RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SPANXB1Q9NS25 103 aaPredicted RBP3.3□□□□□ -1.88
LINC00458-201ENST00000423442 A0A0J9YXY3 114 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 ZNF815PA8K554 130 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 HSBP1L1C9JCN9 74 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 S100A6P06703 90 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 C3orf79P0CE67 100 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 NPC2P61916 151 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 CTAG1AP78358 180 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 LINC01545Q5VT33 79 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 SPAG11AQ6PDA7 123 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 KRTAP13-1Q8IUC0 172 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 LINC00304Q8N9R0 145 aa3.29□□□□□ -1.88
LINC00458-201ENST00000423442 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
LINC00458-201ENST00000423442 TIMM17BO60830 172 aa3.28□□□□□ -1.88
LINC00458-201ENST00000423442 TSPEAR-AS2P59090 65 aa3.28□□□□□ -1.88
LINC00458-201ENST00000423442 Q8NDZ9 215 aa3.28□□□□□ -1.88
LINC00458-201ENST00000423442 DHRS4-AS1Q9P1J3 65 aa3.28□□□□□ -1.88
LINC00458-201ENST00000423442 CRCT1Q9UGL9 99 aa3.28□□□□□ -1.88
LINC00458-201ENST00000423442 TRAV23DV6A0A075B6W5 121 aa3.27□□□□□ -1.89
LINC00458-201ENST00000423442 ZNF73O43830 326 aaPredicted RBP3.27□□□□□ -1.89
LINC00458-201ENST00000423442 COA6Q5JTJ3 125 aaKnown RBP3.27□□□□□ -1.89
LINC00458-201ENST00000423442 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
LINC00458-201ENST00000423442 LCE1BQ5T7P3 118 aa3.27□□□□□ -1.89
LINC00458-201ENST00000423442 LINC00308Q8TCZ7 52 aa3.27□□□□□ -1.89
LINC00458-201ENST00000423442 SPRR4Q96PI1 79 aa3.27□□□□□ -1.89
LINC00458-201ENST00000423442 SPANXCQ9NY87 97 aa3.27□□□□□ -1.89
LINC00458-201ENST00000423442 IGLV6-57P01721 117 aa3.26□□□□□ -1.89
LINC00458-201ENST00000423442 SPRR1AP35321 89 aa3.26□□□□□ -1.89
LINC00458-201ENST00000423442 KRTAP13-2Q52LG2 175 aa3.26□□□□□ -1.89
LINC00458-201ENST00000423442 SLC25A34Q6PIV7 304 aa3.26□□□□□ -1.89
LINC00458-201ENST00000423442 Q6ZRX8 168 aa3.26□□□□□ -1.89
LINC00458-201ENST00000423442 Q6ZVH6 145 aa3.26□□□□□ -1.89
LINC00458-201ENST00000423442 SSBP3-AS1Q7Z2R9 100 aa3.26□□□□□ -1.89
LINC00458-201ENST00000423442 MUC17Q685J3 4493 aa3.25□□□□□ -1.89
LINC00458-201ENST00000423442 A6NDN8 102 aa3.25□□□□□ -1.89
LINC00458-201ENST00000423442 IFITM1P13164 125 aa3.25□□□□□ -1.89
LINC00458-201ENST00000423442 VAMP3Q15836 100 aa3.25□□□□□ -1.89
LINC00458-201ENST00000423442 ATOH7Q8N100 152 aa3.25□□□□□ -1.89
LINC00458-201ENST00000423442 SPANXDQ9BXN6 97 aa3.25□□□□□ -1.89
LINC00458-201ENST00000423442 KRTAP4-16G5E9R7 235 aaPredicted RBP3.24□□□□□ -1.89
LINC00458-201ENST00000423442 SPINK1P00995 79 aa3.24□□□□□ -1.89
LINC00458-201ENST00000423442 TAL2Q16559 108 aa3.24□□□□□ -1.89
LINC00458-201ENST00000423442 C3orf22Q8N5N4 141 aa3.24□□□□□ -1.89
LINC00458-201ENST00000423442 TRAV13-2A0A0B4J235 113 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 COX7BP24311 80 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 C9orf153Q5TBE3 101 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 SOSTDC1Q6X4U4 206 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 MUSTN1Q8IVN3 82 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 RETNLBQ9BQ08 111 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 TTTY13Q9BZ97 58 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 LAMTOR3Q9UHA4 124 aa3.23□□□□□ -1.89
LINC00458-201ENST00000423442 TRBV7-6A0A0J9YX20 115 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 SLC25A20O43772 301 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 ERC2-IT1O76042 136 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 SNCGO76070 127 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 MOBPQ13875 183 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 LINC00483Q53H64 154 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 DEFB105AQ8NG35 78 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 HIST1H2BLQ99880 126 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 Q9BRP9 147 aa3.22□□□□□ -1.89
LINC00458-201ENST00000423442 C6orf99Q4VX62 202 aa3.21□□□□□ -1.9
LINC00458-201ENST00000423442 FP248Q71RG6 208 aaPredicted RBP3.21□□□□□ -1.9
LINC00458-201ENST00000423442 PCP2Q8IVA1 136 aa3.21□□□□□ -1.9
LINC00458-201ENST00000423442 HIST3H2BBQ8N257 126 aa3.21□□□□□ -1.9
LINC00458-201ENST00000423442 NHP2Q9NX24 153 aaKnown RBP3.21□□□□□ -1.9
LINC00458-201ENST00000423442 TEX49A0A1B0GTD5 131 aa3.2□□□□□ -1.9
LINC00458-201ENST00000423442 ST20-AS1Q8NBB2 130 aa3.2□□□□□ -1.9
LINC00458-201ENST00000423442 HIST1H4GQ99525 98 aa3.2□□□□□ -1.9
LINC00458-201ENST00000423442 ELOF1P60002 83 aaKnown RBP3.19□□□□□ -1.9
LINC00458-201ENST00000423442 PRO1933Q9H354 126 aa3.19□□□□□ -1.9
LINC00458-201ENST00000423442 F8WEM9 126 aa3.18□□□□□ -1.9
LINC00458-201ENST00000423442 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
LINC00458-201ENST00000423442 CXCL6P80162 114 aa3.18□□□□□ -1.9
LINC00458-201ENST00000423442 TPRXLQ17RH7 258 aa3.18□□□□□ -1.9
LINC00458-201ENST00000423442 Q1RN00 199 aa3.18□□□□□ -1.9
LINC00458-201ENST00000423442 HRCT1Q6UXD1 115 aa3.18□□□□□ -1.9
LINC00458-201ENST00000423442 Q8N377 158 aa3.18□□□□□ -1.9
LINC00458-201ENST00000423442 LIMD2Q9BT23 127 aa3.18□□□□□ -1.9
LINC00458-201ENST00000423442 H7C2G1 150 aa3.17□□□□□ -1.9
LINC00458-201ENST00000423442 KRTAP5-8O75690 187 aa3.17□□□□□ -1.9
LINC00458-201ENST00000423442 SPRR1BP22528 89 aa3.17□□□□□ -1.9
LINC00458-201ENST00000423442 SMIM11BQ8TCY0 68 aa3.17□□□□□ -1.9
LINC00458-201ENST00000423442 PRO0461Q9UI25 63 aa3.17□□□□□ -1.9
LINC00458-201ENST00000423442 hADV29S1A0JD25 119 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 COX8AP10176 69 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 CD164Q04900 197 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 BVES-AS1Q5T3Y7 98 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 RAB37Q96AX2 223 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 C12orf57Q99622 126 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 VAMP8Q9BV40 100 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 SNHG12Q9BXW3 62 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 V9GYY9 64 aa3.16□□□□□ -1.9
LINC00458-201ENST00000423442 DLEU1O43261 78 aa3.15□□□□□ -1.91
LINC00458-201ENST00000423442 TCL1BO95988 128 aa3.15□□□□□ -1.91
LINC00458-201ENST00000423442 C14orf144Q96I85 54 aa3.15□□□□□ -1.91
LINC00458-201ENST00000423442 IGLV8-61A0A075B6I0 122 aa3.14□□□□□ -1.91
LINC00458-201ENST00000423442 SPATA45Q537H7 98 aa3.14□□□□□ -1.91
LINC00458-201ENST00000423442 LINC00575Q6W349 94 aa3.14□□□□□ -1.91
LINC00458-201ENST00000423442 H0YGX0 51 aa3.13□□□□□ -1.91
LINC00458-201ENST00000423442 OCIAD2Q56VL3 154 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms