RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ITPR2Q14571 2701 aa6.25□□□□□ -1.41
SNX13-203ENST00000428135 LINC00336Q6ZUF6 198 aa6.25□□□□□ -1.41
SNX13-203ENST00000428135 C8orf17Q9NRJ1 99 aa6.25□□□□□ -1.41
SNX13-203ENST00000428135 LOC400499M0QZD8 3231 aa6.25□□□□□ -1.41
SNX13-203ENST00000428135 C8orf87E5RJ46 101 aa6.24□□□□□ -1.41
SNX13-203ENST00000428135 KALRNO60229 2985 aa6.23□□□□□ -1.41
SNX13-203ENST00000428135 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
SNX13-203ENST00000428135 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
SNX13-203ENST00000428135 IGLV5-37A0A075B6J1 123 aa6.23□□□□□ -1.41
SNX13-203ENST00000428135 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
SNX13-203ENST00000428135 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
SNX13-203ENST00000428135 A0A1B0GW54 56 aa6.22□□□□□ -1.41
SNX13-203ENST00000428135 SSBP3-AS1Q7Z2R9 100 aa6.22□□□□□ -1.41
SNX13-203ENST00000428135 UTP20O75691 2785 aaKnown RBP6.21□□□□□ -1.41
SNX13-203ENST00000428135 SPRR4Q96PI1 79 aa6.21□□□□□ -1.41
SNX13-203ENST00000428135 PRR15Q8IV56 129 aa6.21□□□□□ -1.42
SNX13-203ENST00000428135 PRR26Q8N8Z3 221 aa6.21□□□□□ -1.42
SNX13-203ENST00000428135 LOC101927531A0A1B0GV80 90 aa6.2□□□□□ -1.42
SNX13-203ENST00000428135 Q8N1X5 172 aa6.2□□□□□ -1.42
SNX13-203ENST00000428135 TLX1NBP0CAT3 122 aa6.2□□□□□ -1.42
SNX13-203ENST00000428135 LINC01600Q96MT4 127 aa6.2□□□□□ -1.42
SNX13-203ENST00000428135 NBEAL2Q6ZNJ1 2754 aa6.2□□□□□ -1.42
SNX13-203ENST00000428135 CNBPP62633 177 aaKnown RBP6.19□□□□□ -1.42
SNX13-203ENST00000428135 COA5Q86WW8 74 aa6.19□□□□□ -1.42
SNX13-203ENST00000428135 HIVEP1P15822 2718 aa6.19□□□□□ -1.42
SNX13-203ENST00000428135 H3BPC8 53 aa6.16□□□□□ -1.42
SNX13-203ENST00000428135 A0A0D9SG42 100 aa6.16□□□□□ -1.42
SNX13-203ENST00000428135 PLA2G2DQ9UNK4 145 aa6.16□□□□□ -1.42
SNX13-203ENST00000428135 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.42
SNX13-203ENST00000428135 A0A1W2PNM2 257 aa6.15□□□□□ -1.42
SNX13-203ENST00000428135 ASPMQ8IZT6 3477 aa6.15□□□□□ -1.43
SNX13-203ENST00000428135 MUC3AQ02505 3323 aa6.14□□□□□ -1.43
SNX13-203ENST00000428135 IGLV5-48A0A075B6I7 105 aa6.14□□□□□ -1.43
SNX13-203ENST00000428135 A8MUN3 132 aa6.14□□□□□ -1.43
SNX13-203ENST00000428135 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
SNX13-203ENST00000428135 WDFY3Q8IZQ1 3526 aa6.13□□□□□ -1.43
SNX13-203ENST00000428135 WIPF1O43516 503 aa6.13□□□□□ -1.43
SNX13-203ENST00000428135 M0R2T5 61 aa6.12□□□□□ -1.43
SNX13-203ENST00000428135 LAMA5O15230 3695 aa6.11□□□□□ -1.43
SNX13-203ENST00000428135 IGLV7-46A0A075B6I9 117 aa6.11□□□□□ -1.43
SNX13-203ENST00000428135 RELNP78509 3460 aa6.11□□□□□ -1.43
SNX13-203ENST00000428135 SPINT4Q6UDR6 99 aa6.1□□□□□ -1.43
SNX13-203ENST00000428135 Q6ZSA8 131 aa6.1□□□□□ -1.43
SNX13-203ENST00000428135 APCP25054 2843 aa6.09□□□□□ -1.43
SNX13-203ENST00000428135 TENM4Q6N022 2769 aa6.08□□□□□ -1.44
SNX13-203ENST00000428135 DMDP11532 3685 aa6.08□□□□□ -1.44
SNX13-203ENST00000428135 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
SNX13-203ENST00000428135 DCHS1Q96JQ0 3298 aa6.07□□□□□ -1.44
SNX13-203ENST00000428135 KRTAP1-5Q9BYS1 174 aa6.06□□□□□ -1.44
SNX13-203ENST00000428135 ASH1LQ9NR48 2969 aaKnown RBP6.05□□□□□ -1.44
SNX13-203ENST00000428135 FAM104AQ969W3 186 aa6.04□□□□□ -1.44
SNX13-203ENST00000428135 UQCR11O14957 56 aa6.04□□□□□ -1.44
SNX13-203ENST00000428135 Q8NDZ9 215 aa6.04□□□□□ -1.44
SNX13-203ENST00000428135 LCE6AA0A183 80 aa6.03□□□□□ -1.44
SNX13-203ENST00000428135 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
SNX13-203ENST00000428135 CELSR2Q9HCU4 2923 aa6.03□□□□□ -1.44
SNX13-203ENST00000428135 KRTAP10-2P60368 255 aa6.02□□□□□ -1.45
SNX13-203ENST00000428135 PRO0628Q9UI54 55 aa6.02□□□□□ -1.45
SNX13-203ENST00000428135 ZANQ9Y493 2812 aa6.02□□□□□ -1.45
SNX13-203ENST00000428135 KMT2BQ9UMN6 2715 aaPredicted RBP6.01□□□□□ -1.45
SNX13-203ENST00000428135 Q5VSD8 79 aa6.01□□□□□ -1.45
SNX13-203ENST00000428135 NIPBLQ6KC79 2804 aaeCLIP6.01□□□□□ -1.45
SNX13-203ENST00000428135 KRTAP10-1P60331 282 aa5.99□□□□□ -1.45
SNX13-203ENST00000428135 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
SNX13-203ENST00000428135 PLAC8Q9NZF1 115 aa5.98□□□□□ -1.45
SNX13-203ENST00000428135 RPS28P62857 69 aaKnown RBP5.96□□□□□ -1.45
SNX13-203ENST00000428135 H7BZZ5 65 aa5.96□□□□□ -1.46
SNX13-203ENST00000428135 KLKP1Q107X0 134 aa5.95□□□□□ -1.46
SNX13-203ENST00000428135 DCHS2Q6V1P9 2916 aa5.94□□□□□ -1.46
SNX13-203ENST00000428135 NBPF19A0A087WUL8 3843 aa5.91□□□□□ -1.46
SNX13-203ENST00000428135 PANO1I0J062 215 aa5.91□□□□□ -1.46
SNX13-203ENST00000428135 HRES1P13985 223 aa5.91□□□□□ -1.46
SNX13-203ENST00000428135 Q8N9P0 234 aaPredicted RBP5.91□□□□□ -1.46
SNX13-203ENST00000428135 ZFHX4Q86UP3 3567 aa5.91□□□□□ -1.46
SNX13-203ENST00000428135 CD164Q04900 197 aa5.91□□□□□ -1.46
SNX13-203ENST00000428135 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
SNX13-203ENST00000428135 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
SNX13-203ENST00000428135 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
SNX13-203ENST00000428135 DMBT1Q9UGM3 2413 aaPredicted RBP5.89□□□□□ -1.47
SNX13-203ENST00000428135 FAM229BQ4G0N7 80 aa5.88□□□□□ -1.47
SNX13-203ENST00000428135 ZCCHC13Q8WW36 166 aaKnown RBP5.87□□□□□ -1.47
SNX13-203ENST00000428135 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
SNX13-203ENST00000428135 FBN2P35556 2912 aa5.86□□□□□ -1.47
SNX13-203ENST00000428135 HRNRQ86YZ3 2850 aaPredicted RBP5.86□□□□□ -1.47
SNX13-203ENST00000428135 MMP24-AS1A0A0U1RRL7 71 aa5.85□□□□□ -1.47
SNX13-203ENST00000428135 CDC42SE1Q9NRR8 79 aa5.85□□□□□ -1.47
SNX13-203ENST00000428135 KRTAP26-1Q6PEX3 210 aa5.85□□□□□ -1.47
SNX13-203ENST00000428135 S4R3F8 94 aa5.85□□□□□ -1.47
SNX13-203ENST00000428135 NF1P21359 2839 aa5.85□□□□□ -1.47
SNX13-203ENST00000428135 SPRR1AP35321 89 aa5.84□□□□□ -1.47
SNX13-203ENST00000428135 SPINK7P58062 85 aa5.84□□□□□ -1.48
SNX13-203ENST00000428135 SMG1Q96Q15 3661 aaKnown RBP5.83□□□□□ -1.48
SNX13-203ENST00000428135 ZFHX3Q15911 3703 aa5.83□□□□□ -1.48
SNX13-203ENST00000428135 SPANXA2-OT1Q8N9U9 137 aa5.82□□□□□ -1.48
SNX13-203ENST00000428135 A0A1B0GU33 70 aa5.81□□□□□ -1.48
SNX13-203ENST00000428135 Q5W150 140 aa5.81□□□□□ -1.48
SNX13-203ENST00000428135 CSAG1Q6PB30 78 aa5.8□□□□□ -1.48
SNX13-203ENST00000428135 A0A087X002 238 aa5.78□□□□□ -1.48
SNX13-203ENST00000428135 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
SNX13-203ENST00000428135 KRTAP21-3Q3LHN1 58 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms