RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 KRTAP13-3Q3SY46 172 aa12□□□□□ -0.49
CPNE1-211ENST00000420363 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12□□□□□ -0.49
CPNE1-211ENST00000420363 KRTAP9-2Q9BYQ4 174 aa11.99□□□□□ -0.49
CPNE1-211ENST00000420363 PPDPFLQ8WWR9 84 aa11.98□□□□□ -0.49
CPNE1-211ENST00000420363 H7C2G1 150 aa11.97□□□□□ -0.49
CPNE1-211ENST00000420363 F8WEM9 126 aa11.96□□□□□ -0.49
CPNE1-211ENST00000420363 FXYD2P54710 66 aa11.96□□□□□ -0.49
CPNE1-211ENST00000420363 FAT4Q6V0I7 4981 aa11.96□□□□□ -0.5
CPNE1-211ENST00000420363 HSD52Q0P140 79 aa11.95□□□□□ -0.5
CPNE1-211ENST00000420363 Q5XG85 94 aa11.95□□□□□ -0.5
CPNE1-211ENST00000420363 HRCT1Q6UXD1 115 aa11.95□□□□□ -0.5
CPNE1-211ENST00000420363 H0YGX0 51 aa11.94□□□□□ -0.5
CPNE1-211ENST00000420363 PRO1854Q9UHT4 67 aa11.94□□□□□ -0.5
CPNE1-211ENST00000420363 MUC17Q685J3 4493 aa11.94□□□□□ -0.5
CPNE1-211ENST00000420363 LCE2AQ5TA79 106 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-211ENST00000420363 IGLV8-61A0A075B6I0 122 aa11.92□□□□□ -0.5
CPNE1-211ENST00000420363 SNCGO76070 127 aa11.92□□□□□ -0.5
CPNE1-211ENST00000420363 UQCR10Q9UDW1 63 aa11.92□□□□□ -0.5
CPNE1-211ENST00000420363 OCIAD2Q56VL3 154 aa11.9□□□□□ -0.5
CPNE1-211ENST00000420363 Q6JHZ5 121 aa11.9□□□□□ -0.5
CPNE1-211ENST00000420363 A0A1B0GX51 115 aa11.88□□□□□ -0.51
CPNE1-211ENST00000420363 CLEC2BQ92478 149 aa11.86□□□□□ -0.51
CPNE1-211ENST00000420363 FAM218AQ96MZ4 157 aa11.86□□□□□ -0.51
CPNE1-211ENST00000420363 A0A0G2JQZ4 141 aa11.85□□□□□ -0.51
CPNE1-211ENST00000420363 TRIAP1O43715 76 aa11.83□□□□□ -0.52
CPNE1-211ENST00000420363 SNHG12Q9BXW3 62 aa11.83□□□□□ -0.52
CPNE1-211ENST00000420363 GHRHP01286 108 aa11.82□□□□□ -0.52
CPNE1-211ENST00000420363 IGFL1Q6UW32 110 aa11.82□□□□□ -0.52
CPNE1-211ENST00000420363 TCL1BO95988 128 aa11.81□□□□□ -0.52
CPNE1-211ENST00000420363 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
CPNE1-211ENST00000420363 XP32Q5T750 250 aa11.79□□□□□ -0.52
CPNE1-211ENST00000420363 C1orf195Q5TG92 126 aa11.79□□□□□ -0.52
CPNE1-211ENST00000420363 K7ERJ3 54 aa11.78□□□□□ -0.52
CPNE1-211ENST00000420363 TRBV7-7A0A0K0K1E9 115 aa11.76□□□□□ -0.53
CPNE1-211ENST00000420363 SMIM6P0DI80 62 aa11.75□□□□□ -0.53
CPNE1-211ENST00000420363 SEC61BP60468 96 aaKnown RBP11.75□□□□□ -0.53
CPNE1-211ENST00000420363 H3BUT2 72 aa11.74□□□□□ -0.53
CPNE1-211ENST00000420363 COX6CP09669 75 aa11.74□□□□□ -0.53
CPNE1-211ENST00000420363 PSMB2P49721 201 aa11.73□□□□□ -0.53
CPNE1-211ENST00000420363 NDUFV3P56181 108 aaKnown RBP11.73□□□□□ -0.53
CPNE1-211ENST00000420363 DNAL4O96015 105 aa11.71□□□□□ -0.53
CPNE1-211ENST00000420363 Q6Q795 121 aa11.71□□□□□ -0.53
CPNE1-211ENST00000420363 H3BQ85 93 aa11.7□□□□□ -0.54
CPNE1-211ENST00000420363 KRTAP9-6A0A140TA67 174 aa11.69□□□□□ -0.54
CPNE1-211ENST00000420363 C9orf92A6NGG3 77 aa11.67□□□□□ -0.54
CPNE1-211ENST00000420363 FABP2P12104 132 aa11.67□□□□□ -0.54
CPNE1-211ENST00000420363 ORMDL1Q9P0S3 153 aa11.67□□□□□ -0.54
CPNE1-211ENST00000420363 TEN1Q86WV5 123 aa11.66□□□□□ -0.54
CPNE1-211ENST00000420363 H3BMG7 143 aa11.65□□□□□ -0.54
CPNE1-211ENST00000420363 SS18L2Q9UHA2 77 aa11.65□□□□□ -0.54
CPNE1-211ENST00000420363 M0R143 59 aa11.64□□□□□ -0.55
CPNE1-211ENST00000420363 TRACP01848 142 aa11.62□□□□□ -0.55
CPNE1-211ENST00000420363 TMEM256-PLSCR3K7ERE1 68 aa11.61□□□□□ -0.55
CPNE1-211ENST00000420363 LST1O00453 97 aa11.6□□□□□ -0.55
CPNE1-211ENST00000420363 SCGB1C2P0DMR2 95 aa11.57□□□□□ -0.56
CPNE1-211ENST00000420363 KRTAP4-1Q9BYQ7 146 aa11.56□□□□□ -0.56
CPNE1-211ENST00000420363 TSTD3H0UI37 97 aa11.55□□□□□ -0.56
CPNE1-211ENST00000420363 UBE2V1Q13404 147 aa11.55□□□□□ -0.56
CPNE1-211ENST00000420363 A0A087WSZ3 146 aa11.54□□□□□ -0.56
CPNE1-211ENST00000420363 A0A1W2PNM2 257 aa11.53□□□□□ -0.56
CPNE1-211ENST00000420363 ANKRD29Q8N6D5 301 aa11.52□□□□□ -0.57
CPNE1-211ENST00000420363 LOC105371267A0A1B0GV96 52 aa11.51□□□□□ -0.57
CPNE1-211ENST00000420363 RPL37P61927 97 aaKnown RBP11.51□□□□□ -0.57
CPNE1-211ENST00000420363 PCOTHQ58A44 107 aa11.51□□□□□ -0.57
CPNE1-211ENST00000420363 TRBV7-4A0A0J9YYF1 115 aa11.5□□□□□ -0.57
CPNE1-211ENST00000420363 Q96NJ1 140 aa11.47□□□□□ -0.57
CPNE1-211ENST00000420363 A0A1B0GV72 72 aa11.46□□□□□ -0.57
CPNE1-211ENST00000420363 ATXN8Q156A1 80 aa11.45□□□□□ -0.58
CPNE1-211ENST00000420363 CCKP06307 115 aa11.43□□□□□ -0.58
CPNE1-211ENST00000420363 LYRM7Q5U5X0 104 aa11.43□□□□□ -0.58
CPNE1-211ENST00000420363 LCE2DQ5TA82 110 aaPredicted RBP11.42□□□□□ -0.58
CPNE1-211ENST00000420363 OBSCN-AS1Q96MR7 158 aa11.42□□□□□ -0.58
CPNE1-211ENST00000420363 BAALC-AS2P0C853 105 aa11.41□□□□□ -0.58
CPNE1-211ENST00000420363 RBM3P98179 157 aaKnown RBP11.41□□□□□ -0.58
CPNE1-211ENST00000420363 NAA38Q9BRA0 125 aaKnown RBP11.4□□□□□ -0.58
CPNE1-211ENST00000420363 Q75L30 129 aa11.39□□□□□ -0.59
CPNE1-211ENST00000420363 DSCR8Q96T75 97 aa11.39□□□□□ -0.59
CPNE1-211ENST00000420363 BATFQ16520 125 aa11.35□□□□□ -0.59
CPNE1-211ENST00000420363 SIGMAR1Q99720 223 aa11.35□□□□□ -0.59
CPNE1-211ENST00000420363 TRBV20-1A0A075B6N2 111 aa11.34□□□□□ -0.59
CPNE1-211ENST00000420363 C21orf62-AS1Q17RA5 79 aa11.34□□□□□ -0.59
CPNE1-211ENST00000420363 LINC00472Q9H8W2 130 aa11.33□□□□□ -0.6
CPNE1-211ENST00000420363 C9JAW5 83 aa11.32□□□□□ -0.6
CPNE1-211ENST00000420363 JMJD7-PLA2G4BH0Y9G9 81 aa11.32□□□□□ -0.6
CPNE1-211ENST00000420363 C20orf166-AS1Q96NR2 134 aa11.32□□□□□ -0.6
CPNE1-211ENST00000420363 LCE2CQ5TA81 110 aa11.31□□□□□ -0.6
CPNE1-211ENST00000420363 VPS25Q9BRG1 176 aa11.31□□□□□ -0.6
CPNE1-211ENST00000420363 FSIP2Q5CZC0 6907 aa11.3□□□□□ -0.6
CPNE1-211ENST00000420363 IGKV4-1P06312 121 aa11.3□□□□□ -0.6
CPNE1-211ENST00000420363 KRTAP19-2Q3LHN2 52 aa11.29□□□□□ -0.6
CPNE1-211ENST00000420363 ATP11AUNQ6ZP68 121 aa11.28□□□□□ -0.6
CPNE1-211ENST00000420363 CRCT1Q9UGL9 99 aa11.28□□□□□ -0.6
CPNE1-211ENST00000420363 C9orf118A6NHY6 69 aa11.27□□□□□ -0.61
CPNE1-211ENST00000420363 A8MUU9 505 aa11.27□□□□□ -0.61
CPNE1-211ENST00000420363 LOC110117498A0A087WWA1 95 aa11.26□□□□□ -0.61
CPNE1-211ENST00000420363 A0A1B0GW54 56 aa11.26□□□□□ -0.61
CPNE1-211ENST00000420363 TAX1BP3O14907 124 aa11.25□□□□□ -0.61
CPNE1-211ENST00000420363 PDE6GP18545 87 aa11.25□□□□□ -0.61
CPNE1-211ENST00000420363 DSCR10P59022 87 aa11.25□□□□□ -0.61
CPNE1-211ENST00000420363 Q6ZQT0 140 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms