RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 HSD52Q0P140 79 aa8.3□□□□□ -1.08
HDAC4-204ENST00000446876 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
HDAC4-204ENST00000446876 PRO1854Q9UHT4 67 aa8.3□□□□□ -1.08
HDAC4-204ENST00000446876 MUC17Q685J3 4493 aa8.29□□□□□ -1.08
HDAC4-204ENST00000446876 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.29□□□□□ -1.08
HDAC4-204ENST00000446876 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
HDAC4-204ENST00000446876 LIMD2Q9BT23 127 aa8.29□□□□□ -1.08
HDAC4-204ENST00000446876 UQCR10Q9UDW1 63 aa8.29□□□□□ -1.08
HDAC4-204ENST00000446876 K7ERJ3 54 aa8.28□□□□□ -1.08
HDAC4-204ENST00000446876 CD164Q04900 197 aa8.28□□□□□ -1.08
HDAC4-204ENST00000446876 F8WEM9 126 aa8.27□□□□□ -1.09
HDAC4-204ENST00000446876 H0YGX0 51 aa8.24□□□□□ -1.09
HDAC4-204ENST00000446876 TRIAP1O43715 76 aa8.24□□□□□ -1.09
HDAC4-204ENST00000446876 MUC2Q02817 5179 aa8.23□□□□□ -1.09
HDAC4-204ENST00000446876 OCIAD2Q56VL3 154 aa8.22□□□□□ -1.09
HDAC4-204ENST00000446876 IGFL1Q6UW32 110 aa8.22□□□□□ -1.09
HDAC4-204ENST00000446876 SNHG12Q9BXW3 62 aa8.22□□□□□ -1.09
HDAC4-204ENST00000446876 IGLV8-61A0A075B6I0 122 aa8.21□□□□□ -1.1
HDAC4-204ENST00000446876 H3BUT2 72 aa8.21□□□□□ -1.1
HDAC4-204ENST00000446876 PPDPFLQ8WWR9 84 aa8.21□□□□□ -1.1
HDAC4-204ENST00000446876 CLEC2BQ92478 149 aa8.21□□□□□ -1.1
HDAC4-204ENST00000446876 SNCGO76070 127 aa8.19□□□□□ -1.1
HDAC4-204ENST00000446876 PSMB2P49721 201 aa8.19□□□□□ -1.1
HDAC4-204ENST00000446876 Q5XG85 94 aa8.19□□□□□ -1.1
HDAC4-204ENST00000446876 Q6JHZ5 121 aa8.19□□□□□ -1.1
HDAC4-204ENST00000446876 C1orf195Q5TG92 126 aa8.18□□□□□ -1.1
HDAC4-204ENST00000446876 C9orf92A6NGG3 77 aa8.17□□□□□ -1.1
HDAC4-204ENST00000446876 XP32Q5T750 250 aa8.17□□□□□ -1.1
HDAC4-204ENST00000446876 A0A1B0GX51 115 aa8.16□□□□□ -1.1
HDAC4-204ENST00000446876 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
HDAC4-204ENST00000446876 TRBV7-7A0A0K0K1E9 115 aa8.15□□□□□ -1.1
HDAC4-204ENST00000446876 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
HDAC4-204ENST00000446876 TCL1BO95988 128 aa8.14□□□□□ -1.11
HDAC4-204ENST00000446876 FABP2P12104 132 aa8.14□□□□□ -1.11
HDAC4-204ENST00000446876 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
HDAC4-204ENST00000446876 DNAL4O96015 105 aa8.11□□□□□ -1.11
HDAC4-204ENST00000446876 COX6CP09669 75 aa8.11□□□□□ -1.11
HDAC4-204ENST00000446876 A0A1B0GV72 72 aa8.1□□□□□ -1.11
HDAC4-204ENST00000446876 H3BMG7 143 aa8.1□□□□□ -1.11
HDAC4-204ENST00000446876 LOC105371267A0A1B0GV96 52 aa8.09□□□□□ -1.11
HDAC4-204ENST00000446876 SEC61BP60468 96 aaKnown RBP8.09□□□□□ -1.11
HDAC4-204ENST00000446876 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
HDAC4-204ENST00000446876 ORMDL1Q9P0S3 153 aa8.09□□□□□ -1.11
HDAC4-204ENST00000446876 GHRHP01286 108 aa8.08□□□□□ -1.12
HDAC4-204ENST00000446876 M0R143 59 aa8.07□□□□□ -1.12
HDAC4-204ENST00000446876 SCGB1C2P0DMR2 95 aa8.07□□□□□ -1.12
HDAC4-204ENST00000446876 FAT4Q6V0I7 4981 aa8.06□□□□□ -1.12
HDAC4-204ENST00000446876 NAA38Q9BRA0 125 aaKnown RBP8.06□□□□□ -1.12
HDAC4-204ENST00000446876 A0A0U1RQV1 116 aa8.05□□□□□ -1.12
HDAC4-204ENST00000446876 LST1O00453 97 aa8.05□□□□□ -1.12
HDAC4-204ENST00000446876 Q6Q795 121 aa8.05□□□□□ -1.12
HDAC4-204ENST00000446876 TEN1Q86WV5 123 aa8.05□□□□□ -1.12
HDAC4-204ENST00000446876 A0A087WSZ3 146 aa8.03□□□□□ -1.12
HDAC4-204ENST00000446876 A0A1W2PNM2 257 aa8.03□□□□□ -1.12
HDAC4-204ENST00000446876 TRACP01848 142 aa8.03□□□□□ -1.12
HDAC4-204ENST00000446876 TSTD3H0UI37 97 aa8.02□□□□□ -1.13
HDAC4-204ENST00000446876 TMEM256-PLSCR3K7ERE1 68 aa8.02□□□□□ -1.13
HDAC4-204ENST00000446876 PCOTHQ58A44 107 aa8.02□□□□□ -1.13
HDAC4-204ENST00000446876 H3BQ85 93 aa8.01□□□□□ -1.13
HDAC4-204ENST00000446876 SS18L2Q9UHA2 77 aa8.01□□□□□ -1.13
HDAC4-204ENST00000446876 BATFQ16520 125 aa8□□□□□ -1.13
HDAC4-204ENST00000446876 ANKRD29Q8N6D5 301 aa8□□□□□ -1.13
HDAC4-204ENST00000446876 UBE2V1Q13404 147 aa7.98□□□□□ -1.13
HDAC4-204ENST00000446876 Q96NJ1 140 aa7.97□□□□□ -1.13
HDAC4-204ENST00000446876 RPL37P61927 97 aaKnown RBP7.96□□□□□ -1.14
HDAC4-204ENST00000446876 OBSCN-AS1Q96MR7 158 aa7.96□□□□□ -1.14
HDAC4-204ENST00000446876 BAALC-AS2P0C853 105 aa7.95□□□□□ -1.14
HDAC4-204ENST00000446876 TRBV7-4A0A0J9YYF1 115 aa7.94□□□□□ -1.14
HDAC4-204ENST00000446876 CCKP06307 115 aa7.94□□□□□ -1.14
HDAC4-204ENST00000446876 ATXN8Q156A1 80 aa7.94□□□□□ -1.14
HDAC4-204ENST00000446876 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
HDAC4-204ENST00000446876 VPS25Q9BRG1 176 aa7.92□□□□□ -1.14
HDAC4-204ENST00000446876 RBM3P98179 157 aaKnown RBP7.91□□□□□ -1.14
HDAC4-204ENST00000446876 SIGMAR1Q99720 223 aa7.91□□□□□ -1.14
HDAC4-204ENST00000446876 DSCR8Q96T75 97 aa7.89□□□□□ -1.15
HDAC4-204ENST00000446876 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
HDAC4-204ENST00000446876 IGKV4-1P06312 121 aa7.87□□□□□ -1.15
HDAC4-204ENST00000446876 DSCR10P59022 87 aa7.87□□□□□ -1.15
HDAC4-204ENST00000446876 LYRM7Q5U5X0 104 aa7.87□□□□□ -1.15
HDAC4-204ENST00000446876 TAX1BP3O14907 124 aa7.86□□□□□ -1.15
HDAC4-204ENST00000446876 C9orf118A6NHY6 69 aa7.85□□□□□ -1.15
HDAC4-204ENST00000446876 C9JAW5 83 aa7.85□□□□□ -1.15
HDAC4-204ENST00000446876 Q75L30 129 aa7.85□□□□□ -1.15
HDAC4-204ENST00000446876 LINC00472Q9H8W2 130 aa7.85□□□□□ -1.15
HDAC4-204ENST00000446876 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.15
HDAC4-204ENST00000446876 TRBV20-1A0A075B6N2 111 aa7.83□□□□□ -1.16
HDAC4-204ENST00000446876 LCE2CQ5TA81 110 aa7.82□□□□□ -1.16
HDAC4-204ENST00000446876 A0A1W2PPM0 123 aa7.81□□□□□ -1.16
HDAC4-204ENST00000446876 Q6ZQT0 140 aa7.81□□□□□ -1.16
HDAC4-204ENST00000446876 MTURNQ8N3F0 131 aa7.81□□□□□ -1.16
HDAC4-204ENST00000446876 C14orf132Q9NPU4 83 aa7.81□□□□□ -1.16
HDAC4-204ENST00000446876 JMJD7-PLA2G4BH0Y9G9 81 aa7.8□□□□□ -1.16
HDAC4-204ENST00000446876 ATP11AUNQ6ZP68 121 aa7.8□□□□□ -1.16
HDAC4-204ENST00000446876 NOTCH2NLQ7Z3S9 236 aa7.8□□□□□ -1.16
HDAC4-204ENST00000446876 C20orf166-AS1Q96NR2 134 aa7.8□□□□□ -1.16
HDAC4-204ENST00000446876 LOC110117498A0A087WWA1 95 aa7.79□□□□□ -1.16
HDAC4-204ENST00000446876 A8MUU9 505 aa7.79□□□□□ -1.16
HDAC4-204ENST00000446876 IGHV6-1A0A0B4J1U7 121 aa7.78□□□□□ -1.16
HDAC4-204ENST00000446876 LINC00313P59037 77 aa7.78□□□□□ -1.16
HDAC4-204ENST00000446876 KRTAP16-1A8MUX0 517 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms