RNA–Protein interactions for RNA: ENST00000449858.2

GAPDHP17-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 17, humanhuman

BASIC

Gene GAPDHP17, Length 1,001 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP17-201ENST00000449858 Q5VSD8 79 aa0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 NCBP2-AS2Q69YL0 99 aa0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 WFDC13Q8IUB5 93 aa0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 ANKARQ7Z5J8 1434 aa0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 DSPP15924 2871 aaKnown RBP0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 RYR2Q92736 4967 aa0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 DOPEY1Q5JWR5 2465 aa0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 A0A087WXM4 84 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 SPTY2D1-AS1A0A0U1RR47 76 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 KANTRA0A1W2PQU2 76 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 NBASA2RRP1 2371 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 UMAD1C9J7I0 102 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 I3L3M4 83 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 NDUFA4O00483 81 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 PDCD5O14737 125 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 ABCC6O95255 1503 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 IQGAP1P46940 1657 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 LRP1Q07954 4544 aaKnown RBP0□□□□□ -2.41
GAPDHP17-201ENST00000449858 HEPN1Q6WQI6 88 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 CCDC141Q6ZP82 1450 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 PREX2Q70Z35 1606 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 SETXQ7Z333 2677 aaKnown RBP0□□□□□ -2.41
GAPDHP17-201ENST00000449858 DDX60Q8IY21 1712 aaKnown RBP0□□□□□ -2.41
GAPDHP17-201ENST00000449858 THOC2Q8NI27 1593 aaKnown RBP0□□□□□ -2.41
GAPDHP17-201ENST00000449858 DUOX2Q9NRD8 1548 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 HECTD1Q9ULT8 2610 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 PRRC2CQ9Y520 2896 aaKnown RBP0□□□□□ -2.41
GAPDHP17-201ENST00000449858 U3KQA8 63 aa0□□□□□ -2.41
GAPDHP17-201ENST00000449858 ANK2Q01484 3957 aa-0□□□□□ -2.41
GAPDHP17-201ENST00000449858 BPTFQ12830 3046 aa-0□□□□□ -2.41
GAPDHP17-201ENST00000449858 TRANK1O15050 2925 aa-0□□□□□ -2.41
GAPDHP17-201ENST00000449858 HMCN2Q8NDA2 5059 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 BSNQ9UPA5 3926 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 LMO7Q8WWI1 1683 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 DEPDC5O75140 1603 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 NRXN3Q9Y4C0 1643 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 TIAM1Q13009 1591 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 UGGT1Q9NYU2 1555 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 EFCAB5A4FU69 1503 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 TENM2Q9NT68 2774 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 C3orf79P0CE67 100 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 SPRR2DP22532 72 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 IFI27P40305 119 aaPredicted RBP-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 SMIM11AP58511 58 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 KRTAP6-2Q3LI66 62 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 ENHOQ6UWT2 76 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 LYSTQ99698 3801 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 SMCO4Q9NRQ5 59 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 WNK1Q9H4A3 2382 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 RYR1P21817 5038 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 DCHS2Q6V1P9 2916 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 FLNBO75369 2602 aaKnown RBP-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 CHD8Q9HCK8 2581 aa-0.01□□□□□ -2.41
GAPDHP17-201ENST00000449858 SPTA1P02549 2419 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 PDE4DIPQ5VU43 2346 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 SPENQ96T58 3664 aaKnown RBP-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 CUBNO60494 3623 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 GCN1Q92616 2671 aaKnown RBP-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 LINC01549A6NIU2 74 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 SPINK1P00995 79 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 DEFB130BP0DP73 79 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 DEFB130AP0DP74 79 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 COX8AP10176 69 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 LINC00158P58513 81 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 ATP5EP2Q5VTU8 51 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 USMG5Q96IX5 58 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 KCNQ1DNQ9H478 68 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 CDKN2A-AS1Q9UH64 79 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 MGAM2Q2M2H8 2515 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 MAP1BP46821 2468 aaKnown RBP-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 DMXL1Q9Y485 3027 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 ZZEF1O43149 2961 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 PCNX1Q96RV3 2341 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 FAM208AQ9UK61 1670 aaKnown RBP-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 HSPG2P98160 4391 aa-0.02□□□□□ -2.41
GAPDHP17-201ENST00000449858 AGLP35573 1532 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 ZANQ9Y493 2812 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 ANKRD11Q6UB99 2663 aaPredicted RBP-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 M0R2T5 61 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 SPRR2GQ9BYE4 73 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 LRRK2Q5S007 2527 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 CEP290O15078 2479 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 FAT2Q9NYQ8 4349 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 ERICH3Q5RHP9 1530 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 KIAA0586Q9BVV6 1533 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 PRXQ9BXM0 1461 aa-0.03□□□□□ -2.41
GAPDHP17-201ENST00000449858 TACC2O95359 2948 aa-0.03□□□□□ -2.42
GAPDHP17-201ENST00000449858 ANKRD50Q9ULJ7 1429 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 NBEAL2Q6ZNJ1 2754 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 APC2O95996 2303 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 USP9XQ93008 2570 aaPredicted RBP-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 HYDINQ4G0P3 5121 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 NDUFB1O75438 58 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 SFTA3P0C7M3 94 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 SPRR2BP35325 72 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 RPS27P42677 84 aaKnown RBP-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 DEFB135Q30KP9 77 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 RPS27LQ71UM5 84 aaKnown RBP-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 A0A0C4DFX4 3053 aa-0.04□□□□□ -2.42
GAPDHP17-201ENST00000449858 NFAT5O94916 1531 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms