RNA–Protein interactions for RNA: ENST00000435422.7

SGCD-202, Transcript of sarcoglycan delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SGCD, Length 9,755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCD-202ENST00000435422 Q8NDZ9 215 aa4.56□□□□□ -1.68
SGCD-202ENST00000435422 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
SGCD-202ENST00000435422 STAB2Q8WWQ8 2551 aa4.56□□□□□ -1.68
SGCD-202ENST00000435422 MMP24-AS1A0A0U1RRL7 71 aa4.55□□□□□ -1.68
SGCD-202ENST00000435422 MAST4O15021 2626 aa4.55□□□□□ -1.68
SGCD-202ENST00000435422 TNP2Q05952 138 aa4.53□□□□□ -1.68
SGCD-202ENST00000435422 SRCAPQ6ZRS2 3230 aa4.53□□□□□ -1.68
SGCD-202ENST00000435422 Q5VSD8 79 aa4.53□□□□□ -1.68
SGCD-202ENST00000435422 ITPR3Q14573 2671 aa4.52□□□□□ -1.69
SGCD-202ENST00000435422 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
SGCD-202ENST00000435422 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
SGCD-202ENST00000435422 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
SGCD-202ENST00000435422 ASB16-AS1Q495Z4 193 aa4.48□□□□□ -1.69
SGCD-202ENST00000435422 NOTCH1P46531 2555 aa4.48□□□□□ -1.69
SGCD-202ENST00000435422 FLNAP21333 2647 aaKnown RBP4.46□□□□□ -1.7
SGCD-202ENST00000435422 C10orf142B7Z368 130 aa4.45□□□□□ -1.7
SGCD-202ENST00000435422 HELZ2Q9BYK8 2649 aaKnown RBP4.45□□□□□ -1.7
SGCD-202ENST00000435422 CHD6Q8TD26 2715 aa4.44□□□□□ -1.7
SGCD-202ENST00000435422 KRTAP10-3P60369 221 aa4.44□□□□□ -1.7
SGCD-202ENST00000435422 OXTP01178 125 aa4.43□□□□□ -1.7
SGCD-202ENST00000435422 COL6A5A8TX70 2615 aa4.43□□□□□ -1.7
SGCD-202ENST00000435422 A0A096LNT2 108 aa4.43□□□□□ -1.7
SGCD-202ENST00000435422 PANO1I0J062 215 aa4.43□□□□□ -1.7
SGCD-202ENST00000435422 LINC00472Q9H8W2 130 aa4.42□□□□□ -1.7
SGCD-202ENST00000435422 A8MU10 97 aa4.4□□□□□ -1.7
SGCD-202ENST00000435422 PLAC8Q9NZF1 115 aa4.38□□□□□ -1.71
SGCD-202ENST00000435422 KRTAP26-1Q6PEX3 210 aa4.38□□□□□ -1.71
SGCD-202ENST00000435422 GCN1Q92616 2671 aaKnown RBP4.38□□□□□ -1.71
SGCD-202ENST00000435422 Q6ZR54 194 aa4.37□□□□□ -1.71
SGCD-202ENST00000435422 A6NN06 94 aa4.37□□□□□ -1.71
SGCD-202ENST00000435422 A8MUU9 505 aa4.37□□□□□ -1.71
SGCD-202ENST00000435422 NSD1Q96L73 2696 aaPredicted RBP4.36□□□□□ -1.71
SGCD-202ENST00000435422 TEX15Q9BXT5 2789 aa4.36□□□□□ -1.71
SGCD-202ENST00000435422 UNC79Q9P2D8 2635 aa4.36□□□□□ -1.71
SGCD-202ENST00000435422 FLNBO75369 2602 aaKnown RBP4.35□□□□□ -1.71
SGCD-202ENST00000435422 SPRR1BP22528 89 aa4.34□□□□□ -1.72
SGCD-202ENST00000435422 CEP350Q5VT06 3117 aa4.33□□□□□ -1.72
SGCD-202ENST00000435422 TEP1Q99973 2627 aaKnown RBP4.32□□□□□ -1.72
SGCD-202ENST00000435422 TNP1P09430 55 aa4.31□□□□□ -1.72
SGCD-202ENST00000435422 SPRR1AP35321 89 aa4.29□□□□□ -1.72
SGCD-202ENST00000435422 P0C880 135 aa4.29□□□□□ -1.72
SGCD-202ENST00000435422 APCP25054 2843 aa4.26□□□□□ -1.73
SGCD-202ENST00000435422 IGSF10Q6WRI0 2623 aa4.24□□□□□ -1.73
SGCD-202ENST00000435422 PCNTO95613 3336 aa4.23□□□□□ -1.73
SGCD-202ENST00000435422 KRTAP10-1P60331 282 aa4.22□□□□□ -1.73
SGCD-202ENST00000435422 KRTAP4-16G5E9R7 235 aaPredicted RBP4.21□□□□□ -1.74
SGCD-202ENST00000435422 KRTAP10-2P60368 255 aa4.2□□□□□ -1.74
SGCD-202ENST00000435422 A0A087X002 238 aa4.2□□□□□ -1.74
SGCD-202ENST00000435422 PP632Q6XCG6 107 aa4.2□□□□□ -1.74
SGCD-202ENST00000435422 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
SGCD-202ENST00000435422 CFAP54Q96N23 3096 aa4.2□□□□□ -1.74
SGCD-202ENST00000435422 ITPR2Q14571 2701 aa4.2□□□□□ -1.74
SGCD-202ENST00000435422 KRTAP11-1Q8IUC1 163 aa4.19□□□□□ -1.74
SGCD-202ENST00000435422 UTP20O75691 2785 aaKnown RBP4.19□□□□□ -1.74
SGCD-202ENST00000435422 KRTAP29-1A8MX34 341 aaPredicted RBP4.19□□□□□ -1.74
SGCD-202ENST00000435422 KRTAP1-5Q9BYS1 174 aa4.18□□□□□ -1.74
SGCD-202ENST00000435422 C5orf42Q9H799 3197 aa4.18□□□□□ -1.74
SGCD-202ENST00000435422 NBEAL2Q6ZNJ1 2754 aa4.17□□□□□ -1.74
SGCD-202ENST00000435422 KRTAP10-8P60410 259 aa4.17□□□□□ -1.74
SGCD-202ENST00000435422 GOLGB1Q14789 3259 aaKnown RBP4.16□□□□□ -1.74
SGCD-202ENST00000435422 MAP1AP78559 2803 aaPredicted RBP4.16□□□□□ -1.74
SGCD-202ENST00000435422 A0A0C4DFX4 3053 aa4.14□□□□□ -1.75
SGCD-202ENST00000435422 DNAH12Q6ZR08 3092 aa4.14□□□□□ -1.75
SGCD-202ENST00000435422 KMT2BQ9UMN6 2715 aaPredicted RBP4.13□□□□□ -1.75
SGCD-202ENST00000435422 UBR5O95071 2799 aaPredicted RBP4.13□□□□□ -1.75
SGCD-202ENST00000435422 EP400Q96L91 3159 aa4.12□□□□□ -1.75
SGCD-202ENST00000435422 KRTAP1-3Q8IUG1 177 aa4.12□□□□□ -1.75
SGCD-202ENST00000435422 SETXQ7Z333 2677 aaKnown RBP4.11□□□□□ -1.75
SGCD-202ENST00000435422 DSPP15924 2871 aaKnown RBP4.11□□□□□ -1.75
SGCD-202ENST00000435422 KRTAP1-1Q07627 177 aa4.1□□□□□ -1.75
SGCD-202ENST00000435422 UTRNP46939 3433 aa4.1□□□□□ -1.75
SGCD-202ENST00000435422 ZNF292O60281 2723 aa4.09□□□□□ -1.75
SGCD-202ENST00000435422 LCE6AA0A183 80 aa4.09□□□□□ -1.76
SGCD-202ENST00000435422 TRANK1O15050 2925 aa4.08□□□□□ -1.76
SGCD-202ENST00000435422 LAMA2P24043 3122 aaKnown RBP4.07□□□□□ -1.76
SGCD-202ENST00000435422 ITPR1Q14643 2758 aa4.07□□□□□ -1.76
SGCD-202ENST00000435422 LRBAP50851 2863 aa4.06□□□□□ -1.76
SGCD-202ENST00000435422 RPS29P62273 56 aaKnown RBP4.05□□□□□ -1.76
SGCD-202ENST00000435422 A0A1B0GVY2 172 aa4.04□□□□□ -1.76
SGCD-202ENST00000435422 FREM2Q5SZK8 3169 aa4.02□□□□□ -1.77
SGCD-202ENST00000435422 H0YAA0 97 aa4□□□□□ -1.77
SGCD-202ENST00000435422 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
SGCD-202ENST00000435422 Q6ZRN7 208 aaPredicted RBP3.99□□□□□ -1.77
SGCD-202ENST00000435422 KRTAP13-2Q52LG2 175 aa3.97□□□□□ -1.77
SGCD-202ENST00000435422 TRIOO75962 3097 aa3.96□□□□□ -1.77
SGCD-202ENST00000435422 CHD9Q3L8U1 2897 aa3.96□□□□□ -1.78
SGCD-202ENST00000435422 CRYBG3Q68DQ2 2970 aa3.96□□□□□ -1.78
SGCD-202ENST00000435422 FRYQ5TBA9 3013 aa3.95□□□□□ -1.78
SGCD-202ENST00000435422 ASH1LQ9NR48 2969 aaKnown RBP3.94□□□□□ -1.78
SGCD-202ENST00000435422 KRTAP10-10P60014 251 aa3.93□□□□□ -1.78
SGCD-202ENST00000435422 HIVEP1P15822 2718 aa3.92□□□□□ -1.78
SGCD-202ENST00000435422 REV3LO60673 3130 aa3.92□□□□□ -1.78
SGCD-202ENST00000435422 KALRNO60229 2985 aa3.91□□□□□ -1.78
SGCD-202ENST00000435422 TENM3Q9P273 2699 aa3.91□□□□□ -1.78
SGCD-202ENST00000435422 MGAQ8IWI9 3026 aa3.9□□□□□ -1.79
SGCD-202ENST00000435422 XIRP2A4UGR9 3374 aa3.88□□□□□ -1.79
SGCD-202ENST00000435422 CHD7Q9P2D1 2997 aa3.88□□□□□ -1.79
SGCD-202ENST00000435422 RANBP2P49792 3224 aaKnown RBP3.88□□□□□ -1.79
SGCD-202ENST00000435422 KRTAP12-2P59991 146 aa3.87□□□□□ -1.79
SGCD-202ENST00000435422 TGP01266 2768 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms