RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 PRO1854Q9UHT4 67 aa12.41□□□□□ -0.42
HDLBP-220ENST00000442730 LINC01547P58512 204 aaPredicted RBP12.39□□□□□ -0.43
HDLBP-220ENST00000442730 LOC105371267A0A1B0GV96 52 aa12.38□□□□□ -0.43
HDLBP-220ENST00000442730 hADV29S1A0JD25 119 aa12.38□□□□□ -0.43
HDLBP-220ENST00000442730 K7ERJ3 54 aa12.38□□□□□ -0.43
HDLBP-220ENST00000442730 Q6ZQY7 126 aa12.36□□□□□ -0.43
HDLBP-220ENST00000442730 SMIM29Q86T20 159 aa12.36□□□□□ -0.43
HDLBP-220ENST00000442730 HRCT1Q6UXD1 115 aa12.34□□□□□ -0.43
HDLBP-220ENST00000442730 A0A0U1RQV1 116 aa12.33□□□□□ -0.44
HDLBP-220ENST00000442730 LIMD2Q9BT23 127 aa12.32□□□□□ -0.44
HDLBP-220ENST00000442730 H0YGX0 51 aa12.31□□□□□ -0.44
HDLBP-220ENST00000442730 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-220ENST00000442730 TRIAP1O43715 76 aa12.3□□□□□ -0.44
HDLBP-220ENST00000442730 CD164Q04900 197 aa12.29□□□□□ -0.44
HDLBP-220ENST00000442730 FAM218AQ96MZ4 157 aa12.29□□□□□ -0.44
HDLBP-220ENST00000442730 TSTD3H0UI37 97 aa12.27□□□□□ -0.45
HDLBP-220ENST00000442730 SNCGO76070 127 aa12.27□□□□□ -0.45
HDLBP-220ENST00000442730 F8WEM9 126 aa12.26□□□□□ -0.45
HDLBP-220ENST00000442730 ASB16-AS1Q495Z4 193 aa12.26□□□□□ -0.45
HDLBP-220ENST00000442730 FAT4Q6V0I7 4981 aa12.25□□□□□ -0.45
HDLBP-220ENST00000442730 M0R143 59 aa12.25□□□□□ -0.45
HDLBP-220ENST00000442730 PSMB2P49721 201 aa12.25□□□□□ -0.45
HDLBP-220ENST00000442730 PPDPFLQ8WWR9 84 aa12.24□□□□□ -0.45
HDLBP-220ENST00000442730 A0A0G2JQZ4 141 aa12.23□□□□□ -0.45
HDLBP-220ENST00000442730 A0A1B0GX51 115 aa12.22□□□□□ -0.45
HDLBP-220ENST00000442730 XP32Q5T750 250 aa12.21□□□□□ -0.45
HDLBP-220ENST00000442730 CLEC2BQ92478 149 aa12.21□□□□□ -0.45
HDLBP-220ENST00000442730 OCIAD2Q56VL3 154 aa12.2□□□□□ -0.46
HDLBP-220ENST00000442730 Q5XG85 94 aa12.2□□□□□ -0.46
HDLBP-220ENST00000442730 COX6CP09669 75 aa12.19□□□□□ -0.46
HDLBP-220ENST00000442730 SEC61BP60468 96 aaKnown RBP12.18□□□□□ -0.46
HDLBP-220ENST00000442730 SNHG12Q9BXW3 62 aa12.16□□□□□ -0.46
HDLBP-220ENST00000442730 IGLV8-61A0A075B6I0 122 aa12.14□□□□□ -0.47
HDLBP-220ENST00000442730 DNAL4O96015 105 aa12.14□□□□□ -0.47
HDLBP-220ENST00000442730 LCE2AQ5TA79 106 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-220ENST00000442730 Q6JHZ5 121 aa12.13□□□□□ -0.47
HDLBP-220ENST00000442730 KRTAP4-1Q9BYQ7 146 aa12.13□□□□□ -0.47
HDLBP-220ENST00000442730 GHRHP01286 108 aa12.12□□□□□ -0.47
HDLBP-220ENST00000442730 C1orf195Q5TG92 126 aa12.12□□□□□ -0.47
HDLBP-220ENST00000442730 H3BUT2 72 aa12.1□□□□□ -0.47
HDLBP-220ENST00000442730 C9orf92A6NGG3 77 aa12.09□□□□□ -0.47
HDLBP-220ENST00000442730 SCGB1C2P0DMR2 95 aa12.09□□□□□ -0.47
HDLBP-220ENST00000442730 IGFL1Q6UW32 110 aa12.09□□□□□ -0.47
HDLBP-220ENST00000442730 FABP2P12104 132 aa12.08□□□□□ -0.48
HDLBP-220ENST00000442730 BATFQ16520 125 aa12.08□□□□□ -0.48
HDLBP-220ENST00000442730 ORMDL1Q9P0S3 153 aa12.08□□□□□ -0.48
HDLBP-220ENST00000442730 NDUFV3P56181 108 aaKnown RBP12.07□□□□□ -0.48
HDLBP-220ENST00000442730 LST1O00453 97 aa12.06□□□□□ -0.48
HDLBP-220ENST00000442730 TCL1BO95988 128 aa12.05□□□□□ -0.48
HDLBP-220ENST00000442730 NAA38Q9BRA0 125 aaKnown RBP12.05□□□□□ -0.48
HDLBP-220ENST00000442730 TRACP01848 142 aa12.04□□□□□ -0.48
HDLBP-220ENST00000442730 H3BQ85 93 aa12.03□□□□□ -0.48
HDLBP-220ENST00000442730 TRBV7-7A0A0K0K1E9 115 aa12.01□□□□□ -0.49
HDLBP-220ENST00000442730 H3BMG7 143 aa12□□□□□ -0.49
HDLBP-220ENST00000442730 TMEM256-PLSCR3K7ERE1 68 aa11.98□□□□□ -0.49
HDLBP-220ENST00000442730 PCOTHQ58A44 107 aa11.97□□□□□ -0.49
HDLBP-220ENST00000442730 A0A1B0GV72 72 aa11.96□□□□□ -0.49
HDLBP-220ENST00000442730 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.49
HDLBP-220ENST00000442730 ATXN8Q156A1 80 aa11.95□□□□□ -0.5
HDLBP-220ENST00000442730 UBE2V1Q13404 147 aa11.92□□□□□ -0.5
HDLBP-220ENST00000442730 Q6Q795 121 aa11.92□□□□□ -0.5
HDLBP-220ENST00000442730 TEN1Q86WV5 123 aa11.91□□□□□ -0.5
HDLBP-220ENST00000442730 RPL37P61927 97 aaKnown RBP11.88□□□□□ -0.51
HDLBP-220ENST00000442730 C9orf118A6NHY6 69 aa11.87□□□□□ -0.51
HDLBP-220ENST00000442730 TAX1BP3O14907 124 aa11.87□□□□□ -0.51
HDLBP-220ENST00000442730 ANKRD29Q8N6D5 301 aa11.87□□□□□ -0.51
HDLBP-220ENST00000442730 SS18L2Q9UHA2 77 aa11.87□□□□□ -0.51
HDLBP-220ENST00000442730 BAALC-AS2P0C853 105 aa11.86□□□□□ -0.51
HDLBP-220ENST00000442730 TRBV20-1A0A075B6N2 111 aa11.85□□□□□ -0.51
HDLBP-220ENST00000442730 A0A087WSZ3 146 aa11.84□□□□□ -0.51
HDLBP-220ENST00000442730 A0A1W2PNM2 257 aa11.84□□□□□ -0.51
HDLBP-220ENST00000442730 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
HDLBP-220ENST00000442730 LCE2CQ5TA81 110 aa11.82□□□□□ -0.52
HDLBP-220ENST00000442730 KRTAP19-2Q3LHN2 52 aa11.81□□□□□ -0.52
HDLBP-220ENST00000442730 TRBV7-4A0A0J9YYF1 115 aa11.79□□□□□ -0.52
HDLBP-220ENST00000442730 RBM3P98179 157 aaKnown RBP11.79□□□□□ -0.52
HDLBP-220ENST00000442730 C9JAW5 83 aa11.78□□□□□ -0.52
HDLBP-220ENST00000442730 CCKP06307 115 aa11.78□□□□□ -0.52
HDLBP-220ENST00000442730 DSCR8Q96T75 97 aa11.78□□□□□ -0.52
HDLBP-220ENST00000442730 OBSCN-AS1Q96MR7 158 aa11.77□□□□□ -0.53
HDLBP-220ENST00000442730 KRTAP9-2Q9BYQ4 174 aa11.77□□□□□ -0.53
HDLBP-220ENST00000442730 COL5A1-AS1Q5SY13 56 aa11.76□□□□□ -0.53
HDLBP-220ENST00000442730 VPS25Q9BRG1 176 aa11.74□□□□□ -0.53
HDLBP-220ENST00000442730 PCP4L1A6NKN8 68 aa11.73□□□□□ -0.53
HDLBP-220ENST00000442730 JMJD7-PLA2G4BH0Y9G9 81 aa11.71□□□□□ -0.53
HDLBP-220ENST00000442730 Q96NJ1 140 aa11.71□□□□□ -0.53
HDLBP-220ENST00000442730 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
HDLBP-220ENST00000442730 Q75L30 129 aa11.69□□□□□ -0.54
HDLBP-220ENST00000442730 H3BT86 120 aa11.68□□□□□ -0.54
HDLBP-220ENST00000442730 MTURNQ8N3F0 131 aa11.68□□□□□ -0.54
HDLBP-220ENST00000442730 SIGMAR1Q99720 223 aa11.67□□□□□ -0.54
HDLBP-220ENST00000442730 MT1HP80294 61 aa11.66□□□□□ -0.54
HDLBP-220ENST00000442730 LOC110117498A0A087WWA1 95 aa11.65□□□□□ -0.54
HDLBP-220ENST00000442730 C14orf132Q9NPU4 83 aa11.65□□□□□ -0.54
HDLBP-220ENST00000442730 Q6ZQT0 140 aa11.64□□□□□ -0.55
HDLBP-220ENST00000442730 PDE6GP18545 87 aa11.61□□□□□ -0.55
HDLBP-220ENST00000442730 C21orf62-AS1Q17RA5 79 aa11.61□□□□□ -0.55
HDLBP-220ENST00000442730 ATP11AUNQ6ZP68 121 aa11.61□□□□□ -0.55
HDLBP-220ENST00000442730 IGKV4-1P06312 121 aa11.59□□□□□ -0.55
HDLBP-220ENST00000442730 C20orf166-AS1Q96NR2 134 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms