RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SYS1-DBNDD2H3BUS1 97 aa2.54□□□□□ -2
GTF3C3-208ENST00000455546 SPRR1BP22528 89 aa2.54□□□□□ -2
GTF3C3-208ENST00000455546 TAL2Q16559 108 aa2.54□□□□□ -2
GTF3C3-208ENST00000455546 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
GTF3C3-208ENST00000455546 LAMTOR3Q9UHA4 124 aa2.54□□□□□ -2
GTF3C3-208ENST00000455546 ZNF815PA8K554 130 aa2.53□□□□□ -2
GTF3C3-208ENST00000455546 COX7BP24311 80 aa2.53□□□□□ -2
GTF3C3-208ENST00000455546 MT1HP80294 61 aa2.53□□□□□ -2
GTF3C3-208ENST00000455546 C6orf99Q4VX62 202 aa2.53□□□□□ -2
GTF3C3-208ENST00000455546 SPANXCQ9NY87 97 aa2.53□□□□□ -2
GTF3C3-208ENST00000455546 DHRS4-AS1Q9P1J3 65 aa2.53□□□□□ -2
GTF3C3-208ENST00000455546 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
GTF3C3-208ENST00000455546 HIST1H2BKO60814 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 TIMM17BO60830 172 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BJP06899 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BOP23527 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BBP33778 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BDP58876 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 ELOF1P60002 83 aaKnown RBP2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BCP62807 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST2H2BEQ16778 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 LINC01545Q5VT33 79 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 SLC25A34Q6PIV7 304 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BHQ93079 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BNQ99877 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 HIST1H2BMQ99879 126 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 LIMD2Q9BT23 127 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 SPANXDQ9BXN6 97 aa2.52□□□□□ -2.01
GTF3C3-208ENST00000455546 TEX49A0A1B0GTD5 131 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 A6NDN8 102 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 C3orf79P0CE67 100 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 AKR1D1P51857 326 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 KRTDAPP60985 99 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 C1orf195Q5TG92 126 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 MUSTN1Q8IVN3 82 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 ATOH7Q8N100 152 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 PRO1933Q9H354 126 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 CBY1Q9Y3M2 126 aa2.51□□□□□ -2.01
GTF3C3-208ENST00000455546 CD164Q04900 197 aa2.5□□□□□ -2.01
GTF3C3-208ENST00000455546 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
GTF3C3-208ENST00000455546 SCGB1D4Q6XE38 83 aa2.5□□□□□ -2.01
GTF3C3-208ENST00000455546 PCP2Q8IVA1 136 aa2.5□□□□□ -2.01
GTF3C3-208ENST00000455546 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
GTF3C3-208ENST00000455546 A0A1B0GWB2 263 aa2.49□□□□□ -2.01
GTF3C3-208ENST00000455546 KRTAP10-6P60371 365 aaPredicted RBP2.49□□□□□ -2.01
GTF3C3-208ENST00000455546 SMIM11BQ8TCY0 68 aa2.49□□□□□ -2.01
GTF3C3-208ENST00000455546 IGLV5-48A0A075B6I7 105 aa2.48□□□□□ -2.01
GTF3C3-208ENST00000455546 TRBV7-6A0A0J9YX20 115 aa2.48□□□□□ -2.01
GTF3C3-208ENST00000455546 M0R2T5 61 aa2.48□□□□□ -2.01
GTF3C3-208ENST00000455546 RPL37P61927 97 aaKnown RBP2.48□□□□□ -2.01
GTF3C3-208ENST00000455546 Q5XG85 94 aa2.48□□□□□ -2.01
GTF3C3-208ENST00000455546 IFITM1P13164 125 aa2.47□□□□□ -2.01
GTF3C3-208ENST00000455546 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
GTF3C3-208ENST00000455546 TCL1BO95988 128 aa2.46□□□□□ -2.02
GTF3C3-208ENST00000455546 DSCR10P59022 87 aa2.46□□□□□ -2.02
GTF3C3-208ENST00000455546 COA6Q5JTJ3 125 aaKnown RBP2.46□□□□□ -2.02
GTF3C3-208ENST00000455546 Q6Q795 121 aa2.46□□□□□ -2.02
GTF3C3-208ENST00000455546 LINC00575Q6W349 94 aa2.46□□□□□ -2.02
GTF3C3-208ENST00000455546 TRAV13-2A0A0B4J235 113 aa2.45□□□□□ -2.02
GTF3C3-208ENST00000455546 hADV29S1A0JD25 119 aa2.45□□□□□ -2.02
GTF3C3-208ENST00000455546 C20orf202A1L168 122 aa2.45□□□□□ -2.02
GTF3C3-208ENST00000455546 IGFL1Q6UW32 110 aa2.45□□□□□ -2.02
GTF3C3-208ENST00000455546 Q6ZQY7 126 aa2.45□□□□□ -2.02
GTF3C3-208ENST00000455546 Q6ZVH6 145 aa2.45□□□□□ -2.02
GTF3C3-208ENST00000455546 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
GTF3C3-208ENST00000455546 TRBV7-7A0A0K0K1E9 115 aa2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 F8WEM9 126 aa2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 H3BUT2 72 aa2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 VAMP3Q15836 100 aa2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 OCIAD2Q56VL3 154 aa2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 OBSCN-AS1Q96MR7 158 aa2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 C12orf57Q99622 126 aa2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 NHP2Q9NX24 153 aaKnown RBP2.44□□□□□ -2.02
GTF3C3-208ENST00000455546 ATP11AUNQ6ZP68 121 aa2.43□□□□□ -2.02
GTF3C3-208ENST00000455546 Q96NJ1 140 aa2.43□□□□□ -2.02
GTF3C3-208ENST00000455546 SNHG12Q9BXW3 62 aa2.43□□□□□ -2.02
GTF3C3-208ENST00000455546 FLGP20930 4061 aaPredicted RBP2.42□□□□□ -2.02
GTF3C3-208ENST00000455546 Q6JHZ5 121 aa2.42□□□□□ -2.02
GTF3C3-208ENST00000455546 CLEC2BQ92478 149 aa2.42□□□□□ -2.02
GTF3C3-208ENST00000455546 HIST1H2BLQ99880 126 aa2.42□□□□□ -2.02
GTF3C3-208ENST00000455546 HSBP1L1C9JCN9 74 aa2.41□□□□□ -2.02
GTF3C3-208ENST00000455546 LST1O00453 97 aa2.41□□□□□ -2.02
GTF3C3-208ENST00000455546 S100A2P29034 98 aa2.41□□□□□ -2.02
GTF3C3-208ENST00000455546 CXCL6P80162 114 aa2.41□□□□□ -2.02
GTF3C3-208ENST00000455546 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.41□□□□□ -2.02
GTF3C3-208ENST00000455546 HIST3H2BBQ8N257 126 aa2.41□□□□□ -2.02
GTF3C3-208ENST00000455546 HIST1H4GQ99525 98 aa2.41□□□□□ -2.02
GTF3C3-208ENST00000455546 BVES-AS1Q5T3Y7 98 aa2.39□□□□□ -2.03
GTF3C3-208ENST00000455546 C14orf144Q96I85 54 aa2.39□□□□□ -2.03
GTF3C3-208ENST00000455546 A0A087WSZ3 146 aa2.38□□□□□ -2.03
GTF3C3-208ENST00000455546 COX8AP10176 69 aa2.38□□□□□ -2.03
GTF3C3-208ENST00000455546 KRTAP10-12P60413 245 aa2.38□□□□□ -2.03
GTF3C3-208ENST00000455546 TEN1Q86WV5 123 aa2.38□□□□□ -2.03
GTF3C3-208ENST00000455546 C20orf166-AS1Q96NR2 134 aa2.38□□□□□ -2.03
GTF3C3-208ENST00000455546 A0A1B0GV72 72 aa2.37□□□□□ -2.03
GTF3C3-208ENST00000455546 A8MUU9 505 aa2.37□□□□□ -2.03
GTF3C3-208ENST00000455546 H3BMG7 143 aa2.37□□□□□ -2.03
GTF3C3-208ENST00000455546 S100A6P06703 90 aa2.37□□□□□ -2.03
GTF3C3-208ENST00000455546 FABP2P12104 132 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms