00000455996 Q5VSD8 79 aa9.45□□□□□ -0.9
TMEM220-202ENST00000455996 KIAA1109Q2LD37 5005 aa9.42□□□□□ -0.9
TMEM220-202ENST00000455996 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
TMEM220-202ENST00000455996 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
TMEM220-202ENST00000455996 SS18L2Q9UHA2 77 aa9.41□□□□□ -0.9
TMEM220-202ENST00000455996 BPY2O14599 106 aa9.4□□□□□ -0.9
TMEM220-202ENST00000455996 HRCT1Q6UXD1 115 aa9.4□□□□□ -0.9
TMEM220-202ENST00000455996 Q8N1X5 172 aa9.4□□□□□ -0.9
TMEM220-202ENST00000455996 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.9
TMEM220-202ENST00000455996 SCGB1A1P11684 91 aa9.39□□□□□ -0.91
TMEM220-202ENST00000455996 Q5XG85 94 aa9.39□□□□□ -0.91
TMEM220-202ENST00000455996 PRR26Q8N8Z3 221 aa9.39□□□□□ -0.91
TMEM220-202ENST00000455996 BIRC6Q9NR09 4857 aa9.38□□□□□ -0.91
TMEM220-202ENST00000455996 ASB16-AS1Q495Z4 193 aa9.37□□□□□ -0.91
TMEM220-202ENST00000455996 DSCR10P59022 87 aa9.36□□□□□ -0.91
TMEM220-202ENST00000455996 Q96NJ1 140 aa9.36□□□□□ -0.91
TMEM220-202ENST00000455996 J3KT08 172 aa9.33□□□□□ -0.92
TMEM220-202ENST00000455996 HIST1H4AP62805 103 aaKnown RBP9.32□□□□□ -0.92
TMEM220-202ENST00000455996 LCE2CQ5TA81 110 aa9.32□□□□□ -0.92
TMEM220-202ENST00000455996 SPINK1P00995 79 aa9.31□□□□□ -0.92
TMEM220-202ENST00000455996 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
TMEM220-202ENST00000455996 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
TMEM220-202ENST00000455996 SPAG11AQ6PDA7 123 aa9.31□□□□□ -0.92
TMEM220-202ENST00000455996 A0A087WVE0 104 aa9.31□□□□□ -0.92
TMEM220-202ENST00000455996 LINC00304Q8N9R0 145 aa9.31□□□□□ -0.92
TMEM220-202ENST00000455996 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
TMEM220-202ENST00000455996 C4orf48Q5BLP8 95 aa9.3□□□□□ -0.92
TMEM220-202ENST00000455996 Q8N9L7 120 aa9.3□□□□□ -0.92
TMEM220-202ENST00000455996 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
TMEM220-202ENST00000455996 A8MWP4 228 aa9.27□□□□□ -0.93
TMEM220-202ENST00000455996 FAT3Q8TDW7 4589 aa9.27□□□□□ -0.93
TMEM220-202ENST00000455996 FAM236AA0A1B0GUQ0 79 aa9.26□□□□□ -0.93
TMEM220-202ENST00000455996 FAM236BA0A1B0GV22 79 aa9.26□□□□□ -0.93
TMEM220-202ENST00000455996 K7EQZ3 153 aa9.26□□□□□ -0.93
TMEM220-202ENST00000455996 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
TMEM220-202ENST00000455996 PRR15Q8IV56 129 aa9.25□□□□□ -0.93
TMEM220-202ENST00000455996 TNXBP22105 4242 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms