RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 ATRQ13535 2644 aa6.56□□□□□ -1.36
PKNOX1-203ENST00000432907 TRIOO75962 3097 aa6.56□□□□□ -1.36
PKNOX1-203ENST00000432907 A0A1B0GU33 70 aa6.56□□□□□ -1.36
PKNOX1-203ENST00000432907 PRUNE2Q8WUY3 3088 aa6.54□□□□□ -1.36
PKNOX1-203ENST00000432907 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
PKNOX1-203ENST00000432907 A0A0A0MQY5 61 aa6.52□□□□□ -1.37
PKNOX1-203ENST00000432907 KRTAP1-1Q07627 177 aa6.51□□□□□ -1.37
PKNOX1-203ENST00000432907 AKAP13Q12802 2813 aa6.51□□□□□ -1.37
PKNOX1-203ENST00000432907 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
PKNOX1-203ENST00000432907 A6NN06 94 aa6.5□□□□□ -1.37
PKNOX1-203ENST00000432907 TNRC18O15417 2968 aaPredicted RBP6.5□□□□□ -1.37
PKNOX1-203ENST00000432907 DMAC1Q96GE9 116 aa6.5□□□□□ -1.37
PKNOX1-203ENST00000432907 HECTD1Q9ULT8 2610 aa6.5□□□□□ -1.37
PKNOX1-203ENST00000432907 ZCCHC13Q8WW36 166 aaKnown RBP6.5□□□□□ -1.37
PKNOX1-203ENST00000432907 DMBT1Q9UGM3 2413 aaPredicted RBP6.49□□□□□ -1.37
PKNOX1-203ENST00000432907 ASB16-AS1Q495Z4 193 aa6.48□□□□□ -1.37
PKNOX1-203ENST00000432907 PSORS1C2Q9UIG4 136 aa6.48□□□□□ -1.37
PKNOX1-203ENST00000432907 SPRR1AP35321 89 aa6.48□□□□□ -1.37
PKNOX1-203ENST00000432907 LINC00472Q9H8W2 130 aa6.48□□□□□ -1.37
PKNOX1-203ENST00000432907 FLNBO75369 2602 aaKnown RBP6.47□□□□□ -1.37
PKNOX1-203ENST00000432907 FRYQ5TBA9 3013 aa6.46□□□□□ -1.38
PKNOX1-203ENST00000432907 HELZ2Q9BYK8 2649 aaKnown RBP6.45□□□□□ -1.38
PKNOX1-203ENST00000432907 MAST4O15021 2626 aa6.45□□□□□ -1.38
PKNOX1-203ENST00000432907 FREM2Q5SZK8 3169 aa6.45□□□□□ -1.38
PKNOX1-203ENST00000432907 A8MU10 97 aa6.44□□□□□ -1.38
PKNOX1-203ENST00000432907 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
PKNOX1-203ENST00000432907 LINC00304Q8N9R0 145 aa6.43□□□□□ -1.38
PKNOX1-203ENST00000432907 MGAQ8IWI9 3026 aa6.42□□□□□ -1.38
PKNOX1-203ENST00000432907 TNP2Q05952 138 aa6.41□□□□□ -1.38
PKNOX1-203ENST00000432907 KRTAP10-3P60369 221 aa6.41□□□□□ -1.38
PKNOX1-203ENST00000432907 Q5W150 140 aa6.41□□□□□ -1.38
PKNOX1-203ENST00000432907 CELSR3Q9NYQ7 3312 aa6.4□□□□□ -1.38
PKNOX1-203ENST00000432907 KRTAP10-11P60412 298 aa6.4□□□□□ -1.39
PKNOX1-203ENST00000432907 CHD6Q8TD26 2715 aa6.4□□□□□ -1.39
PKNOX1-203ENST00000432907 DCHS1Q96JQ0 3298 aa6.39□□□□□ -1.39
PKNOX1-203ENST00000432907 A0A087WTM6 91 aa6.39□□□□□ -1.39
PKNOX1-203ENST00000432907 FLNAP21333 2647 aaKnown RBP6.39□□□□□ -1.39
PKNOX1-203ENST00000432907 KRTAP29-1A8MX34 341 aaPredicted RBP6.39□□□□□ -1.39
PKNOX1-203ENST00000432907 LOC400499M0QZD8 3231 aa6.38□□□□□ -1.39
PKNOX1-203ENST00000432907 CFAP46Q8IYW2 2715 aa6.37□□□□□ -1.39
PKNOX1-203ENST00000432907 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
PKNOX1-203ENST00000432907 ITPR3Q14573 2671 aa6.37□□□□□ -1.39
PKNOX1-203ENST00000432907 ADM2Q7Z4H4 148 aa6.37□□□□□ -1.39
PKNOX1-203ENST00000432907 DMDP11532 3685 aa6.37□□□□□ -1.39
PKNOX1-203ENST00000432907 SPRR1BP22528 89 aa6.37□□□□□ -1.39
PKNOX1-203ENST00000432907 WDFY4Q6ZS81 3184 aa6.36□□□□□ -1.39
PKNOX1-203ENST00000432907 SPATA8Q6RVD6 105 aa6.35□□□□□ -1.39
PKNOX1-203ENST00000432907 LCE6AA0A183 80 aa6.35□□□□□ -1.39
PKNOX1-203ENST00000432907 FRYLO94915 3013 aa6.35□□□□□ -1.39
PKNOX1-203ENST00000432907 Q6ZR54 194 aa6.35□□□□□ -1.39
PKNOX1-203ENST00000432907 UNC79Q9P2D8 2635 aa6.35□□□□□ -1.39
PKNOX1-203ENST00000432907 IGSF10Q6WRI0 2623 aa6.34□□□□□ -1.39
PKNOX1-203ENST00000432907 ASPMQ8IZT6 3477 aa6.34□□□□□ -1.39
PKNOX1-203ENST00000432907 CENPEQ02224 2701 aa6.34□□□□□ -1.39
PKNOX1-203ENST00000432907 KRTAP26-1Q6PEX3 210 aa6.34□□□□□ -1.39
PKNOX1-203ENST00000432907 ROMO1P60602 79 aa6.33□□□□□ -1.4
PKNOX1-203ENST00000432907 K7EIL1 84 aa6.32□□□□□ -1.4
PKNOX1-203ENST00000432907 COX6B2Q6YFQ2 88 aa6.32□□□□□ -1.4
PKNOX1-203ENST00000432907 NOTCH1P46531 2555 aa6.32□□□□□ -1.4
PKNOX1-203ENST00000432907 GCN1Q92616 2671 aaKnown RBP6.32□□□□□ -1.4
PKNOX1-203ENST00000432907 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
PKNOX1-203ENST00000432907 DSPP15924 2871 aaKnown RBP6.31□□□□□ -1.4
PKNOX1-203ENST00000432907 LINC00483Q53H64 154 aa6.31□□□□□ -1.4
PKNOX1-203ENST00000432907 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
PKNOX1-203ENST00000432907 NBEAQ8NFP9 2946 aa6.29□□□□□ -1.4
PKNOX1-203ENST00000432907 STAB1Q9NY15 2570 aa6.29□□□□□ -1.4
PKNOX1-203ENST00000432907 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.29□□□□□ -1.4
PKNOX1-203ENST00000432907 RPL37P61927 97 aaKnown RBP6.28□□□□□ -1.4
PKNOX1-203ENST00000432907 KRTAP25-1Q3LHN0 102 aa6.28□□□□□ -1.4
PKNOX1-203ENST00000432907 STAB2Q8WWQ8 2551 aa6.27□□□□□ -1.41
PKNOX1-203ENST00000432907 KRTAP4-16G5E9R7 235 aaPredicted RBP6.27□□□□□ -1.41
PKNOX1-203ENST00000432907 SPENQ96T58 3664 aaKnown RBP6.26□□□□□ -1.41
PKNOX1-203ENST00000432907 ZFHX4Q86UP3 3567 aa6.26□□□□□ -1.41
PKNOX1-203ENST00000432907 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
PKNOX1-203ENST00000432907 WWC2-AS2Q96NR7 200 aa6.25□□□□□ -1.41
PKNOX1-203ENST00000432907 SMR3BP02814 79 aaPredicted RBP6.24□□□□□ -1.41
PKNOX1-203ENST00000432907 RELNP78509 3460 aa6.24□□□□□ -1.41
PKNOX1-203ENST00000432907 NBEAL2Q6ZNJ1 2754 aa6.24□□□□□ -1.41
PKNOX1-203ENST00000432907 NDUFAF8A1L188 74 aa6.2□□□□□ -1.42
PKNOX1-203ENST00000432907 MAP1AP78559 2803 aaPredicted RBP6.2□□□□□ -1.42
PKNOX1-203ENST00000432907 CFAP47Q6ZTR5 3102 aa6.2□□□□□ -1.42
PKNOX1-203ENST00000432907 MUC3AQ02505 3323 aa6.18□□□□□ -1.42
PKNOX1-203ENST00000432907 A0A087X002 238 aa6.16□□□□□ -1.42
PKNOX1-203ENST00000432907 NOTCH2NLQ7Z3S9 236 aa6.16□□□□□ -1.42
PKNOX1-203ENST00000432907 COL6A5A8TX70 2615 aa6.16□□□□□ -1.42
PKNOX1-203ENST00000432907 ITPR1Q14643 2758 aa6.15□□□□□ -1.43
PKNOX1-203ENST00000432907 PLAC8Q9NZF1 115 aa6.14□□□□□ -1.43
PKNOX1-203ENST00000432907 S4R3F8 94 aa6.13□□□□□ -1.43
PKNOX1-203ENST00000432907 KALRNO60229 2985 aa6.12□□□□□ -1.43
PKNOX1-203ENST00000432907 R4GN34 69 aa6.11□□□□□ -1.43
PKNOX1-203ENST00000432907 Q6ZSA8 131 aa6.11□□□□□ -1.43
PKNOX1-203ENST00000432907 PANO1I0J062 215 aa6.1□□□□□ -1.43
PKNOX1-203ENST00000432907 BAHCC1Q9P281 2608 aa6.1□□□□□ -1.43
PKNOX1-203ENST00000432907 FLNCQ14315 2725 aa6.09□□□□□ -1.43
PKNOX1-203ENST00000432907 DMXL2Q8TDJ6 3036 aa6.09□□□□□ -1.44
PKNOX1-203ENST00000432907 J3QL48 77 aa6.08□□□□□ -1.44
PKNOX1-203ENST00000432907 KRTAP1-5Q9BYS1 174 aa6.08□□□□□ -1.44
PKNOX1-203ENST00000432907 SMG1Q96Q15 3661 aaKnown RBP6.07□□□□□ -1.44
PKNOX1-203ENST00000432907 BOD1L1Q8NFC6 3051 aa6.06□□□□□ -1.44
PKNOX1-203ENST00000432907 A8MUU9 505 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms