RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 DEFB105AQ8NG35 78 aa9.03□□□□□ -0.96
TNFRSF1A-204ENST00000440083 DSCR8Q96T75 97 aa9.03□□□□□ -0.96
TNFRSF1A-204ENST00000440083 SIGMAR1Q99720 223 aa9.03□□□□□ -0.96
TNFRSF1A-204ENST00000440083 UBE2AP49459 152 aa9.02□□□□□ -0.97
TNFRSF1A-204ENST00000440083 PRLHP81277 87 aa9.02□□□□□ -0.97
TNFRSF1A-204ENST00000440083 CCKP06307 115 aa9.01□□□□□ -0.97
TNFRSF1A-204ENST00000440083 FLG2Q5D862 2391 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-204ENST00000440083 PDE6GP18545 87 aa9□□□□□ -0.97
TNFRSF1A-204ENST00000440083 KRTAP10-4P60372 401 aaPredicted RBP9□□□□□ -0.97
TNFRSF1A-204ENST00000440083 C21orf62-AS1Q17RA5 79 aa9□□□□□ -0.97
TNFRSF1A-204ENST00000440083 SMCR5Q8TEV8 140 aa9□□□□□ -0.97
TNFRSF1A-204ENST00000440083 PKHD1L1Q86WI1 4243 aa9□□□□□ -0.97
TNFRSF1A-204ENST00000440083 LOC110117498A0A087WWA1 95 aa8.99□□□□□ -0.97
TNFRSF1A-204ENST00000440083 BCE1O60756 84 aa8.99□□□□□ -0.97
TNFRSF1A-204ENST00000440083 HIGD2AQ9BW72 106 aa8.99□□□□□ -0.97
TNFRSF1A-204ENST00000440083 H0Y9J4 135 aa8.98□□□□□ -0.97
TNFRSF1A-204ENST00000440083 ERC2-IT1O76042 136 aa8.98□□□□□ -0.97
TNFRSF1A-204ENST00000440083 RPL37AP61513 92 aaKnown RBP8.98□□□□□ -0.97
TNFRSF1A-204ENST00000440083 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
TNFRSF1A-204ENST00000440083 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
TNFRSF1A-204ENST00000440083 IGLV5-48A0A075B6I7 105 aa8.97□□□□□ -0.97
TNFRSF1A-204ENST00000440083 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
TNFRSF1A-204ENST00000440083 Q8N377 158 aa8.97□□□□□ -0.97
TNFRSF1A-204ENST00000440083 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-204ENST00000440083 Q6ZQT0 140 aa8.96□□□□□ -0.98
TNFRSF1A-204ENST00000440083 F8WEM9 126 aa8.95□□□□□ -0.98
TNFRSF1A-204ENST00000440083 MT-ATP8P03928 68 aa8.95□□□□□ -0.98
TNFRSF1A-204ENST00000440083 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
TNFRSF1A-204ENST00000440083 TRBV7-4A0A0J9YYF1 115 aa8.93□□□□□ -0.98
TNFRSF1A-204ENST00000440083 LINC00643Q86TS7 51 aa8.92□□□□□ -0.98
TNFRSF1A-204ENST00000440083 LINC00846Q9NV44 126 aa8.91□□□□□ -0.98
TNFRSF1A-204ENST00000440083 C3orf22Q8N5N4 141 aa8.9□□□□□ -0.98
TNFRSF1A-204ENST00000440083 UBL5Q9BZL1 73 aa8.89□□□□□ -0.99
TNFRSF1A-204ENST00000440083 PSORS1C2Q9UIG4 136 aa8.89□□□□□ -0.99
TNFRSF1A-204ENST00000440083 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
TNFRSF1A-204ENST00000440083 SCGB1A1P11684 91 aa8.88□□□□□ -0.99
TNFRSF1A-204ENST00000440083 C1orf137Q5JT78 98 aa8.88□□□□□ -0.99
TNFRSF1A-204ENST00000440083 KRTAP13-1Q8IUC0 172 aa8.88□□□□□ -0.99
TNFRSF1A-204ENST00000440083 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
TNFRSF1A-204ENST00000440083 ZNF706Q9Y5V0 76 aaPredicted RBP8.87□□□□□ -0.99
TNFRSF1A-204ENST00000440083 Q6JHZ5 121 aa8.86□□□□□ -0.99
TNFRSF1A-204ENST00000440083 SPRR1BP22528 89 aa8.85□□□□□ -0.99
TNFRSF1A-204ENST00000440083 SMIM29Q86T20 159 aa8.85□□□□□ -0.99
TNFRSF1A-204ENST00000440083 DMBT1Q9UGM3 2413 aaPredicted RBP8.84□□□□□ -0.99
TNFRSF1A-204ENST00000440083 ATP5EP2Q5VTU8 51 aa8.84□□□□□ -0.99
TNFRSF1A-204ENST00000440083 Q6Q795 121 aa8.84□□□□□ -0.99
TNFRSF1A-204ENST00000440083 TRBV7-7A0A0K0K1E9 115 aa8.83□□□□□ -1
TNFRSF1A-204ENST00000440083 ZNF861PO60384 105 aa8.81□□□□□ -1
TNFRSF1A-204ENST00000440083 Q8NBF4 154 aa8.81□□□□□ -1
TNFRSF1A-204ENST00000440083 IMUPQ9GZP8 106 aa8.81□□□□□ -1
TNFRSF1A-204ENST00000440083 IGKV3D-7A0A0C4DH55 119 aa8.8□□□□□ -1
TNFRSF1A-204ENST00000440083 A0A1B0GW54 56 aa8.8□□□□□ -1
TNFRSF1A-204ENST00000440083 IGLV7-43P04211 117 aa8.8□□□□□ -1
TNFRSF1A-204ENST00000440083 Q6ZVQ6 151 aa8.8□□□□□ -1
TNFRSF1A-204ENST00000440083 SPRR4Q96PI1 79 aa8.8□□□□□ -1
TNFRSF1A-204ENST00000440083 IGLV8-61A0A075B6I0 122 aa8.79□□□□□ -1
TNFRSF1A-204ENST00000440083 PCP4P48539 62 aa8.78□□□□□ -1
TNFRSF1A-204ENST00000440083 A0A1W2PNM2 257 aa8.77□□□□□ -1.01
TNFRSF1A-204ENST00000440083 IGFL1Q6UW32 110 aa8.77□□□□□ -1.01
TNFRSF1A-204ENST00000440083 NREPQ16612 68 aa8.75□□□□□ -1.01
TNFRSF1A-204ENST00000440083 LINC00483Q53H64 154 aa8.75□□□□□ -1.01
TNFRSF1A-204ENST00000440083 C9orf153Q5TBE3 101 aa8.75□□□□□ -1.01
TNFRSF1A-204ENST00000440083 IGLV9-49A0A0B4J1Y8 123 aa8.73□□□□□ -1.01
TNFRSF1A-204ENST00000440083 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
TNFRSF1A-204ENST00000440083 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
TNFRSF1A-204ENST00000440083 HIST1H4AP62805 103 aaKnown RBP8.72□□□□□ -1.01
TNFRSF1A-204ENST00000440083 CXCL6P80162 114 aa8.72□□□□□ -1.01
TNFRSF1A-204ENST00000440083 HERC1Q15751 4861 aa8.72□□□□□ -1.01
TNFRSF1A-204ENST00000440083 CRYGAP11844 174 aa8.71□□□□□ -1.02
TNFRSF1A-204ENST00000440083 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
TNFRSF1A-204ENST00000440083 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
TNFRSF1A-204ENST00000440083 J3QL48 77 aa8.7□□□□□ -1.02
TNFRSF1A-204ENST00000440083 TNXBP22105 4242 aa8.69□□□□□ -1.02
TNFRSF1A-204ENST00000440083 A0A0G2JQZ4 141 aa8.69□□□□□ -1.02
TNFRSF1A-204ENST00000440083 BPY2O14599 106 aa8.68□□□□□ -1.02
TNFRSF1A-204ENST00000440083 OXTP01178 125 aa8.68□□□□□ -1.02
TNFRSF1A-204ENST00000440083 MT1HL1P0DM35 61 aa8.67□□□□□ -1.02
TNFRSF1A-204ENST00000440083 MOBPQ13875 183 aa8.67□□□□□ -1.02
TNFRSF1A-204ENST00000440083 A0A087WSZ3 146 aa8.66□□□□□ -1.02
TNFRSF1A-204ENST00000440083 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
TNFRSF1A-204ENST00000440083 A0A087WVE0 104 aa8.64□□□□□ -1.03
TNFRSF1A-204ENST00000440083 ANAPC11Q9NYG5 84 aa8.63□□□□□ -1.03
TNFRSF1A-204ENST00000440083 ATOX1O00244 68 aa8.61□□□□□ -1.03
TNFRSF1A-204ENST00000440083 KRTAP1-4P0C5Y4 121 aa8.61□□□□□ -1.03
TNFRSF1A-204ENST00000440083 PRR26Q8N8Z3 221 aa8.59□□□□□ -1.03
TNFRSF1A-204ENST00000440083 FAM229BQ4G0N7 80 aa8.58□□□□□ -1.04
TNFRSF1A-204ENST00000440083 HRCT1Q6UXD1 115 aa8.58□□□□□ -1.04
TNFRSF1A-204ENST00000440083 SS18L2Q9UHA2 77 aa8.58□□□□□ -1.04
TNFRSF1A-204ENST00000440083 KRTAP10-8P60410 259 aa8.57□□□□□ -1.04
TNFRSF1A-204ENST00000440083 IGKV4-1P06312 121 aa8.56□□□□□ -1.04
TNFRSF1A-204ENST00000440083 SSBP3-AS1Q7Z2R9 100 aa8.56□□□□□ -1.04
TNFRSF1A-204ENST00000440083 Q8N9L7 120 aa8.55□□□□□ -1.04
TNFRSF1A-204ENST00000440083 A0A087X002 238 aa8.52□□□□□ -1.05
TNFRSF1A-204ENST00000440083 J3KT08 172 aa8.52□□□□□ -1.05
TNFRSF1A-204ENST00000440083 DSCR10P59022 87 aa8.51□□□□□ -1.05
TNFRSF1A-204ENST00000440083 CD164Q04900 197 aa8.51□□□□□ -1.05
TNFRSF1A-204ENST00000440083 DEFB116Q30KQ4 102 aa8.51□□□□□ -1.05
TNFRSF1A-204ENST00000440083 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
TNFRSF1A-204ENST00000440083 K7EQZ3 153 aa8.5□□□□□ -1.05
TNFRSF1A-204ENST00000440083 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms