RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 C20orf166-AS1Q96NR2 134 aa10.18□□□□□ -0.78
RIF1-204ENST00000430328 STAB2Q8WWQ8 2551 aa10.17□□□□□ -0.78
RIF1-204ENST00000430328 CYSTM1Q9H1C7 97 aa10.14□□□□□ -0.79
RIF1-204ENST00000430328 SEC61BP60468 96 aaKnown RBP10.13□□□□□ -0.79
RIF1-204ENST00000430328 C10orf142B7Z368 130 aa10.08□□□□□ -0.8
RIF1-204ENST00000430328 Q8NDZ9 215 aa10.07□□□□□ -0.8
RIF1-204ENST00000430328 ADM2Q7Z4H4 148 aa10.06□□□□□ -0.8
RIF1-204ENST00000430328 NDUFAF8A1L188 74 aa10.05□□□□□ -0.8
RIF1-204ENST00000430328 A0A096LNT2 108 aa10.05□□□□□ -0.8
RIF1-204ENST00000430328 LINC00472Q9H8W2 130 aa10.04□□□□□ -0.8
RIF1-204ENST00000430328 SPATA8Q6RVD6 105 aa10.04□□□□□ -0.8
RIF1-204ENST00000430328 KRTAP25-1Q3LHN0 102 aa10.03□□□□□ -0.8
RIF1-204ENST00000430328 ITPR3Q14573 2671 aa9.99□□□□□ -0.81
RIF1-204ENST00000430328 OXTP01178 125 aa9.94□□□□□ -0.82
RIF1-204ENST00000430328 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
RIF1-204ENST00000430328 CHD6Q8TD26 2715 aa9.93□□□□□ -0.82
RIF1-204ENST00000430328 SPRR1AP35321 89 aa9.9□□□□□ -0.83
RIF1-204ENST00000430328 KRTAP10-3P60369 221 aa9.89□□□□□ -0.83
RIF1-204ENST00000430328 PANO1I0J062 215 aa9.88□□□□□ -0.83
RIF1-204ENST00000430328 Q6ZR54 194 aa9.88□□□□□ -0.83
RIF1-204ENST00000430328 FLNAP21333 2647 aaKnown RBP9.86□□□□□ -0.83
RIF1-204ENST00000430328 NOTCH1P46531 2555 aa9.85□□□□□ -0.83
RIF1-204ENST00000430328 SPRR1BP22528 89 aa9.84□□□□□ -0.83
RIF1-204ENST00000430328 KRTAP26-1Q6PEX3 210 aa9.84□□□□□ -0.83
RIF1-204ENST00000430328 CEP350Q5VT06 3117 aa9.83□□□□□ -0.84
RIF1-204ENST00000430328 FLNBO75369 2602 aaKnown RBP9.81□□□□□ -0.84
RIF1-204ENST00000430328 BAHCC1Q9P281 2608 aa9.81□□□□□ -0.84
RIF1-204ENST00000430328 A6NN06 94 aa9.8□□□□□ -0.84
RIF1-204ENST00000430328 C10orf95Q9H7T3 257 aa9.77□□□□□ -0.85
RIF1-204ENST00000430328 UNC79Q9P2D8 2635 aa9.76□□□□□ -0.85
RIF1-204ENST00000430328 COL6A5A8TX70 2615 aa9.75□□□□□ -0.85
RIF1-204ENST00000430328 Q5VSD8 79 aa9.73□□□□□ -0.85
RIF1-204ENST00000430328 A8MUU9 505 aa9.71□□□□□ -0.85
RIF1-204ENST00000430328 TEX15Q9BXT5 2789 aa9.71□□□□□ -0.86
RIF1-204ENST00000430328 TNP1P09430 55 aa9.67□□□□□ -0.86
RIF1-204ENST00000430328 A8MU10 97 aa9.67□□□□□ -0.86
RIF1-204ENST00000430328 NSD1Q96L73 2696 aaPredicted RBP9.64□□□□□ -0.87
RIF1-204ENST00000430328 HELZ2Q9BYK8 2649 aaKnown RBP9.62□□□□□ -0.87
RIF1-204ENST00000430328 C5orf42Q9H799 3197 aa9.58□□□□□ -0.88
RIF1-204ENST00000430328 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
RIF1-204ENST00000430328 PCNTO95613 3336 aa9.56□□□□□ -0.88
RIF1-204ENST00000430328 GCN1Q92616 2671 aaKnown RBP9.56□□□□□ -0.88
RIF1-204ENST00000430328 IGSF10Q6WRI0 2623 aa9.55□□□□□ -0.88
RIF1-204ENST00000430328 CFAP54Q96N23 3096 aa9.48□□□□□ -0.89
RIF1-204ENST00000430328 A0A087X002 238 aa9.48□□□□□ -0.89
RIF1-204ENST00000430328 PP632Q6XCG6 107 aa9.47□□□□□ -0.89
RIF1-204ENST00000430328 KRTAP11-1Q8IUC1 163 aa9.47□□□□□ -0.89
RIF1-204ENST00000430328 A0A0C4DFX4 3053 aa9.46□□□□□ -0.89
RIF1-204ENST00000430328 TEP1Q99973 2627 aaKnown RBP9.41□□□□□ -0.9
RIF1-204ENST00000430328 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
RIF1-204ENST00000430328 GOLGB1Q14789 3259 aaKnown RBP9.38□□□□□ -0.91
RIF1-204ENST00000430328 NOTCH2NLQ7Z3S9 236 aa9.37□□□□□ -0.91
RIF1-204ENST00000430328 KRTAP4-16G5E9R7 235 aaPredicted RBP9.37□□□□□ -0.91
RIF1-204ENST00000430328 APCP25054 2843 aa9.36□□□□□ -0.91
RIF1-204ENST00000430328 KRTAP1-3Q8IUG1 177 aa9.36□□□□□ -0.91
RIF1-204ENST00000430328 KRTAP1-5Q9BYS1 174 aa9.32□□□□□ -0.92
RIF1-204ENST00000430328 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
RIF1-204ENST00000430328 KMT2BQ9UMN6 2715 aaPredicted RBP9.31□□□□□ -0.92
RIF1-204ENST00000430328 KRTAP10-2P60368 255 aa9.31□□□□□ -0.92
RIF1-204ENST00000430328 KRTAP1-1Q07627 177 aa9.3□□□□□ -0.92
RIF1-204ENST00000430328 DNAH12Q6ZR08 3092 aa9.3□□□□□ -0.92
RIF1-204ENST00000430328 LAMA2P24043 3122 aaKnown RBP9.29□□□□□ -0.92
RIF1-204ENST00000430328 ITPR2Q14571 2701 aa9.27□□□□□ -0.93
RIF1-204ENST00000430328 EP400Q96L91 3159 aa9.27□□□□□ -0.93
RIF1-204ENST00000430328 LCE6AA0A183 80 aa9.26□□□□□ -0.93
RIF1-204ENST00000430328 P0C880 135 aa9.26□□□□□ -0.93
RIF1-204ENST00000430328 UTP20O75691 2785 aaKnown RBP9.26□□□□□ -0.93
RIF1-204ENST00000430328 SETXQ7Z333 2677 aaKnown RBP9.25□□□□□ -0.93
RIF1-204ENST00000430328 NBEAL2Q6ZNJ1 2754 aa9.23□□□□□ -0.93
RIF1-204ENST00000430328 KRTAP10-8P60410 259 aa9.19□□□□□ -0.94
RIF1-204ENST00000430328 UBR5O95071 2799 aaPredicted RBP9.17□□□□□ -0.94
RIF1-204ENST00000430328 FREM2Q5SZK8 3169 aa9.16□□□□□ -0.94
RIF1-204ENST00000430328 UTRNP46939 3433 aa9.11□□□□□ -0.95
RIF1-204ENST00000430328 ITPR1Q14643 2758 aa9.09□□□□□ -0.95
RIF1-204ENST00000430328 MAP1AP78559 2803 aaPredicted RBP9.07□□□□□ -0.96
RIF1-204ENST00000430328 ZNF292O60281 2723 aa9.07□□□□□ -0.96
RIF1-204ENST00000430328 DSPP15924 2871 aaKnown RBP9.05□□□□□ -0.96
RIF1-204ENST00000430328 Q6ZRN7 208 aaPredicted RBP9.03□□□□□ -0.96
RIF1-204ENST00000430328 TRANK1O15050 2925 aa8.99□□□□□ -0.97
RIF1-204ENST00000430328 REV3LO60673 3130 aa8.99□□□□□ -0.97
RIF1-204ENST00000430328 FRYQ5TBA9 3013 aa8.95□□□□□ -0.98
RIF1-204ENST00000430328 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
RIF1-204ENST00000430328 H0YAA0 97 aa8.92□□□□□ -0.98
RIF1-204ENST00000430328 LRBAP50851 2863 aa8.91□□□□□ -0.98
RIF1-204ENST00000430328 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
RIF1-204ENST00000430328 TRIOO75962 3097 aa8.86□□□□□ -0.99
RIF1-204ENST00000430328 ASH1LQ9NR48 2969 aaKnown RBP8.85□□□□□ -0.99
RIF1-204ENST00000430328 MGAQ8IWI9 3026 aa8.81□□□□□ -1
RIF1-204ENST00000430328 KALRNO60229 2985 aa8.78□□□□□ -1
RIF1-204ENST00000430328 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
RIF1-204ENST00000430328 PRUNE2Q8WUY3 3088 aa8.77□□□□□ -1.01
RIF1-204ENST00000430328 A0A1B0GVY2 172 aa8.73□□□□□ -1.01
RIF1-204ENST00000430328 CHD9Q3L8U1 2897 aa8.73□□□□□ -1.01
RIF1-204ENST00000430328 FRYLO94915 3013 aa8.72□□□□□ -1.01
RIF1-204ENST00000430328 TENM3Q9P273 2699 aa8.72□□□□□ -1.01
RIF1-204ENST00000430328 COL12A1Q99715 3063 aa8.71□□□□□ -1.01
RIF1-204ENST00000430328 WDFY4Q6ZS81 3184 aa8.7□□□□□ -1.02
RIF1-204ENST00000430328 UNC80Q8N2C7 3258 aa8.69□□□□□ -1.02
RIF1-204ENST00000430328 RANBP2P49792 3224 aaKnown RBP8.69□□□□□ -1.02
RIF1-204ENST00000430328 KRTAP7-1Q8IUC3 87 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms