RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 A0A096LNI7 61 aa4.76□□□□□ -1.65
SMARCC1-202ENST00000425518 HCG22E2RYF7 251 aa4.76□□□□□ -1.65
SMARCC1-202ENST00000425518 RPL37AP61513 92 aaKnown RBP4.76□□□□□ -1.65
SMARCC1-202ENST00000425518 PKIGQ9Y2B9 76 aa4.75□□□□□ -1.65
SMARCC1-202ENST00000425518 UBE2AP49459 152 aa4.75□□□□□ -1.65
SMARCC1-202ENST00000425518 DNHD1Q96M86 4753 aa4.74□□□□□ -1.65
SMARCC1-202ENST00000425518 CHTF8P0CG12 524 aa4.74□□□□□ -1.65
SMARCC1-202ENST00000425518 C1orf64Q8NEQ6 169 aa4.74□□□□□ -1.65
SMARCC1-202ENST00000425518 CSMD3Q7Z407 3707 aa4.73□□□□□ -1.65
SMARCC1-202ENST00000425518 PHF5AQ7RTV0 110 aaKnown RBP4.73□□□□□ -1.65
SMARCC1-202ENST00000425518 KRTAP1-5Q9BYS1 174 aa4.73□□□□□ -1.65
SMARCC1-202ENST00000425518 C16orf90A8MZG2 172 aa4.73□□□□□ -1.65
SMARCC1-202ENST00000425518 MDFIQ99750 246 aa4.73□□□□□ -1.65
SMARCC1-202ENST00000425518 TENM2Q9NT68 2774 aa4.73□□□□□ -1.65
SMARCC1-202ENST00000425518 LCE6AA0A183 80 aa4.72□□□□□ -1.65
SMARCC1-202ENST00000425518 hDV103S1A0JD37 113 aa4.72□□□□□ -1.65
SMARCC1-202ENST00000425518 UBE2DNLQ8IWF7 75 aa4.72□□□□□ -1.65
SMARCC1-202ENST00000425518 LINC00208Q96KT6 92 aa4.72□□□□□ -1.65
SMARCC1-202ENST00000425518 ZCCHC13Q8WW36 166 aaKnown RBP4.72□□□□□ -1.65
SMARCC1-202ENST00000425518 MP68P56378 58 aa4.71□□□□□ -1.65
SMARCC1-202ENST00000425518 K7EIL1 84 aa4.71□□□□□ -1.66
SMARCC1-202ENST00000425518 KRTAP11-1Q8IUC1 163 aa4.71□□□□□ -1.66
SMARCC1-202ENST00000425518 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.66
SMARCC1-202ENST00000425518 PSPHP1O15172 72 aa4.69□□□□□ -1.66
SMARCC1-202ENST00000425518 CASC2Q6XLA1 102 aa4.69□□□□□ -1.66
SMARCC1-202ENST00000425518 HUWE1Q7Z6Z7 4374 aaKnown RBP4.68□□□□□ -1.66
SMARCC1-202ENST00000425518 H0Y9J4 135 aa4.68□□□□□ -1.66
SMARCC1-202ENST00000425518 CNBPP62633 177 aaKnown RBP4.68□□□□□ -1.66
SMARCC1-202ENST00000425518 DNAH1Q9P2D7 4330 aa4.68□□□□□ -1.66
SMARCC1-202ENST00000425518 IGLV8-61A0A075B6I0 122 aa4.68□□□□□ -1.66
SMARCC1-202ENST00000425518 H0Y9P7 68 aa4.67□□□□□ -1.66
SMARCC1-202ENST00000425518 NDUFB1O75438 58 aa4.67□□□□□ -1.66
SMARCC1-202ENST00000425518 PRR15Q8IV56 129 aa4.67□□□□□ -1.66
SMARCC1-202ENST00000425518 TRAV22A0A0B4J277 110 aa4.66□□□□□ -1.66
SMARCC1-202ENST00000425518 COL7A1Q02388 2944 aa4.66□□□□□ -1.66
SMARCC1-202ENST00000425518 KRTAP29-1A8MX34 341 aaPredicted RBP4.65□□□□□ -1.66
SMARCC1-202ENST00000425518 LYSTQ99698 3801 aa4.65□□□□□ -1.66
SMARCC1-202ENST00000425518 B9D2Q9BPU9 175 aa4.65□□□□□ -1.66
SMARCC1-202ENST00000425518 DNAH3Q8TD57 4116 aa4.65□□□□□ -1.66
SMARCC1-202ENST00000425518 A8MWP4 228 aa4.65□□□□□ -1.67
SMARCC1-202ENST00000425518 C14orf177Q52M58 125 aa4.65□□□□□ -1.67
SMARCC1-202ENST00000425518 CYP4F30PQ9H0H9 118 aa4.65□□□□□ -1.67
SMARCC1-202ENST00000425518 IGLV9-49A0A0B4J1Y8 123 aa4.64□□□□□ -1.67
SMARCC1-202ENST00000425518 LINC00472Q9H8W2 130 aa4.64□□□□□ -1.67
SMARCC1-202ENST00000425518 Q1T7F1 81 aa4.64□□□□□ -1.67
SMARCC1-202ENST00000425518 PANO1I0J062 215 aa4.64□□□□□ -1.67
SMARCC1-202ENST00000425518 C1orf195Q5TG92 126 aa4.63□□□□□ -1.67
SMARCC1-202ENST00000425518 A8MUN3 132 aa4.63□□□□□ -1.67
SMARCC1-202ENST00000425518 C9orf163Q8N9P6 203 aa4.63□□□□□ -1.67
SMARCC1-202ENST00000425518 SPRR1BP22528 89 aa4.62□□□□□ -1.67
SMARCC1-202ENST00000425518 APLNQ9ULZ1 77 aa4.62□□□□□ -1.67
SMARCC1-202ENST00000425518 DNAH9Q9NYC9 4486 aa4.62□□□□□ -1.67
SMARCC1-202ENST00000425518 KRTAP21-3Q3LHN1 58 aa4.61□□□□□ -1.67
SMARCC1-202ENST00000425518 PCOTHQ58A44 107 aa4.61□□□□□ -1.67
SMARCC1-202ENST00000425518 NDUFS5O43920 106 aa4.6□□□□□ -1.67
SMARCC1-202ENST00000425518 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.67
SMARCC1-202ENST00000425518 NBDYA0A0U1RRE5 68 aa4.59□□□□□ -1.68
SMARCC1-202ENST00000425518 H3BPC8 53 aa4.59□□□□□ -1.68
SMARCC1-202ENST00000425518 ANAPC11Q9NYG5 84 aa4.58□□□□□ -1.68
SMARCC1-202ENST00000425518 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.58□□□□□ -1.68
SMARCC1-202ENST00000425518 IGHV6-1A0A0B4J1U7 121 aa4.58□□□□□ -1.68
SMARCC1-202ENST00000425518 SPANXA2-OT1Q8N9U9 137 aa4.58□□□□□ -1.68
SMARCC1-202ENST00000425518 V9GYY9 64 aa4.58□□□□□ -1.68
SMARCC1-202ENST00000425518 CHKB-CPT1BH3BT56 60 aa4.57□□□□□ -1.68
SMARCC1-202ENST00000425518 A8MU10 97 aa4.57□□□□□ -1.68
SMARCC1-202ENST00000425518 PRR15LQ9BU68 103 aa4.57□□□□□ -1.68
SMARCC1-202ENST00000425518 CDK2AP2O75956 126 aa4.56□□□□□ -1.68
SMARCC1-202ENST00000425518 KRTAP13-1Q8IUC0 172 aa4.56□□□□□ -1.68
SMARCC1-202ENST00000425518 Q8N9P0 234 aaPredicted RBP4.56□□□□□ -1.68
SMARCC1-202ENST00000425518 MOBPQ13875 183 aa4.56□□□□□ -1.68
SMARCC1-202ENST00000425518 Q5VV11 94 aa4.56□□□□□ -1.68
SMARCC1-202ENST00000425518 COA5Q86WW8 74 aa4.55□□□□□ -1.68
SMARCC1-202ENST00000425518 C8orf17Q9NRJ1 99 aa4.55□□□□□ -1.68
SMARCC1-202ENST00000425518 Q96NJ1 140 aa4.55□□□□□ -1.68
SMARCC1-202ENST00000425518 SEC61GP60059 68 aa4.54□□□□□ -1.68
SMARCC1-202ENST00000425518 PLECQ15149 4684 aaKnown RBP4.54□□□□□ -1.68
SMARCC1-202ENST00000425518 DNAH7Q8WXX0 4024 aa4.54□□□□□ -1.68
SMARCC1-202ENST00000425518 SPINK6Q6UWN8 80 aa4.54□□□□□ -1.68
SMARCC1-202ENST00000425518 Q6ZRN7 208 aaPredicted RBP4.54□□□□□ -1.68
SMARCC1-202ENST00000425518 LIMD2Q9BT23 127 aa4.54□□□□□ -1.68
SMARCC1-202ENST00000425518 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
SMARCC1-202ENST00000425518 CD164Q04900 197 aa4.53□□□□□ -1.68
SMARCC1-202ENST00000425518 SPACA4Q8TDM5 124 aa4.53□□□□□ -1.68
SMARCC1-202ENST00000425518 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
SMARCC1-202ENST00000425518 PSORS1C2Q9UIG4 136 aa4.53□□□□□ -1.68
SMARCC1-202ENST00000425518 A0A087X002 238 aa4.52□□□□□ -1.69
SMARCC1-202ENST00000425518 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
SMARCC1-202ENST00000425518 NOTCH2NLQ7Z3S9 236 aa4.52□□□□□ -1.69
SMARCC1-202ENST00000425518 SPAG11AQ6PDA7 123 aa4.52□□□□□ -1.69
SMARCC1-202ENST00000425518 SPTSSBQ8NFR3 76 aa4.52□□□□□ -1.69
SMARCC1-202ENST00000425518 A0A087WTM6 91 aa4.51□□□□□ -1.69
SMARCC1-202ENST00000425518 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
SMARCC1-202ENST00000425518 A6NED7 52 aa4.51□□□□□ -1.69
SMARCC1-202ENST00000425518 WWC2-AS2Q96NR7 200 aa4.51□□□□□ -1.69
SMARCC1-202ENST00000425518 ZNF706Q9Y5V0 76 aaPredicted RBP4.51□□□□□ -1.69
SMARCC1-202ENST00000425518 NUPR2A6NF83 97 aa4.5□□□□□ -1.69
SMARCC1-202ENST00000425518 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
SMARCC1-202ENST00000425518 RTL8CO15255 209 aa4.5□□□□□ -1.69
SMARCC1-202ENST00000425518 PRKDCP78527 4128 aaKnown RBP4.5□□□□□ -1.69
SMARCC1-202ENST00000425518 LINC00483Q53H64 154 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms