RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 NUPR2A6NF83 97 aa3.35□□□□□ -1.87
VTI1BP4-201ENST00000427516 IGKV2-30P06310 120 aa3.35□□□□□ -1.87
VTI1BP4-201ENST00000427516 KRTAP1-1Q07627 177 aa3.35□□□□□ -1.87
VTI1BP4-201ENST00000427516 C2CD3Q4AC94 2353 aa3.34□□□□□ -1.87
VTI1BP4-201ENST00000427516 SPTAN1Q13813 2472 aaKnown RBP3.34□□□□□ -1.87
VTI1BP4-201ENST00000427516 KMT2BQ9UMN6 2715 aaPredicted RBP3.34□□□□□ -1.87
VTI1BP4-201ENST00000427516 IGLV5-52A0A0A0MRZ9 124 aa3.34□□□□□ -1.87
VTI1BP4-201ENST00000427516 CHTF8P0CG12 524 aa3.34□□□□□ -1.87
VTI1BP4-201ENST00000427516 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
VTI1BP4-201ENST00000427516 TTC28Q96AY4 2481 aa3.34□□□□□ -1.88
VTI1BP4-201ENST00000427516 HRNRQ86YZ3 2850 aaPredicted RBP3.33□□□□□ -1.88
VTI1BP4-201ENST00000427516 KRTAP16-1A8MUX0 517 aa3.33□□□□□ -1.88
VTI1BP4-201ENST00000427516 KRTAP7-1Q8IUC3 87 aa3.33□□□□□ -1.88
VTI1BP4-201ENST00000427516 ANKRD11Q6UB99 2663 aaPredicted RBP3.33□□□□□ -1.88
VTI1BP4-201ENST00000427516 IGKV2D-30A0A075B6S6 120 aa3.32□□□□□ -1.88
VTI1BP4-201ENST00000427516 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
VTI1BP4-201ENST00000427516 A0A0G2JQZ4 141 aa3.32□□□□□ -1.88
VTI1BP4-201ENST00000427516 A0A1W2PNN7 141 aa3.32□□□□□ -1.88
VTI1BP4-201ENST00000427516 Q5W150 140 aa3.32□□□□□ -1.88
VTI1BP4-201ENST00000427516 A0A096LNI7 61 aa3.31□□□□□ -1.88
VTI1BP4-201ENST00000427516 IGLV9-49A0A0B4J1Y8 123 aa3.31□□□□□ -1.88
VTI1BP4-201ENST00000427516 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
VTI1BP4-201ENST00000427516 LRBAP50851 2863 aa3.31□□□□□ -1.88
VTI1BP4-201ENST00000427516 OTOGLQ3ZCN5 2332 aa3.31□□□□□ -1.88
VTI1BP4-201ENST00000427516 SPINT4Q6UDR6 99 aa3.3□□□□□ -1.88
VTI1BP4-201ENST00000427516 DMDP11532 3685 aa3.3□□□□□ -1.88
VTI1BP4-201ENST00000427516 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
VTI1BP4-201ENST00000427516 ATRXP46100 2492 aa3.29□□□□□ -1.88
VTI1BP4-201ENST00000427516 SPTA1P02549 2419 aa3.29□□□□□ -1.88
VTI1BP4-201ENST00000427516 COX6B2Q6YFQ2 88 aa3.29□□□□□ -1.88
VTI1BP4-201ENST00000427516 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
VTI1BP4-201ENST00000427516 EYSQ5T1H1 3165 aa3.28□□□□□ -1.88
VTI1BP4-201ENST00000427516 A0A1B0GU33 70 aa3.28□□□□□ -1.88
VTI1BP4-201ENST00000427516 LINC00304Q8N9R0 145 aa3.28□□□□□ -1.88
VTI1BP4-201ENST00000427516 DCHS2Q6V1P9 2916 aa3.28□□□□□ -1.88
VTI1BP4-201ENST00000427516 TLN1Q9Y490 2541 aaKnown RBP3.28□□□□□ -1.88
VTI1BP4-201ENST00000427516 PANO1I0J062 215 aa3.27□□□□□ -1.89
VTI1BP4-201ENST00000427516 SSBP3-AS1Q7Z2R9 100 aa3.27□□□□□ -1.89
VTI1BP4-201ENST00000427516 C20orf166-AS1Q96NR2 134 aa3.27□□□□□ -1.89
VTI1BP4-201ENST00000427516 CHD6Q8TD26 2715 aa3.27□□□□□ -1.89
VTI1BP4-201ENST00000427516 CELSR1Q9NYQ6 3014 aa3.26□□□□□ -1.89
VTI1BP4-201ENST00000427516 LOC400499M0QZD8 3231 aa3.25□□□□□ -1.89
VTI1BP4-201ENST00000427516 BOD1L1Q8NFC6 3051 aa3.25□□□□□ -1.89
VTI1BP4-201ENST00000427516 KRTAP11-1Q8IUC1 163 aa3.25□□□□□ -1.89
VTI1BP4-201ENST00000427516 SMG1Q96Q15 3661 aaKnown RBP3.24□□□□□ -1.89
VTI1BP4-201ENST00000427516 NCOR2Q9Y618 2525 aa3.24□□□□□ -1.89
VTI1BP4-201ENST00000427516 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
VTI1BP4-201ENST00000427516 CASC10Q5T4H9 136 aa3.24□□□□□ -1.89
VTI1BP4-201ENST00000427516 SPINK6Q6UWN8 80 aa3.24□□□□□ -1.89
VTI1BP4-201ENST00000427516 NBASA2RRP1 2371 aa3.24□□□□□ -1.89
VTI1BP4-201ENST00000427516 TLN2Q9Y4G6 2542 aa3.23□□□□□ -1.89
VTI1BP4-201ENST00000427516 SPENQ96T58 3664 aaKnown RBP3.23□□□□□ -1.89
VTI1BP4-201ENST00000427516 CSMD1Q96PZ7 3565 aa3.23□□□□□ -1.89
VTI1BP4-201ENST00000427516 CSPG4Q6UVK1 2322 aa3.22□□□□□ -1.89
VTI1BP4-201ENST00000427516 SPG11Q96JI7 2443 aa3.22□□□□□ -1.89
VTI1BP4-201ENST00000427516 ZFHX4Q86UP3 3567 aa3.22□□□□□ -1.89
VTI1BP4-201ENST00000427516 H0YAA0 97 aa3.22□□□□□ -1.89
VTI1BP4-201ENST00000427516 P0C880 135 aa3.22□□□□□ -1.89
VTI1BP4-201ENST00000427516 BDP1A6H8Y1 2624 aa3.22□□□□□ -1.89
VTI1BP4-201ENST00000427516 K7EIL1 84 aa3.21□□□□□ -1.9
VTI1BP4-201ENST00000427516 SEC61BP60468 96 aaKnown RBP3.21□□□□□ -1.9
VTI1BP4-201ENST00000427516 Q6ZSA8 131 aa3.21□□□□□ -1.9
VTI1BP4-201ENST00000427516 CRIPTQ9P021 101 aa3.21□□□□□ -1.9
VTI1BP4-201ENST00000427516 PSORS1C2Q9UIG4 136 aa3.21□□□□□ -1.9
VTI1BP4-201ENST00000427516 HIVEP3Q5T1R4 2406 aa3.2□□□□□ -1.9
VTI1BP4-201ENST00000427516 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
VTI1BP4-201ENST00000427516 UBE2DNLQ8IWF7 75 aa3.2□□□□□ -1.9
VTI1BP4-201ENST00000427516 ITPR1Q14643 2758 aa3.2□□□□□ -1.9
VTI1BP4-201ENST00000427516 MUC6Q6W4X9 2439 aa3.2□□□□□ -1.9
VTI1BP4-201ENST00000427516 SETXQ7Z333 2677 aaKnown RBP3.19□□□□□ -1.9
VTI1BP4-201ENST00000427516 MYO9AB2RTY4 2548 aa3.19□□□□□ -1.9
VTI1BP4-201ENST00000427516 A0A087WTM6 91 aa3.19□□□□□ -1.9
VTI1BP4-201ENST00000427516 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
VTI1BP4-201ENST00000427516 RIF1Q5UIP0 2472 aaKnown RBP3.19□□□□□ -1.9
VTI1BP4-201ENST00000427516 ASH1LQ9NR48 2969 aaKnown RBP3.18□□□□□ -1.9
VTI1BP4-201ENST00000427516 BSNQ9UPA5 3926 aa3.18□□□□□ -1.9
VTI1BP4-201ENST00000427516 DMXL1Q9Y485 3027 aa3.18□□□□□ -1.9
VTI1BP4-201ENST00000427516 SPINK1P00995 79 aa3.18□□□□□ -1.9
VTI1BP4-201ENST00000427516 RPL37P61927 97 aaKnown RBP3.18□□□□□ -1.9
VTI1BP4-201ENST00000427516 SPACA4Q8TDM5 124 aa3.18□□□□□ -1.9
VTI1BP4-201ENST00000427516 ATMQ13315 3056 aa3.17□□□□□ -1.9
VTI1BP4-201ENST00000427516 CEP295Q9C0D2 2601 aa3.17□□□□□ -1.9
VTI1BP4-201ENST00000427516 MUC3AQ02505 3323 aa3.17□□□□□ -1.9
VTI1BP4-201ENST00000427516 PIEZO1Q92508 2521 aa3.17□□□□□ -1.9
VTI1BP4-201ENST00000427516 UTP20O75691 2785 aaKnown RBP3.17□□□□□ -1.9
VTI1BP4-201ENST00000427516 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
VTI1BP4-201ENST00000427516 DOPEY1Q5JWR5 2465 aa3.15□□□□□ -1.9
VTI1BP4-201ENST00000427516 ANKRD17O75179 2603 aaKnown RBP3.15□□□□□ -1.9
VTI1BP4-201ENST00000427516 ALMS1Q8TCU4 4167 aa3.15□□□□□ -1.9
VTI1BP4-201ENST00000427516 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.9
VTI1BP4-201ENST00000427516 COL12A1Q99715 3063 aa3.15□□□□□ -1.9
VTI1BP4-201ENST00000427516 JMJD1CQ15652 2540 aa3.15□□□□□ -1.91
VTI1BP4-201ENST00000427516 KRTAP10-3P60369 221 aa3.15□□□□□ -1.91
VTI1BP4-201ENST00000427516 SPTBN4Q9H254 2564 aa3.13□□□□□ -1.91
VTI1BP4-201ENST00000427516 GVINP1Q7Z2Y8 2422 aa3.13□□□□□ -1.91
VTI1BP4-201ENST00000427516 ASPMQ8IZT6 3477 aa3.13□□□□□ -1.91
VTI1BP4-201ENST00000427516 ZNF292O60281 2723 aa3.13□□□□□ -1.91
VTI1BP4-201ENST00000427516 TENM2Q9NT68 2774 aa3.12□□□□□ -1.91
VTI1BP4-201ENST00000427516 GCN1Q92616 2671 aaKnown RBP3.12□□□□□ -1.91
VTI1BP4-201ENST00000427516 CRYBG3Q68DQ2 2970 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms