RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 C5orf42Q9H799 3197 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 RGPD1P0DJD0 1748 aa-0.69□□□□□ -2.52
LINC00397-201ENST00000422074 CMYA5Q8N3K9 4069 aa-0.7□□□□□ -2.52
LINC00397-201ENST00000422074 DNAH8Q96JB1 4490 aa-0.7□□□□□ -2.52
LINC00397-201ENST00000422074 USP32Q8NFA0 1604 aa-0.7□□□□□ -2.52
LINC00397-201ENST00000422074 RANBP2P49792 3224 aaKnown RBP-0.7□□□□□ -2.52
LINC00397-201ENST00000422074 LINC00158P58513 81 aa-0.7□□□□□ -2.52
LINC00397-201ENST00000422074 PLGLAQ15195 96 aa-0.7□□□□□ -2.52
LINC00397-201ENST00000422074 EPRSP07814 1512 aaKnown RBP-0.7□□□□□ -2.52
LINC00397-201ENST00000422074 COL12A1Q99715 3063 aa-0.71□□□□□ -2.52
LINC00397-201ENST00000422074 MT1HP80294 61 aa-0.71□□□□□ -2.52
LINC00397-201ENST00000422074 PRLHP81277 87 aa-0.71□□□□□ -2.52
LINC00397-201ENST00000422074 WFDC9Q8NEX5 89 aa-0.71□□□□□ -2.52
LINC00397-201ENST00000422074 DPY30Q9C005 99 aa-0.71□□□□□ -2.52
LINC00397-201ENST00000422074 LTN1O94822 1766 aa-0.71□□□□□ -2.52
LINC00397-201ENST00000422074 PLXNC1O60486 1568 aa-0.71□□□□□ -2.52
LINC00397-201ENST00000422074 FANCAO15360 1455 aa-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 TEX14Q8IWB6 1497 aa-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 DNAH7Q8WXX0 4024 aa-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 HMGN2P05204 90 aaKnown RBP-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 PEA15Q15121 130 aa-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 DEFB106AQ8N104 65 aa-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 TCEAL7Q9BRU2 100 aa-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 NESP48681 1621 aa-0.72□□□□□ -2.52
LINC00397-201ENST00000422074 MYO9AB2RTY4 2548 aa-0.72□□□□□ -2.53
LINC00397-201ENST00000422074 POLR1AO95602 1720 aaPredicted RBP-0.72□□□□□ -2.53
LINC00397-201ENST00000422074 BPTFQ12830 3046 aa-0.72□□□□□ -2.53
LINC00397-201ENST00000422074 ATP10BO94823 1461 aa-0.73□□□□□ -2.53
LINC00397-201ENST00000422074 ATP7BP35670 1465 aa-0.73□□□□□ -2.53
LINC00397-201ENST00000422074 SPTAN1Q13813 2472 aaKnown RBP-0.73□□□□□ -2.53
LINC00397-201ENST00000422074 S100PP25815 95 aa-0.73□□□□□ -2.53
LINC00397-201ENST00000422074 DOT1LQ8TEK3 1739 aa-0.73□□□□□ -2.53
LINC00397-201ENST00000422074 MAGI3Q5TCQ9 1506 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 LRBAP50851 2863 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 NWD1Q149M9 1564 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 DEPDC5O75140 1603 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 TRAV21A0A0B4J279 112 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 NDUFB1O75438 58 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 PLIN4Q96Q06 1357 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 CEP295Q9C0D2 2601 aa-0.74□□□□□ -2.53
LINC00397-201ENST00000422074 WIZO95785 1651 aa-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 DDX60LQ5H9U9 1706 aaKnown RBP-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 IFI6P09912 130 aa-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 ACBD7Q8N6N7 88 aa-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 CNTLNQ9NXG0 1405 aa-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 ITPR1Q14643 2758 aa-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 UBR1Q8IWV7 1749 aa-0.75□□□□□ -2.53
LINC00397-201ENST00000422074 CHD7Q9P2D1 2997 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 SPTBN5Q9NRC6 3674 aaKnown RBP-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 GYPAP02724 150 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 ACYP1P07311 99 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 DEFB130BP0DP73 79 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 DEFB130AP0DP74 79 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 RBP2P50120 134 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 KRTAP19-5Q3LI72 72 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 C14orf144Q96I85 54 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 MYO3AQ8NEV4 1616 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 ZNF831Q5JPB2 1677 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 PARP4Q9UKK3 1724 aaKnown RBP-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 CELSR3Q9NYQ7 3312 aa-0.76□□□□□ -2.53
LINC00397-201ENST00000422074 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.77□□□□□ -2.53
LINC00397-201ENST00000422074 LYNX1G3V0Z9 82 aa-0.77□□□□□ -2.53
LINC00397-201ENST00000422074 IAPPP10997 89 aa-0.77□□□□□ -2.53
LINC00397-201ENST00000422074 COL6A5A8TX70 2615 aa-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 NEXMIFQ5QGS0 1516 aa-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 EYSQ5T1H1 3165 aa-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 MYMXA0A1B0GTQ4 84 aa-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 IFI27P40305 119 aaPredicted RBP-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 MT1XP80297 61 aa-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 CLPSL2Q6UWE3 100 aa-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 DYNC1H1Q14204 4646 aaKnown RBP-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 PLCH1Q4KWH8 1693 aa-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 SPENQ96T58 3664 aaKnown RBP-0.78□□□□□ -2.53
LINC00397-201ENST00000422074 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 LCE6AA0A183 80 aa-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 CEBPZOSA8MTT3 80 aa-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 ATP6V1G2-DDX39BF2Z307 99 aa-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 M0R143 59 aa-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 NCMAPQ5T1S8 102 aa-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 ADGRG4Q8IZF6 3080 aa-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 URB2Q14146 1524 aaKnown RBP-0.79□□□□□ -2.54
LINC00397-201ENST00000422074 CFAP46Q8IYW2 2715 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 PPLO60437 1756 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 ARFGEF2Q9Y6D5 1785 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 LY75O60449 1722 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 CDC42BPAQ5VT25 1732 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 ANKRD26Q9UPS8 1709 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 TOGARAM1Q9Y4F4 1720 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 C20orf78Q9BR46 151 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 AKAP12Q02952 1782 aa-0.8□□□□□ -2.54
LINC00397-201ENST00000422074 CEP162Q5TB80 1403 aa-0.81□□□□□ -2.54
LINC00397-201ENST00000422074 ITSN1Q15811 1721 aa-0.81□□□□□ -2.54
LINC00397-201ENST00000422074 UMAD1C9J7I0 102 aa-0.81□□□□□ -2.54
LINC00397-201ENST00000422074 SMR3BP02814 79 aaPredicted RBP-0.81□□□□□ -2.54
LINC00397-201ENST00000422074 SNRPFP62306 86 aaKnown RBP-0.81□□□□□ -2.54
LINC00397-201ENST00000422074 RABAC1Q9UI14 185 aa-0.81□□□□□ -2.54
LINC00397-201ENST00000422074 CCDC88BA6NC98 1476 aa-0.81□□□□□ -2.54
LINC00397-201ENST00000422074 NCOA2Q15596 1464 aa-0.81□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms