RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CSAG1Q6PB30 78 aa10.25□□□□□ -0.77
SYNGAP1-202ENST00000418600 ZCCHC13Q8WW36 166 aaKnown RBP10.24□□□□□ -0.77
SYNGAP1-202ENST00000418600 S4R3F8 94 aa10.24□□□□□ -0.77
SYNGAP1-202ENST00000418600 A0A1B0GU33 70 aa10.22□□□□□ -0.77
SYNGAP1-202ENST00000418600 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
SYNGAP1-202ENST00000418600 RANBP2P49792 3224 aaKnown RBP10.2□□□□□ -0.78
SYNGAP1-202ENST00000418600 PCNTO95613 3336 aa10.19□□□□□ -0.78
SYNGAP1-202ENST00000418600 UNC79Q9P2D8 2635 aa10.19□□□□□ -0.78
SYNGAP1-202ENST00000418600 KRTAP26-1Q6PEX3 210 aa10.18□□□□□ -0.78
SYNGAP1-202ENST00000418600 SETXQ7Z333 2677 aaKnown RBP10.14□□□□□ -0.79
SYNGAP1-202ENST00000418600 DMAC1Q96GE9 116 aa10.14□□□□□ -0.79
SYNGAP1-202ENST00000418600 SPRR1AP35321 89 aa10.13□□□□□ -0.79
SYNGAP1-202ENST00000418600 PANO1I0J062 215 aa10.13□□□□□ -0.79
SYNGAP1-202ENST00000418600 OCR1Q9BZK8 76 aa10.11□□□□□ -0.79
SYNGAP1-202ENST00000418600 GCN1Q92616 2671 aaKnown RBP10.1□□□□□ -0.79
SYNGAP1-202ENST00000418600 Q6ZRN7 208 aaPredicted RBP10.1□□□□□ -0.79
SYNGAP1-202ENST00000418600 LAMA3Q16787 3333 aa10.1□□□□□ -0.79
SYNGAP1-202ENST00000418600 BPTFQ12830 3046 aa10.08□□□□□ -0.8
SYNGAP1-202ENST00000418600 SPRR1BP22528 89 aa10.07□□□□□ -0.8
SYNGAP1-202ENST00000418600 MKI67P46013 3256 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-202ENST00000418600 PRRC2CQ9Y520 2896 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-202ENST00000418600 SPINK7P58062 85 aa10.05□□□□□ -0.8
SYNGAP1-202ENST00000418600 COL6A5A8TX70 2615 aa10.02□□□□□ -0.81
SYNGAP1-202ENST00000418600 R4GN34 69 aa10.02□□□□□ -0.81
SYNGAP1-202ENST00000418600 Q75L30 129 aa10.01□□□□□ -0.81
SYNGAP1-202ENST00000418600 TEX15Q9BXT5 2789 aa10.01□□□□□ -0.81
SYNGAP1-202ENST00000418600 MMP24-AS1A0A0U1RRL7 71 aa10.01□□□□□ -0.81
SYNGAP1-202ENST00000418600 MGAQ8IWI9 3026 aa10□□□□□ -0.81
SYNGAP1-202ENST00000418600 TNRC18O15417 2968 aaPredicted RBP10□□□□□ -0.81
SYNGAP1-202ENST00000418600 A0A087X002 238 aa9.97□□□□□ -0.81
SYNGAP1-202ENST00000418600 LINC01558Q9Y6Z2 57 aa9.97□□□□□ -0.81
SYNGAP1-202ENST00000418600 Q8NDZ9 215 aa9.96□□□□□ -0.82
SYNGAP1-202ENST00000418600 CENPEQ02224 2701 aa9.92□□□□□ -0.82
SYNGAP1-202ENST00000418600 Q5W150 140 aa9.92□□□□□ -0.82
SYNGAP1-202ENST00000418600 DSPP15924 2871 aaKnown RBP9.92□□□□□ -0.82
SYNGAP1-202ENST00000418600 PLAC4Q8WY50 150 aa9.91□□□□□ -0.82
SYNGAP1-202ENST00000418600 RPS29P62273 56 aaKnown RBP9.9□□□□□ -0.82
SYNGAP1-202ENST00000418600 Q8N9P0 234 aaPredicted RBP9.9□□□□□ -0.82
SYNGAP1-202ENST00000418600 A0A0A0MQY5 61 aa9.9□□□□□ -0.82
SYNGAP1-202ENST00000418600 BRCA2P51587 3418 aa9.88□□□□□ -0.83
SYNGAP1-202ENST00000418600 STAB1Q9NY15 2570 aa9.87□□□□□ -0.83
SYNGAP1-202ENST00000418600 CHD6Q8TD26 2715 aa9.86□□□□□ -0.83
SYNGAP1-202ENST00000418600 LINC00472Q9H8W2 130 aa9.85□□□□□ -0.83
SYNGAP1-202ENST00000418600 ITPR2Q14571 2701 aa9.83□□□□□ -0.84
SYNGAP1-202ENST00000418600 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
SYNGAP1-202ENST00000418600 RPL37P61927 97 aaKnown RBP9.79□□□□□ -0.84
SYNGAP1-202ENST00000418600 KMT2BQ9UMN6 2715 aaPredicted RBP9.77□□□□□ -0.85
SYNGAP1-202ENST00000418600 M0QZ58 72 aa9.77□□□□□ -0.85
SYNGAP1-202ENST00000418600 ROMO1P60602 79 aa9.72□□□□□ -0.85
SYNGAP1-202ENST00000418600 CDH23Q9H251 3354 aa9.7□□□□□ -0.86
SYNGAP1-202ENST00000418600 H1FX-AS1Q4G0G2 97 aa9.68□□□□□ -0.86
SYNGAP1-202ENST00000418600 KRTAP11-1Q8IUC1 163 aa9.68□□□□□ -0.86
SYNGAP1-202ENST00000418600 KRTAP13-2Q52LG2 175 aa9.66□□□□□ -0.86
SYNGAP1-202ENST00000418600 C20orf166-AS1Q96NR2 134 aa9.66□□□□□ -0.86
SYNGAP1-202ENST00000418600 KRTAP4-16G5E9R7 235 aaPredicted RBP9.66□□□□□ -0.86
SYNGAP1-202ENST00000418600 WDFY4Q6ZS81 3184 aa9.65□□□□□ -0.86
SYNGAP1-202ENST00000418600 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
SYNGAP1-202ENST00000418600 HIVEP1P15822 2718 aa9.63□□□□□ -0.87
SYNGAP1-202ENST00000418600 Q5VV11 94 aa9.62□□□□□ -0.87
SYNGAP1-202ENST00000418600 ASB16-AS1Q495Z4 193 aa9.59□□□□□ -0.87
SYNGAP1-202ENST00000418600 SZT2Q5T011 3432 aa9.58□□□□□ -0.88
SYNGAP1-202ENST00000418600 PRAC1Q96KF2 57 aa9.55□□□□□ -0.88
SYNGAP1-202ENST00000418600 KRTAP29-1A8MX34 341 aaPredicted RBP9.55□□□□□ -0.88
SYNGAP1-202ENST00000418600 NOTCH1P46531 2555 aa9.53□□□□□ -0.88
SYNGAP1-202ENST00000418600 CFAP54Q96N23 3096 aa9.51□□□□□ -0.89
SYNGAP1-202ENST00000418600 Q5XG85 94 aa9.5□□□□□ -0.89
SYNGAP1-202ENST00000418600 TENM4Q6N022 2769 aa9.49□□□□□ -0.89
SYNGAP1-202ENST00000418600 KRTAP13-1Q8IUC0 172 aa9.49□□□□□ -0.89
SYNGAP1-202ENST00000418600 A0A1B0GVY2 172 aa9.49□□□□□ -0.89
SYNGAP1-202ENST00000418600 EYSQ5T1H1 3165 aa9.48□□□□□ -0.89
SYNGAP1-202ENST00000418600 KRTAP7-1Q8IUC3 87 aa9.48□□□□□ -0.89
SYNGAP1-202ENST00000418600 NSD1Q96L73 2696 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-202ENST00000418600 UNC80Q8N2C7 3258 aa9.47□□□□□ -0.89
SYNGAP1-202ENST00000418600 COL6A3P12111 3177 aa9.46□□□□□ -0.89
SYNGAP1-202ENST00000418600 XIRP2A4UGR9 3374 aa9.46□□□□□ -0.9
SYNGAP1-202ENST00000418600 NBEAL1Q6ZS30 2694 aa9.45□□□□□ -0.9
SYNGAP1-202ENST00000418600 MAP1AP78559 2803 aaPredicted RBP9.44□□□□□ -0.9
SYNGAP1-202ENST00000418600 SPTBN5Q9NRC6 3674 aaKnown RBP9.44□□□□□ -0.9
SYNGAP1-202ENST00000418600 A0A0C4DFX4 3053 aa9.43□□□□□ -0.9
SYNGAP1-202ENST00000418600 UTP20O75691 2785 aaKnown RBP9.41□□□□□ -0.9
SYNGAP1-202ENST00000418600 UBR5O95071 2799 aaPredicted RBP9.41□□□□□ -0.9
SYNGAP1-202ENST00000418600 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
SYNGAP1-202ENST00000418600 TPRXLQ17RH7 258 aa9.39□□□□□ -0.91
SYNGAP1-202ENST00000418600 SPATA8Q6RVD6 105 aa9.37□□□□□ -0.91
SYNGAP1-202ENST00000418600 A8MUU9 505 aa9.37□□□□□ -0.91
SYNGAP1-202ENST00000418600 FRYQ5TBA9 3013 aa9.36□□□□□ -0.91
SYNGAP1-202ENST00000418600 APCP25054 2843 aa9.35□□□□□ -0.91
SYNGAP1-202ENST00000418600 XP32Q5T750 250 aa9.34□□□□□ -0.91
SYNGAP1-202ENST00000418600 NOTCH2NLQ7Z3S9 236 aa9.33□□□□□ -0.92
SYNGAP1-202ENST00000418600 H3BS24 57 aa9.33□□□□□ -0.92
SYNGAP1-202ENST00000418600 CRYBG3Q68DQ2 2970 aa9.33□□□□□ -0.92
SYNGAP1-202ENST00000418600 CYSTM1Q9H1C7 97 aa9.32□□□□□ -0.92
SYNGAP1-202ENST00000418600 TRIOO75962 3097 aa9.32□□□□□ -0.92
SYNGAP1-202ENST00000418600 FLNCQ14315 2725 aa9.32□□□□□ -0.92
SYNGAP1-202ENST00000418600 STAB2Q8WWQ8 2551 aa9.29□□□□□ -0.92
SYNGAP1-202ENST00000418600 KRTAP1-4P0C5Y4 121 aa9.28□□□□□ -0.92
SYNGAP1-202ENST00000418600 FLG2Q5D862 2391 aaPredicted RBP9.26□□□□□ -0.93
SYNGAP1-202ENST00000418600 FRYLO94915 3013 aa9.25□□□□□ -0.93
SYNGAP1-202ENST00000418600 DMXL2Q8TDJ6 3036 aa9.25□□□□□ -0.93
SYNGAP1-202ENST00000418600 ATMQ13315 3056 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 263.6 ms