RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 Q75L30 129 aa5.26□□□□□ -1.57
HPS4-205ENST00000429411 LINC00588Q9Y4M8 146 aa5.26□□□□□ -1.57
HPS4-205ENST00000429411 NDUFC1O43677 76 aa5.25□□□□□ -1.57
HPS4-205ENST00000429411 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
HPS4-205ENST00000429411 Q8N377 158 aa5.25□□□□□ -1.57
HPS4-205ENST00000429411 DHRS4-AS1Q9P1J3 65 aa5.24□□□□□ -1.57
HPS4-205ENST00000429411 ERC2-IT1O76042 136 aa5.23□□□□□ -1.57
HPS4-205ENST00000429411 PRKDCP78527 4128 aaKnown RBP5.23□□□□□ -1.57
HPS4-205ENST00000429411 LY6G6CO95867 125 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 Q6ZRX8 168 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 B9D2Q9BPU9 175 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 A0A087WSZ3 146 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 CHTF8P0CG12 524 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 UBE2AP49459 152 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 LINC01554Q52M75 96 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 PSPHP1O15172 72 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 ANK2Q01484 3957 aa5.22□□□□□ -1.57
HPS4-205ENST00000429411 H3BNG1 76 aa5.21□□□□□ -1.58
HPS4-205ENST00000429411 KRTAP26-1Q6PEX3 210 aa5.2□□□□□ -1.58
HPS4-205ENST00000429411 Q9BRP9 147 aa5.2□□□□□ -1.58
HPS4-205ENST00000429411 KCNQ1DNQ9H478 68 aa5.2□□□□□ -1.58
HPS4-205ENST00000429411 IGKV4-1P06312 121 aa5.2□□□□□ -1.58
HPS4-205ENST00000429411 C7orf65Q6ZTY9 151 aa5.2□□□□□ -1.58
HPS4-205ENST00000429411 RPL37AP61513 92 aaKnown RBP5.2□□□□□ -1.58
HPS4-205ENST00000429411 A0A1W2PNM2 257 aa5.19□□□□□ -1.58
HPS4-205ENST00000429411 SRRM2Q9UQ35 2752 aaKnown RBP5.19□□□□□ -1.58
HPS4-205ENST00000429411 K7EQZ3 153 aa5.19□□□□□ -1.58
HPS4-205ENST00000429411 DNAH10OSP0CZ25 163 aa5.19□□□□□ -1.58
HPS4-205ENST00000429411 WWC2-AS2Q96NR7 200 aa5.19□□□□□ -1.58
HPS4-205ENST00000429411 IGLV1-50A0A075B6I6 118 aa5.18□□□□□ -1.58
HPS4-205ENST00000429411 LINC00476Q8WZB0 136 aa5.18□□□□□ -1.58
HPS4-205ENST00000429411 PLA2G1BP04054 148 aaKnown RBP5.18□□□□□ -1.58
HPS4-205ENST00000429411 PHF5AQ7RTV0 110 aaKnown RBP5.18□□□□□ -1.58
HPS4-205ENST00000429411 Q8NBF4 154 aa5.18□□□□□ -1.58
HPS4-205ENST00000429411 IGLV9-49A0A0B4J1Y8 123 aa5.17□□□□□ -1.58
HPS4-205ENST00000429411 IGHV6-1A0A0B4J1U7 121 aa5.16□□□□□ -1.58
HPS4-205ENST00000429411 LINC00208Q96KT6 92 aa5.16□□□□□ -1.58
HPS4-205ENST00000429411 FAM229BQ4G0N7 80 aa5.14□□□□□ -1.59
HPS4-205ENST00000429411 HCG22E2RYF7 251 aa5.13□□□□□ -1.59
HPS4-205ENST00000429411 IGFL1Q6UW32 110 aa5.13□□□□□ -1.59
HPS4-205ENST00000429411 IGLV5-48A0A075B6I7 105 aa5.12□□□□□ -1.59
HPS4-205ENST00000429411 RETNLBQ9BQ08 111 aa5.12□□□□□ -1.59
HPS4-205ENST00000429411 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
HPS4-205ENST00000429411 CSMD3Q7Z407 3707 aa5.12□□□□□ -1.59
HPS4-205ENST00000429411 A8MU10 97 aa5.11□□□□□ -1.59
HPS4-205ENST00000429411 CDK2AP2O75956 126 aa5.11□□□□□ -1.59
HPS4-205ENST00000429411 SPINK6Q6UWN8 80 aa5.1□□□□□ -1.59
HPS4-205ENST00000429411 KRTAP1-5Q9BYS1 174 aa5.1□□□□□ -1.59
HPS4-205ENST00000429411 FAM229AH3BQW9 127 aa5.1□□□□□ -1.59
HPS4-205ENST00000429411 DSCR10P59022 87 aa5.1□□□□□ -1.59
HPS4-205ENST00000429411 Q1T7F1 81 aa5.1□□□□□ -1.59
HPS4-205ENST00000429411 CASC2Q6XLA1 102 aa5.1□□□□□ -1.59
HPS4-205ENST00000429411 CHKB-CPT1BH3BT56 60 aa5.09□□□□□ -1.59
HPS4-205ENST00000429411 TLX1NBP0CAT3 122 aa5.09□□□□□ -1.59
HPS4-205ENST00000429411 NDUFB1O75438 58 aa5.09□□□□□ -1.59
HPS4-205ENST00000429411 KRTAP7-1Q8IUC3 87 aa5.09□□□□□ -1.59
HPS4-205ENST00000429411 PRAC1Q96KF2 57 aa5.09□□□□□ -1.59
HPS4-205ENST00000429411 C16orf90A8MZG2 172 aa5.09□□□□□ -1.6
HPS4-205ENST00000429411 PCOTHQ58A44 107 aa5.09□□□□□ -1.6
HPS4-205ENST00000429411 SEC61BP60468 96 aaKnown RBP5.08□□□□□ -1.6
HPS4-205ENST00000429411 ATP11AUNQ6ZP68 121 aa5.08□□□□□ -1.6
HPS4-205ENST00000429411 C14orf177Q52M58 125 aa5.07□□□□□ -1.6
HPS4-205ENST00000429411 H0Y9P7 68 aa5.07□□□□□ -1.6
HPS4-205ENST00000429411 A6NED7 52 aa5.07□□□□□ -1.6
HPS4-205ENST00000429411 ANAPC11Q9NYG5 84 aa5.06□□□□□ -1.6
HPS4-205ENST00000429411 ADM2Q7Z4H4 148 aa5.06□□□□□ -1.6
HPS4-205ENST00000429411 KRTAP4-16G5E9R7 235 aaPredicted RBP5.05□□□□□ -1.6
HPS4-205ENST00000429411 SPRR1AP35321 89 aa5.05□□□□□ -1.6
HPS4-205ENST00000429411 C1orf64Q8NEQ6 169 aa5.05□□□□□ -1.6
HPS4-205ENST00000429411 NUPR2A6NF83 97 aa5.04□□□□□ -1.6
HPS4-205ENST00000429411 SPRR4Q96PI1 79 aa5.03□□□□□ -1.6
HPS4-205ENST00000429411 hDV103S1A0JD37 113 aa5.03□□□□□ -1.6
HPS4-205ENST00000429411 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
HPS4-205ENST00000429411 CMYA5Q8N3K9 4069 aa5.03□□□□□ -1.6
HPS4-205ENST00000429411 IGLV5-37A0A075B6J1 123 aa5.03□□□□□ -1.6
HPS4-205ENST00000429411 A6NN06 94 aa5.03□□□□□ -1.6
HPS4-205ENST00000429411 TRAV22A0A0B4J277 110 aa5.02□□□□□ -1.61
HPS4-205ENST00000429411 MOBPQ13875 183 aa5.02□□□□□ -1.61
HPS4-205ENST00000429411 KMT2CQ8NEZ4 4911 aaKnown RBP5.01□□□□□ -1.61
HPS4-205ENST00000429411 NBDYA0A0U1RRE5 68 aa5.01□□□□□ -1.61
HPS4-205ENST00000429411 A0A1B0GW54 56 aa5□□□□□ -1.61
HPS4-205ENST00000429411 PANO1I0J062 215 aa5□□□□□ -1.61
HPS4-205ENST00000429411 FLG2Q5D862 2391 aaPredicted RBP5□□□□□ -1.61
HPS4-205ENST00000429411 CIRBP-AS1Q8TBR5 109 aa5□□□□□ -1.61
HPS4-205ENST00000429411 DNAH9Q9NYC9 4486 aa5□□□□□ -1.61
HPS4-205ENST00000429411 KRTAP16-1A8MUX0 517 aa4.99□□□□□ -1.61
HPS4-205ENST00000429411 C9orf163Q8N9P6 203 aa4.99□□□□□ -1.61
HPS4-205ENST00000429411 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
HPS4-205ENST00000429411 APLNQ9ULZ1 77 aa4.98□□□□□ -1.61
HPS4-205ENST00000429411 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
HPS4-205ENST00000429411 A8MWP4 228 aa4.98□□□□□ -1.61
HPS4-205ENST00000429411 CNBPP62633 177 aaKnown RBP4.98□□□□□ -1.61
HPS4-205ENST00000429411 HUWE1Q7Z6Z7 4374 aaKnown RBP4.97□□□□□ -1.61
HPS4-205ENST00000429411 C1orf134Q5TEV5 83 aa4.97□□□□□ -1.61
HPS4-205ENST00000429411 DNAH3Q8TD57 4116 aa4.97□□□□□ -1.61
HPS4-205ENST00000429411 DMBT1Q9UGM3 2413 aaPredicted RBP4.95□□□□□ -1.62
HPS4-205ENST00000429411 IGLV5-52A0A0A0MRZ9 124 aa4.95□□□□□ -1.62
HPS4-205ENST00000429411 LCE6AA0A183 80 aa4.94□□□□□ -1.62
HPS4-205ENST00000429411 RTL8CO15255 209 aa4.94□□□□□ -1.62
HPS4-205ENST00000429411 SPAG11AQ6PDA7 123 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms