RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 BCE1O60756 84 aa12.95□□□□□ -0.34
GPC1-202ENST00000420138 KRTAP13-1Q8IUC0 172 aa12.95□□□□□ -0.34
GPC1-202ENST00000420138 KRTAP10-1P60331 282 aa12.94□□□□□ -0.34
GPC1-202ENST00000420138 Q6ZSA8 131 aa12.92□□□□□ -0.34
GPC1-202ENST00000420138 HIGD2AQ9BW72 106 aa12.92□□□□□ -0.34
GPC1-202ENST00000420138 A0A1B0GVY2 172 aa12.9□□□□□ -0.34
GPC1-202ENST00000420138 HIST1H4AP62805 103 aaKnown RBP12.89□□□□□ -0.35
GPC1-202ENST00000420138 C3orf22Q8N5N4 141 aa12.89□□□□□ -0.35
GPC1-202ENST00000420138 CIRBP-AS1Q8TBR5 109 aa12.89□□□□□ -0.35
GPC1-202ENST00000420138 PSORS1C2Q9UIG4 136 aa12.89□□□□□ -0.35
GPC1-202ENST00000420138 UBE2AP49459 152 aa12.88□□□□□ -0.35
GPC1-202ENST00000420138 Q6ZVQ6 151 aa12.88□□□□□ -0.35
GPC1-202ENST00000420138 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
GPC1-202ENST00000420138 SCXQ7RTU7 201 aa12.84□□□□□ -0.35
GPC1-202ENST00000420138 A0A087WVE0 104 aa12.83□□□□□ -0.35
GPC1-202ENST00000420138 CCDC179H3BU77 68 aa12.83□□□□□ -0.36
GPC1-202ENST00000420138 ATOX1O00244 68 aa12.82□□□□□ -0.36
GPC1-202ENST00000420138 LRP1BQ9NZR2 4599 aa12.81□□□□□ -0.36
GPC1-202ENST00000420138 HAMPP81172 84 aa12.81□□□□□ -0.36
GPC1-202ENST00000420138 RYR3Q15413 4870 aa12.8□□□□□ -0.36
GPC1-202ENST00000420138 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
GPC1-202ENST00000420138 SRRM2Q9UQ35 2752 aaKnown RBP12.79□□□□□ -0.36
GPC1-202ENST00000420138 SPRR1BP22528 89 aa12.79□□□□□ -0.36
GPC1-202ENST00000420138 CXCL6P80162 114 aa12.79□□□□□ -0.36
GPC1-202ENST00000420138 PKHD1P08F94 4074 aa12.78□□□□□ -0.36
GPC1-202ENST00000420138 A0A1B0GW54 56 aa12.75□□□□□ -0.37
GPC1-202ENST00000420138 ZNF861PO60384 105 aa12.74□□□□□ -0.37
GPC1-202ENST00000420138 DYNC1H1Q14204 4646 aaKnown RBP12.74□□□□□ -0.37
GPC1-202ENST00000420138 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
GPC1-202ENST00000420138 NREPQ16612 68 aa12.72□□□□□ -0.37
GPC1-202ENST00000420138 A0A1W2PNM2 257 aa12.71□□□□□ -0.38
GPC1-202ENST00000420138 F8WEM9 126 aa12.71□□□□□ -0.38
GPC1-202ENST00000420138 UQCRQO14949 82 aa12.71□□□□□ -0.38
GPC1-202ENST00000420138 IGLV8-61A0A075B6I0 122 aa12.7□□□□□ -0.38
GPC1-202ENST00000420138 COX7CP15954 63 aa12.7□□□□□ -0.38
GPC1-202ENST00000420138 SPRR4Q96PI1 79 aa12.7□□□□□ -0.38
GPC1-202ENST00000420138 Q8NBF4 154 aa12.69□□□□□ -0.38
GPC1-202ENST00000420138 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
GPC1-202ENST00000420138 SERP2Q8N6R1 65 aa12.66□□□□□ -0.38
GPC1-202ENST00000420138 A0A0G2JQZ4 141 aa12.65□□□□□ -0.39
GPC1-202ENST00000420138 IGFL1Q6UW32 110 aa12.65□□□□□ -0.39
GPC1-202ENST00000420138 C9orf153Q5TBE3 101 aa12.62□□□□□ -0.39
GPC1-202ENST00000420138 ZNF706Q9Y5V0 76 aaPredicted RBP12.62□□□□□ -0.39
GPC1-202ENST00000420138 BPY2O14599 106 aa12.61□□□□□ -0.39
GPC1-202ENST00000420138 CRYGAP11844 174 aa12.6□□□□□ -0.39
GPC1-202ENST00000420138 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
GPC1-202ENST00000420138 ANAPC11Q9NYG5 84 aa12.58□□□□□ -0.4
GPC1-202ENST00000420138 VPS13BQ7Z7G8 4022 aa12.55□□□□□ -0.4
GPC1-202ENST00000420138 IGKV4-1P06312 121 aa12.55□□□□□ -0.4
GPC1-202ENST00000420138 SMIM20Q8N5G0 67 aa12.53□□□□□ -0.4
GPC1-202ENST00000420138 Q8N9L7 120 aa12.53□□□□□ -0.4
GPC1-202ENST00000420138 SS18L2Q9UHA2 77 aa12.53□□□□□ -0.4
GPC1-202ENST00000420138 IGLV9-49A0A0B4J1Y8 123 aa12.52□□□□□ -0.41
GPC1-202ENST00000420138 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
GPC1-202ENST00000420138 TRAV7A0A075B6U4 112 aa12.5□□□□□ -0.41
GPC1-202ENST00000420138 RPL37AP61513 92 aaKnown RBP12.46□□□□□ -0.41
GPC1-202ENST00000420138 MOBPQ13875 183 aa12.45□□□□□ -0.42
GPC1-202ENST00000420138 A0A087WSZ3 146 aa12.44□□□□□ -0.42
GPC1-202ENST00000420138 FAT1Q14517 4588 aa12.43□□□□□ -0.42
GPC1-202ENST00000420138 CDK2AP2O75956 126 aa12.43□□□□□ -0.42
GPC1-202ENST00000420138 DSCR10P59022 87 aa12.43□□□□□ -0.42
GPC1-202ENST00000420138 KRTAP1-4P0C5Y4 121 aa12.41□□□□□ -0.42
GPC1-202ENST00000420138 KRTAP10-4P60372 401 aaPredicted RBP12.39□□□□□ -0.43
GPC1-202ENST00000420138 CYSTM1Q9H1C7 97 aa12.39□□□□□ -0.43
GPC1-202ENST00000420138 A0A087X002 238 aa12.38□□□□□ -0.43
GPC1-202ENST00000420138 C20orf197Q8N268 126 aa12.37□□□□□ -0.43
GPC1-202ENST00000420138 K7EQZ3 153 aa12.36□□□□□ -0.43
GPC1-202ENST00000420138 KRTAP13-2Q52LG2 175 aa12.35□□□□□ -0.43
GPC1-202ENST00000420138 FAM229BQ4G0N7 80 aa12.34□□□□□ -0.43
GPC1-202ENST00000420138 SPINK6Q6UWN8 80 aa12.34□□□□□ -0.43
GPC1-202ENST00000420138 EPPK1P58107 5090 aaKnown RBP12.33□□□□□ -0.44
GPC1-202ENST00000420138 DEFB116Q30KQ4 102 aa12.32□□□□□ -0.44
GPC1-202ENST00000420138 HRCT1Q6UXD1 115 aa12.32□□□□□ -0.44
GPC1-202ENST00000420138 FAM229AH3BQW9 127 aa12.32□□□□□ -0.44
GPC1-202ENST00000420138 SSBP3-AS1Q7Z2R9 100 aa12.32□□□□□ -0.44
GPC1-202ENST00000420138 OCR1Q9BZK8 76 aa12.32□□□□□ -0.44
GPC1-202ENST00000420138 TMEM258P61165 79 aa12.3□□□□□ -0.44
GPC1-202ENST00000420138 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
GPC1-202ENST00000420138 LINC00472Q9H8W2 130 aa12.29□□□□□ -0.44
GPC1-202ENST00000420138 KLKP1Q107X0 134 aa12.28□□□□□ -0.44
GPC1-202ENST00000420138 HCG22E2RYF7 251 aa12.26□□□□□ -0.45
GPC1-202ENST00000420138 HSPG2P98160 4391 aa12.25□□□□□ -0.45
GPC1-202ENST00000420138 Q5VSD8 79 aa12.25□□□□□ -0.45
GPC1-202ENST00000420138 Q96NJ1 140 aa12.23□□□□□ -0.45
GPC1-202ENST00000420138 CD164Q04900 197 aa12.23□□□□□ -0.45
GPC1-202ENST00000420138 SNURFQ9Y675 71 aa12.23□□□□□ -0.45
GPC1-202ENST00000420138 RYR1P21817 5038 aa12.22□□□□□ -0.45
GPC1-202ENST00000420138 A8MWP4 228 aa12.21□□□□□ -0.46
GPC1-202ENST00000420138 J3KT08 172 aa12.21□□□□□ -0.46
GPC1-202ENST00000420138 TMEM254Q8TBM7 123 aa12.21□□□□□ -0.46
GPC1-202ENST00000420138 H7BZZ5 65 aa12.19□□□□□ -0.46
GPC1-202ENST00000420138 PRR15Q8IV56 129 aa12.19□□□□□ -0.46
GPC1-202ENST00000420138 NDUFC1O43677 76 aa12.16□□□□□ -0.46
GPC1-202ENST00000420138 KIAA1109Q2LD37 5005 aa12.16□□□□□ -0.46
GPC1-202ENST00000420138 WFDC13Q8IUB5 93 aa12.15□□□□□ -0.46
GPC1-202ENST00000420138 Q8N1X5 172 aa12.15□□□□□ -0.46
GPC1-202ENST00000420138 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
GPC1-202ENST00000420138 A0A0U1RQV1 116 aa12.14□□□□□ -0.47
GPC1-202ENST00000420138 PRR26Q8N8Z3 221 aa12.14□□□□□ -0.47
GPC1-202ENST00000420138 TYMSOSQ8TAI1 123 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms